cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4885 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4885 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4885 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4885 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 LDSEKPSIFS S DILEHDFPDF Site 2798
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --------SD E PVCMTPFSFD Site 2490
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 CQSPRTDHTN N LEIDEAMNPL Site 2491
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ---RATSLSR  
Chlamydomonas.reinhardtii.LF4 GGVGGGGGGA V GVGGVGVNKY Site 2787
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g PPLFNFNLAE L SIRPNLNKAI Site 2491
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ---MLKQKTH  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ---NAQPTAN  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho LIMTSDYQRS N PHAAYPNPGP Site 2521
Schizosaccharomyces.octosporus.b.IME2 PRPVRRNHGA P DFQASRSISC Site 2768
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- D EPISDKIPED Site 2243
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ---SKQNVVS  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - AEVHAPPPKR  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PSLLTSASVA P AQYQHQFATQ Site 2898
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ARRPAKLTRK H VPGFQYLPQL Site 2491
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ------DEPV A EVPFRINMEN Site 2488
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ---DNADAPM  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ---LNNKRLE  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ---TTTTSSS  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ------VHQL E DTASIFSLKE Site 2492
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. IGTQQFSLVQ N NFHWYTTVLI Site 2493
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET PSGAAVNSSE S LPPSSSINDI Site 2490
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 KTKKCSIPFV K PNRHSPSGIY Site 2729
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U PSGAAVNSSE S PPPSSSINDI Site 2490
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ETEAQQPFDD S LEHEKLTVDE Site 2495
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo EIIHQFILEQ Q KGNRVPLCIN Site 2490
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar GWHPRYLKKE N KTVSESRVPS Site 2743
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. PLGAAVTDGS Q AHTSSSSGDA Site 2490
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ELGPGTTGAS S SGAGLHWGGP Site 2797
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. LGTGANGKVP V LRPLKCAAVN Site 2527
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ---TKLPSGN  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ---TKLPNNK  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ---MLKQKTH  
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ---PRNSPGE  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO RQVIPSHPLP A HIQIPTQYSQ Site 2897
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl EIIHQFILEQ Q KGNRVPLCIN Site 2490
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 RKSRKHHCFT E TSKLQYLPQL Site 2491
Homo.sapiens.HIPK3..Homeodomain.interacting.protei GLNPRLLPSP T IHQTQYKPIF Site 2898
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O VKRGTSPRPP E GGLGYSQLGD Site 2493
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d SWHVSALNRA E GAPYPDQLAN Site 2889
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O VKRGTSPRPP E GGLGYSQLGD Site 2493
Naegleria.gruberi.LF4 YQTTTTYNNF Q SNKAPPIFQN Site 2716
Saccharomyces.bayanus.IME2 LGDASLGDSF N SMPDFTPRNF Site 2713
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --EETEAPPY D HSLDEADQSL Site 2252
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ----VLAQVQ Q QLLQKQQQQQ Site 2491
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d RQEPTPKGRP A LQLPGSSLLR Site 2868
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a RPGRRMFGIS V SQGAQGAARA Site 2725
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific FKRILNELVA L QSPNSIARAA Site 2491
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 EDAAPNRRLP L SDEKSATSAT Site 2765
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se REKMYQFVMD R PALYGVALCI Site 2490
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. TWSTKTGRGQ F SGRTYNPTAK Site 2758
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. PSGAAVNSSE S LPPSSSVNDI Site 2490
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ----SRLPNG R FLPPLFNFKS Site 2492
Penicillium.marneffei.IME2 DIDNTPVRQR D VTKIPEDTSS Site 2768
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ------DEPE  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a LDVFISRALK L CTKPEDLPDN Site 2761
Drosophila.melanogaster.MAK SLAPNAQKEK P AVASSFPWDE Site 2762
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de YGELGPGTTG A NSSGTTLQWG Site 2795
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - -------CEP  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin PSGAAVNSSE S LPPSSSVNDI Site 2490
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a PSDAAVSSNA T PSQSSSINDI Site 2488
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ---MLKQKTH  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ----WTTSPF L NQPIHYPERR Site 2491
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen SLNAILIPPH L RSPAGTTTLT Site 2491
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. PPQIYDAQLE E REHAIEEWKE Site 2490
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a LDVFISRALK L CTKPEDLPEN Site 2761
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ------HKLP D TTSIFALKEV Site 2491
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein SQNVFERQEY K YPPRRISCED Site 2491
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. LEGEKLSVEE W RKYTYEEVIN Site 2490
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - -----RTRLP  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SHSASPSTTS S SSSTPNSIPV Site 2526
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -----TPGPQ L PRPNSSTEAL Site 2491
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str SRGSCSSAGP S TILLVDGEHT Site 2491
Debaryomyces.hansenii.IME2 NNLDITNNDS V NNTEQYIPNN Site 2728
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - TRLPNGRSLP  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin VTNSSIGGLG V NRRILAAAAA Site 2490
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - --FTQNRPSV  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de SELPIPQRPG G PAPKAHPGPP Site 2491
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- E PVAAPLEDDF Site 2491
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg PSAVAAGGAN A AVAGGAGGGG Site 2711
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ---DWTCVYA  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. RPGRRMFSTS A LQGAQGGARA Site 2728
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d KENKCLSESR I PSLAAIDLHV Site 2736
Dictyostelium.discoideum.CDK10..Probable.cyclin.de QNKKQNNNFN N FVQNNQTNQN Site 2491
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d GTDAFSCPTQ Q SGFSFFVRHV Site 2898
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa EDPQAPYYTD L NNPNFNLSRI Site 2494
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----CEPELM  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac LGAAVINGSQ H PSSSSSVNDV Site 2491
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. TEAQQPFDDA L EHEKLSVDEW Site 2491
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri VKELVHRFIT D QQQGKRPPLC Site 2490
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha PSGAAVNSSE S LPPSSSANDI Site 2490
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 NYGEKFKSDK S KEPRSINEFK Site 2704
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ----DEPEAE P FDQSFESREL Site 2491
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar PRFQPLPSQP A KPAFSEVRIH Site 2834
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --------SN T GSDSNLSLID Site 2242
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D AQNDQEELPV H HHKACRHRHH Site 2863
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U QRLLPSPSLH P SQYQAQFAHQ Site 2784
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ARKTLRQSRK H LTGLQYLPQL Site 2491
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen IPPHLRSPAG P ASPLTTSYNP Site 2491
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro RRVTHEDNGD A KMGSLPQSMA Site 2491
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ----TPGNLL P RPNCSIEALK Site 2487
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d SELPIPQRLG G PAPKAHPGPP Site 2491
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi MKYVLGQLVG L NSPNSILKAA Site 2491
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen PLATILIPPH A RIQAAASPPA Site 2491
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable VSSSMKALLQ E IKERFTSSLV Site 2741
Aspergillus.fumigatus.IME2 AKCDGVSFGQ Q DSTPCRRDEK Site 2757
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan LIMTSDYQRS N PHAAYQNPGP Site 2521
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ETEAQQSYDD S LEREKLSIEE Site 2495
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S REKMYQFVMD R PALYGVALCI Site 2490
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PRVLPSPTIH P SQYPAQFAHQ Site 2898
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -------DEP V AEEPFTFAME Site 2491
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ------HALP E SVSIFSLKEI Site 2491
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - -------CEP  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de DRKKRTRQPR K HLPPGYLPQL Site 2491
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --AEEVDAPA P EPYDHSVDER Site 2489
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. EETEAEPYDQ T FEGVELETSE Site 2258
Candida.glabrata.IME2 VDQFGSDNLN Y NIFENNSELR Site 2750
Homo.sapiens.MAK..Serine.threonine.protein.kinase. TWNTKTGRGQ F SGRTYNPTAK Site 2758
Schizosaccharomyces.pombe.IME2 SNDSSAISST F LDRDFPDFGI Site 2786
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- D EPVSEKIPED Site 2243
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom SCPGEWLSEP E WTLEGIRGSR Site 2754
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ---QKAAQQA  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ------VHQL H DTASIFSLKE Site 2492
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d MKRKARSEGR S RRRQQNQLLP Site 2490
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH LPELFNFSPF E LSIRPDLNQK Site 2490
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD LDAHNSGFSS M PVTLSMPEIK Site 2520
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ------ARLP  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. SSLKAMRPHP G RPFFHTQPRS Site 2776
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ADSASLSASL L ADWLEGHGMN Site 2775
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ----DEPVAD P YDQSFESRDL Site 2491
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a QLESIGTPQF H SPVGSPLKSI Site 2809
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. DEPKAQKYDD S FDDVDRTLEE Site 2495
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PSLLTSANVA S AQYPHQFAAQ Site 2898
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ------QLYQ L PDEESLFAVS Site 2491
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD KISIDDGQKF P IAEYRNRLYN Site 2491
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen PLATILIPPH A RIQAAASTPT Site 2491
Drosophila.melanogaster.GSK3H..Putative.glycogen.s AEDNLEEDVG D ENDYDYDDGG Site 2714
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------S L NSEMPDFPNY Site 2243
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 DDMSMDSGGS Q IPRGFMVPLI Site 2740
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------D E PIAEAPFKFD Site 2491
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ------QLYQ L PDEESLFTVS Site 2491
Cryptococcus.neoformans.IME2 PLLRRDKRTT S ASSASLQYQQ Site 2797
Homo.sapiens.HIPK4..Homeodomain.interacting.protei CPGEWLSEPD C TLESVRGPRA Site 2755
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 TTIIDSDMDS D RSKSSAVGKE Site 2677
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PSLLTSASVA P AQYQHQFATQ Site 2898
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A NGMNQQDYQV Q QAQQAAAAAA Site 2696
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep HHSELPIPQR G GKHSRQRMQP Site 2491
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. RSGRRHEKAP R RRTQGLQYLP Site 2490
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. VLGSGTNGRV P VLRPLKCIPA Site 2526
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ADSASLSASL L ADWLEGHGMN Site 2775
Mus.musculus.ICK..Serine.threonine.protein.kinase. SSLKAVRPHP G RPFFHTQPRS Site 2776
Saccharomyces.castelli.IME2 EEVEAGNTSL P FPDVAPRTFE Site 2755
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ----TPGCQL P RPNCPVEALK Site 2490
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ----RLWELT D MSSIFTVPNV Site 2491
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -----ARTPD G KPLPPLFDFT Site 2492
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - -----NTYLL  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -----TPGPQ L PRPNSSTEAL Site 2490
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho LKGMLSTHLT S MFEYLAPPRR Site 2490
Homo.sapiens.HIPK2..Homeodomain.interacting.protei PRVLPSPTIH P SQYPAQFAHQ Site 2898
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 FIGTRESEKE P RSVGVNGTSG Site 2697
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin NAKRVRLSGA G NQQDFHHQQQ Site 2512
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SATPSSTSST A TSQDHAHSST Site 2492
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ------HKLP D TTSIFALKEI Site 2491
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ------HALP E SVSIFSLKEI Site 2491
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ETEAQQAYDD S LEHEKLSIEE Site 2495
Candida.albicans.SSN3..Serine.threonine.protein.ki SQQQNVQIQQ V HQMQQQIHSQ Site 2525
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF SYGGSYKSKP A ARGSVRERME Site 2707
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ELASKPSLRT A LIPPHVSQNS Site 2491
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara WPEPTAYDDS Y DNATLPLEEW Site 2259
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de VPEYSIARQS A NQKTNEQHPS Site 2734
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U GINPRLLPSP T IHQTQFKPIF Site 2898
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d VKRGTSPRPP E GGLGYSQLGD Site 2493
Candida.dubliniensis.IME2 EVLGTRESEM E PRRAGNGTSD Site 2696
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a PSDAAVSSKA T PSQSSSINDI Site 2491
Aspergillus.niger.IME2 DATPCRRLPL A EEKTDANTSR Site 2768
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ----DEPIAE P YDQSFESREL Site 2491
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d IKMLKRESKK T ESSKIPTLLN Site 2757
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ----RLWELT D MSSIFTVPNV Site 2491
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 SSENSSSKPS I KSEDLLNPDT Site 2752
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -----EIEVY A PPPLPYDHNM Site 2241
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P GTGQLRDLPE L FNFTRHVPPH Site 2492
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ---ARLPSGR  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. DEPQVQKYDD S FDDVDRTLDE Site 2495
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 NILDDMSVDS S SSNRIPRSFA Site 2729
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 LGDASLGDSF N SMPDFTPRNF Site 2713
Schizosaccharomyces.japonicus.b.IME2 ANSVSNSATK S IYYTPGFPSN Site 2787
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a QLESIGIPQF H SPVGSPLKSI Site 2809
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -DTDTYVKAQ N LRIFDFDVET Site 2491
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---DDETEAE P YDDSFDNVNL Site 2491
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de KVLKRESKKT D SSKIPTLLSM Site 2764
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act AITDKQLDER E HSVEEWKELI Site 2491
Candida.albicans.IME2 EVLGTRESEM E PRRAGNEAHD Site 2696
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ----DEPVAD P YDQSFESRDL Site 2491
Kluyveromyces.lactis.IME2 QEQIPRNLLE R AVQQRVLDCL Site 2763
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ADSASLSASL L ADWLEGHGMN Site 2775
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. PSGAAVNSSE S LPPSSAVNDI Site 2490
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. DEPEAEPYDE S VEAKERTLEE Site 2495
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ---MLKQKTH  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. DEPEAEPYDE S VEAKERTLEE Site 2495
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME PGNKLSSGII T GNKKSHGAGG Site 2527
Neurospora.crassa.IME2 DHGKEALTPQ S LEPKKRSSEY Site 2781
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - -----CEPEL  
Ashbya.gossypii.IME2 DDASTDSHSQ I PRDFIMEPTT Site 2770
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi MKYVLGQLVG L NSPNSILKTA Site 2491
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ------DDGK I NQITTDLKLL Site 2491
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace RLNSKGLVLA L AHTHRCHIHR Site 2739
Schizosaccharomyces.pombe.b.IME2 VASCLLLQKS G MEMTSVLEYS Site 2724
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------D E PIAEAPFKFD Site 2490
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom GINPRLLPSP T IHQTQYKPIF Site 2898
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ---VSSSDLT  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac KIPDKQLDER E HTIEEWKELI Site 2500
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable FTSSLELISY A DEILQVLEAN Site 2756
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 FLTPDLDKGN V WVRSEELECP Site 2767
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ASGITAGAAA N ALGGLGVNRR Site 2491
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly DFTRHELSIA P QLNHKLVPSH Site 2492
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk LPELFNFSPF E LSIRPDLNQK Site 2490
Species Residue at Site 4885
in 'msaprobs'
muscle

The residue for every species at site 4885 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo EIIHQFILEQ Q KGNRVPLCIN Site 2490
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 12:13, August 8th 2020
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