cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4887 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4887 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4887 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4887 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 SEKPSIFSSD I LEHDFPDFCV Site 2800
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ------SDEP V CMTPFSFDFE Site 2492
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 SPRTDHTNNL E IDEAMNPLNP Site 2493
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - -RATSLSRAA  
Chlamydomonas.reinhardtii.LF4 VGGGGGGAVG V GGVGVNKYKA Site 2789
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g LFNFNLAELS I RPNLNKAILP Site 2493
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - -MLKQKTHQG  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - -NAQPTANDE  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho MTSDYQRSNP H AAYPNPGPST Site 2523
Schizosaccharomyces.octosporus.b.IME2 PVRRNHGAPD F QASRSISCQA Site 2770
Candida.albicans.MAPK3..Extracellular.signal.regul --------DE P ISDKIPEDFF Site 2492
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - -SKQNVVSNS  
Suberites.domuncula.JNK..Stress.activated.protein. ---------A E VHAPPPKRYD Site 2238
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei LLTSASVAPA Q YQHQFATQSY Site 2900
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar RPAKLTRKHV P GFQYLPQLSS Site 2493
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ----DEPVAE V PFRINMENDD Site 2490
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - -DNADAPMDH  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - -LNNKRLESN  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - -TTTTSSSNP  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ----VHQLED T ASIFSLKEIQ Site 2494
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. TQQFSLVQNN F HWYTTVLIGT Site 2495
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET GAAVNSSESL P PSSSINDISS Site 2492
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 KKCSIPFVKP N RHSPSGIYNI Site 2731
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U GAAVNSSESP P PSSSINDISS Site 2492
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. EAQQPFDDSL E HEKLTVDEWK Site 2497
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo IHQFILEQQK G NRVPLCINPQ Site 2492
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar HPRYLKKENK T VSESRVPSLA Site 2745
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. GAAVTDGSQA H TSSSSGDASS Site 2492
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d GPGTTGASSS G AGLHWGGPTQ Site 2799
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. TGANGKVPVL R PLKCAAVNKK Site 2530
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - -TKLPSGNPL  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - -TKLPNNKDL  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - -MLKQKTHQG  
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - -PRNSPGEAG  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO VIPSHPLPAH I QIPTQYSQFG Site 2899
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl IHQFILEQQK G NRVPLCINPQ Site 2492
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 SRKHHCFTET S KLQYLPQLTG Site 2493
Homo.sapiens.HIPK3..Homeodomain.interacting.protei NPRLLPSPTI H QTQYKPIFPP Site 2900
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O RGTSPRPPEG G LGYSQLGDDD Site 2495
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d HVSALNRAEG A PYPDQLANKG Site 2891
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O RGTSPRPPEG G LGYSQLGDDD Site 2495
Naegleria.gruberi.LF4 TTTTYNNFQS N KAPPIFQNNV Site 2718
Saccharomyces.bayanus.IME2 DASLGDSFNS M PDFTPRNFLI Site 2715
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a EETEAPPYDH S LDEADQSLEQ Site 2258
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --VLAQVQQQ L LQKQQQQQQQ Site 2493
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d EPTPKGRPAL Q LPGSSLLRYN Site 2870
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a GRRMFGISVS Q GAQGAARAAL Site 2727
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific RILNELVALQ S PNSIARAASN Site 2493
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 AAPNRRLPLS D EKSATSATRQ Site 2767
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se KMYQFVMDRP A LYGVALCINP Site 2492
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. STKTGRGQFS G RTYNPTAKNL Site 2760
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. GAAVNSSESL P PSSSVNDISS Site 2492
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --SRLPNGRF L PPLFNFKSHE Site 2494
Penicillium.marneffei.IME2 DNTPVRQRDV T KIPEDTSSRQ Site 2770
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----DEPEAD  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a VFISRALKLC T KPEDLPDNKL Site 2763
Drosophila.melanogaster.MAK APNAQKEKPA V ASSFPWDESN Site 2764
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ELGPGTTGAN S SGTTLQWGGP Site 2797
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - -----CEPEL  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin GAAVNSSESL P PSSSVNDISS Site 2492
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a DAAVSSNATP S QSSSINDISS Site 2490
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - -MLKQKTHQG  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p --WTTSPFLN Q PIHYPERRIS Site 2493
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen NAILIPPHLR S PAGTTTLTPS Site 2493
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. QIYDAQLEER E HAIEEWKELI Site 2492
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a VFISRALKLC T KPEDLPENKL Site 2763
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ----HKLPDT T SIFALKEVQL Site 2493
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein NVFERQEYKY P PRRISCEDSD Site 2493
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. GEKLSVEEWR K YTYEEVINYT Site 2492
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ---RTRLPNG  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SASPSTTSSS S STPNSIPVQS Site 2528
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---TPGPQLP R PNSSTEALKE Site 2493
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str GSCSSAGPST I LLVDGEHTVE Site 2493
Debaryomyces.hansenii.IME2 LDITNNDSVN N TEQYIPNNLA Site 2730
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------T R LPNGRSLPPL Site 2492
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin NSSIGGLGVN R RILAAAAAAA Site 2492
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - FTQNRPSVAK  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de LPIPQRPGGP A PKAHPGPPHV Site 2493
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --------EP V AAPLEDDFFD Site 2493
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - --------FA  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg AVAAGGANAA V AGGAGGGGGA Site 2713
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - -DWTCVYASE  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. GRRMFSTSAL Q GAQGGARALL Site 2730
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d NKCLSESRIP S LAAIDLHVSS Site 2738
Dictyostelium.discoideum.CDK10..Probable.cyclin.de KKQNNNFNNF V QNNQTNQNNQ Site 2493
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d DAFSCPTQQS G FSFFVRHVMR Site 2900
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa PQAPYYTDLN N PNFNLSRIQS Site 2496
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - --CEPELMPT  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac AAVINGSQHP S SSSSVNDVSS Site 2493
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. AQQPFDDALE H EKLSVDEWKQ Site 2493
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ELVHRFITDQ Q QGKRPPLCIN Site 2492
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha GAAVNSSESL P PSSSANDISS Site 2492
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 GEKFKSDKSK E PRSINEFKRD Site 2706
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --DEPEAEPF D QSFESRELDI Site 2493
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar FQPLPSQPAK P AFSEVRIHPM Site 2836
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ------SNTG S DSNLSLIDSL Site 2492
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D NDQEELPVHH H KACRHRHHKP Site 2865
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U LLPSPSLHPS Q YQAQFAHQTY Site 2786
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d KTLRQSRKHL T GLQYLPQLTS Site 2493
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen PHLRSPAGPA S PLTTSYNPSS Site 2493
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro VTHEDNGDAK M GSLPQSMAGG Site 2493
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --TPGNLLPR P NCSIEALKEQ Site 2489
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d LPIPQRLGGP A PKAHPGPPHI Site 2493
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi YVLGQLVGLN S PNSILKAAKT Site 2493
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ATILIPPHAR I QAAASPPANA Site 2493
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable SSMKALLQEI K ERFTSSLVSD Site 2743
Aspergillus.fumigatus.IME2 CDGVSFGQQD S TPCRRDEKID Site 2759
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan MTSDYQRSNP H AAYQNPGPST Site 2523
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha EAQQSYDDSL E REKLSIEEWK Site 2497
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S KMYQFVMDRP A LYGVALCINP Site 2492
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma VLPSPTIHPS Q YPAQFAHQTY Site 2900
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -----DEPVA E EPFTFAMELD Site 2493
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ----HALPES V SIFSLKEIQL Site 2493
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - -----CEPEL  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de KKRTRQPRKH L PPGYLPQLAS Site 2493
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S AEEVDAPAPE P YDHSVDEREH Site 2491
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. TEAEPYDQTF E GVELETSEWK Site 2260
Candida.glabrata.IME2 QFGSDNLNYN I FENNSELRSP Site 2752
Homo.sapiens.MAK..Serine.threonine.protein.kinase. NTKTGRGQFS G RTYNPTAKNL Site 2760
Schizosaccharomyces.pombe.IME2 DSSAISSTFL D RDFPDFGITS Site 2788
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --------DE P VSEKIPEDFF Site 2492
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom PGEWLSEPEW T LEGIRGSRAQ Site 2756
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - -QKAAQQAAS  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ----VHQLHD T ASIFSLKEIQ Site 2494
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d RKARSEGRSR R RQQNQLLPLI Site 2492
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ELFNFSPFEL S IRPDLNQKLI Site 2492
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD AHNSGFSSMP V TLSMPEIKSN Site 2522
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----ARLPSG  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. LKAMRPHPGR P FFHTQPRSTP Site 2778
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act SASLSASLLA D WLEGHGMNPA Site 2777
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --DEPVADPY D QSFESRDLLI Site 2493
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ESIGTPQFHS P VGSPLKSIQA Site 2811
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. PKAQKYDDSF D DVDRTLEEWK Site 2497
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U LLTSANVASA Q YPHQFAAQSY Site 2900
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ----QLYQLP D EESLFAVSGV Site 2493
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD SIDDGQKFPI A EYRNRLYNDI Site 2493
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ATILIPPHAR I QAAASTPTNA Site 2493
Drosophila.melanogaster.GSK3H..Putative.glycogen.s DNLEEDVGDE N DYDYDDGGQC Site 2716
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -------SLN S EMPDFPNYKS Site 2492
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 MSMDSGGSQI P RGFMVPLISD Site 2742
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -------DEP I AEAPFKFDME Site 2493
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ----QLYQLP D EESLFTVSGV Site 2493
Cryptococcus.neoformans.IME2 LRRDKRTTSA S SASLQYQQSA Site 2799
Homo.sapiens.HIPK4..Homeodomain.interacting.protei GEWLSEPDCT L ESVRGPRAQG Site 2757
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 IIDSDMDSDR S KSSAVGKENV Site 2679
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom LLTSASVAPA Q YQHQFATQSY Site 2900
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A MNQQDYQVQQ A QQAAAAAAAA Site 2698
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep SELPIPQRGG K HSRQRMQPPH Site 2493
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. GRRHEKAPRR R TQGLQYLPQL Site 2492
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. GSGTNGRVPV L RPLKCIPASK Site 2528
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a SASLSASLLA D WLEGHGMNPA Site 2777
Mus.musculus.ICK..Serine.threonine.protein.kinase. LKAVRPHPGR P FFHTQPRSTP Site 2778
Saccharomyces.castelli.IME2 VEAGNTSLPF P DVAPRTFEIP Site 2757
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --TPGCQLPR P NCPVEALKEP Site 2492
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --RLWELTDM S SIFTVPNVRL Site 2493
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---ARTPDGK P LPPLFDFTED Site 2494
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ---NTYLLDG  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---TPGPQLP R PNSSTEALKE Site 2492
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho GMLSTHLTSM F EYLAPPRRKG Site 2492
Homo.sapiens.HIPK2..Homeodomain.interacting.protei VLPSPTIHPS Q YPAQFAHQTY Site 2900
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 GTRESEKEPR S VGVNGTSGDK Site 2699
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin KRVRLSGAGN Q QDFHHQQQQQ Site 2514
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G TPSSTSSTAT S QDHAHSSTSG Site 2494
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ----HKLPDT T SIFALKEIQL Site 2493
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ----HALPES V SIFSLKEIQL Site 2493
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA EAQQAYDDSL E HEKLSIEEWK Site 2497
Candida.albicans.SSN3..Serine.threonine.protein.ki QQNVQIQQVH Q MQQQIHSQQL Site 2527
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GGSYKSKPAA R GSVRERMEPP Site 2709
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ASKPSLRTAL I PPHVSQNSSS Site 2493
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara EPTAYDDSYD N ATLPLEEWKR Site 2261
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de EYSIARQSAN Q KTNEQHPSST Site 2736
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U NPRLLPSPTI H QTQFKPIFPS Site 2900
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d RGTSPRPPEG G LGYSQLGDDD Site 2495
Candida.dubliniensis.IME2 LGTRESEMEP R RAGNGTSDLK Site 2698
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DAAVSSKATP S QSSSINDISS Site 2493
Aspergillus.niger.IME2 TPCRRLPLAE E KTDANTSRQW Site 2770
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --DEPIAEPY D QSFESRELDI Site 2493
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d MLKRESKKTE S SKIPTLLNVD Site 2759
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --RLWELTDM S SIFTVPNVRL Site 2493
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 ENSSSKPSIK S EDLLNPDTFF Site 2754
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---EIEVYAP P PLPYDHNMDV Site 2243
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P GQLRDLPELF N FTRHVPPHQR Site 2494
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - -ARLPSGRPL  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. PQVQKYDDSF D DVDRTLDEWK Site 2497
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 LDDMSVDSSS S NRIPRSFAVP Site 2731
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 DASLGDSFNS M PDFTPRNFLI Site 2715
Schizosaccharomyces.japonicus.b.IME2 SVSNSATKSI Y YTPGFPSNQE Site 2789
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ESIGIPQFHS P VGSPLKSIQA Site 2811
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST TDTYVKAQNL R IFDFDVETEL Site 2493
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -DDETEAEPY D DSFDNVNLPL Site 2493
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de LKRESKKTDS S KIPTLLSMDP Site 2766
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act TDKQLDEREH S VEEWKELIYK Site 2493
Candida.albicans.IME2 LGTRESEMEP R RAGNEAHDLK Site 2698
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --DEPVADPY D QSFESRDLLI Site 2493
Kluyveromyces.lactis.IME2 QIPRNLLERA V QQRVLDCLLD Site 2765
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina SASLSASLLA D WLEGHGMNPA Site 2777
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. GAAVNSSESL P PSSAVNDISS Site 2492
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. PEAEPYDESV E AKERTLEEWK Site 2497
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - -MLKQKTHQG  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. PEAEPYDESV E AKERTLEEWK Site 2497
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME NKLSSGIITG N KKSHGAGGSS Site 2530
Neurospora.crassa.IME2 GKEALTPQSL E PKKRSSEYKW Site 2783
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ---CEPELMP  
Ashbya.gossypii.IME2 ASTDSHSQIP R DFIMEPTTIP Site 2772
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi YVLGQLVGLN S PNSILKTAKT Site 2493
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ----DDGKIN Q ITTDLKLLEF Site 2493
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace NSKGLVLALA H THRCHIHRCH Site 2741
Schizosaccharomyces.pombe.b.IME2 SCLLLQKSGM E MTSVLEYSTP Site 2726
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -------DEP I AEAPFKFDME Site 2492
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom NPRLLPSPTI H QTQYKPIFPP Site 2900
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - -VSSSDLTGR  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac PDKQLDEREH T IEEWKELIYK Site 2502
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable SSLELISYAD E ILQVLEANAQ Site 2758
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 TPDLDKGNVW V RSEELECPVY Site 2769
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil GITAGAAANA L GGLGVNRRIL Site 2493
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly TRHELSIAPQ L NHKLVPSHMR Site 2494
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ELFNFSPFEL S IRPDLNQKLI Site 2492
Species Residue at Site 4887
in 'msaprobs'
muscle

The residue for every species at site 4887 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo IHQFILEQQK G NRVPLCINPQ Site 2492
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 15:35, October 23rd 2019
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