cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4884 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4884 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4884 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4884 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 HLDSEKPSIF S SDILEHDFPD Site 2797
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------S D EPVCMTPFSF Site 2243
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 ACQSPRTDHT N NLEIDEAMNP Site 2490
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----RATSLS  
Chlamydomonas.reinhardtii.LF4 GGGVGGGGGG A VGVGGVGVNK Site 2786
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g LPPLFNFNLA E LSIRPNLNKA Site 2490
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----MLKQKT  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----NAQPTA  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho GLIMTSDYQR S NPHAAYPNPG Site 2520
Schizosaccharomyces.octosporus.b.IME2 IPRPVRRNHG A PDFQASRSIS Site 2767
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - DEPISDKIPE  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----SKQNVV  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - -AEVHAPPPK  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei GPSLLTSASV A PAQYQHQFAT Site 2897
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar AARRPAKLTR K HVPGFQYLPQ Site 2490
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -------DEP V AEVPFRINME Site 2487
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----DNADAP  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----LNNKRL  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----TTTTSS  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -------VHQ L EDTASIFSLK Site 2491
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LIGTQQFSLV Q NNFHWYTTVL Site 2492
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SPSGAAVNSS E SLPPSSSIND Site 2489
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 EKTKKCSIPF V KPNRHSPSGI Site 2728
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SPSGAAVNSS E SPPPSSSIND Site 2489
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. EETEAQQPFD D SLEHEKLTVD Site 2494
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo KEIIHQFILE Q QKGNRVPLCI Site 2489
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar EGWHPRYLKK E NKTVSESRVP Site 2742
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. APLGAAVTDG S QAHTSSSSGD Site 2489
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d GELGPGTTGA S SSGAGLHWGG Site 2796
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. VLGTGANGKV P VLRPLKCAAV Site 2526
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----TKLPSG  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----TKLPNN  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----MLKQKT  
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----PRNSPG  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO SRQVIPSHPL P AHIQIPTQYS Site 2896
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl KEIIHQFILE Q QKGNRVPLCI Site 2489
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 LRKSRKHHCF T ETSKLQYLPQ Site 2490
Homo.sapiens.HIPK3..Homeodomain.interacting.protei VGLNPRLLPS P TIHQTQYKPI Site 2897
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O RVKRGTSPRP P EGGLGYSQLG Site 2492
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d SSWHVSALNR A EGAPYPDQLA Site 2888
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O RVKRGTSPRP P EGGLGYSQLG Site 2492
Naegleria.gruberi.LF4 TYQTTTTYNN F QSNKAPPIFQ Site 2715
Saccharomyces.bayanus.IME2 FLGDASLGDS F NSMPDFTPRN Site 2712
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---EETEAPP Y DHSLDEADQS Site 2251
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -----VLAQV Q QQLLQKQQQQ Site 2490
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d IRQEPTPKGR P ALQLPGSSLL Site 2867
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a PRPGRRMFGI S VSQGAQGAAR Site 2724
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific DFKRILNELV A LQSPNSIARA Site 2490
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 NEDAAPNRRL P LSDEKSATSA Site 2764
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se LREKMYQFVM D RPALYGVALC Site 2489
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. YTWSTKTGRG Q FSGRTYNPTA Site 2757
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SPSGAAVNSS E SLPPSSSVND Site 2489
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -----SRLPN G RFLPPLFNFK Site 2491
Penicillium.marneffei.IME2 GDIDNTPVRQ R DVTKIPEDTS Site 2767
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - -------DEP  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a DLDVFISRAL K LCTKPEDLPD Site 2760
Drosophila.melanogaster.MAK DSLAPNAQKE K PAVASSFPWD Site 2761
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de NYGELGPGTT G ANSSGTTLQW Site 2794
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - --------CE  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SPSGAAVNSS E SLPPSSSVND Site 2489
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a QPSDAAVSSN A TPSQSSSIND Site 2487
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----MLKQKT  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -----WTTSP F LNQPIHYPER Site 2490
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen PSLNAILIPP H LRSPAGTTTL Site 2490
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. PPPQIYDAQL E EREHAIEEWK Site 2489
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a DLDVFISRAL K LCTKPEDLPE Site 2760
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -------HKL P DTTSIFALKE Site 2490
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -SQNVFERQE Y KYPPRRISCE Site 2490
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. SLEGEKLSVE E WRKYTYEEVI Site 2489
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ------RTRL  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD NSHSASPSTT S SSSSTPNSIP Site 2525
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ------TPGP Q LPRPNSSTEA Site 2490
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ASRGSCSSAG P STILLVDGEH Site 2490
Debaryomyces.hansenii.IME2 FNNLDITNND S VNNTEQYIPN Site 2727
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - -TRLPNGRSL  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -VTNSSIGGL G VNRRILAAAA Site 2489
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ---FTQNRPS  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de PSELPIPQRP G GPAPKAHPGP Site 2490
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - EPVAAPLEDD  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg APSAVAAGGA N AAVAGGAGGG Site 2710
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----DWTCVY  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ARPGRRMFST S ALQGAQGGAR Site 2727
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d KKENKCLSES R IPSLAAIDLH Site 2735
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NQNKKQNNNF N NFVQNNQTNQ Site 2490
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d RGTDAFSCPT Q QSGFSFFVRH Site 2897
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa PEDPQAPYYT D LNNPNFNLSR Site 2493
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - -----CEPEL  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac PLGAAVINGS Q HPSSSSSVND Site 2490
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ETEAQQPFDD A LEHEKLSVDE Site 2490
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri QVKELVHRFI T DQQQGKRPPL Site 2489
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SPSGAAVNSS E SLPPSSSAND Site 2489
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 NNYGEKFKSD K SKEPRSINEF Site 2703
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -----DEPEA E PFDQSFESRE Site 2490
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar EPRFQPLPSQ P AKPAFSEVRI Site 2833
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------S N TGSDSNLSLI Site 2241
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D LAQNDQEELP V HHHKACRHRH Site 2862
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U AQRLLPSPSL H PSQYQAQFAH Site 2783
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d PARKTLRQSR K HLTGLQYLPQ Site 2490
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen LIPPHLRSPA G PASPLTTSYN Site 2490
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -RRVTHEDNG D AKMGSLPQSM Site 2490
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -----TPGNL L PRPNCSIEAL Site 2486
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d PSELPIPQRL G GPAPKAHPGP Site 2490
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi EMKYVLGQLV G LNSPNSILKA Site 2490
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen PPLATILIPP H ARIQAAASPP Site 2490
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable LVSSSMKALL Q EIKERFTSSL Site 2740
Aspergillus.fumigatus.IME2 SAKCDGVSFG Q QDSTPCRRDE Site 2756
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan GLIMTSDYQR S NPHAAYQNPG Site 2520
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha EETEAQQSYD D SLEREKLSIE Site 2494
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S LREKMYQFVM D RPALYGVALC Site 2489
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma GPRVLPSPTI H PSQYPAQFAH Site 2897
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --------DE P VAEEPFTFAM Site 2490
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -------HAL P ESVSIFSLKE Site 2490
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - --------CE  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de LDRKKRTRQP R KHLPPGYLPQ Site 2490
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---AEEVDAP A PEPYDHSVDE Site 2243
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -EETEAEPYD Q TFEGVELETS Site 2257
Candida.glabrata.IME2 LVDQFGSDNL N YNIFENNSEL Site 2749
Homo.sapiens.MAK..Serine.threonine.protein.kinase. YTWNTKTGRG Q FSGRTYNPTA Site 2757
Schizosaccharomyces.pombe.IME2 LSNDSSAISS T FLDRDFPDFG Site 2785
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - DEPVSEKIPE  
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom SSCPGEWLSE P EWTLEGIRGS Site 2753
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----QKAAQQ  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -------VHQ L HDTASIFSLK Site 2491
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d QMKRKARSEG R SRRRQQNQLL Site 2489
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH HLPELFNFSP F ELSIRPDLNQ Site 2489
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD QLDAHNSGFS S MPVTLSMPEI Site 2519
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - -------ARL  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. YSSLKAMRPH P GRPFFHTQPR Site 2775
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act QADSASLSAS L LADWLEGHGM Site 2774
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -----DEPVA D PYDQSFESRD Site 2490
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a KQLESIGTPQ F HSPVGSPLKS Site 2808
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -DEPKAQKYD D SFDDVDRTLE Site 2494
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U GPSLLTSANV A SAQYPHQFAA Site 2897
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -------QLY Q LPDEESLFAV Site 2490
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD IKISIDDGQK F PIAEYRNRLY Site 2490
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen PPLATILIPP H ARIQAAASTP Site 2490
Drosophila.melanogaster.GSK3H..Putative.glycogen.s DAEDNLEEDV G DENDYDYDDG Site 2713
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- S LNSEMPDFPN Site 2242
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 LDDMSMDSGG S QIPRGFMVPL Site 2739
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- D EPIAEAPFKF Site 2243
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -------QLY Q LPDEESLFTV Site 2490
Cryptococcus.neoformans.IME2 DPLLRRDKRT T SASSASLQYQ Site 2796
Homo.sapiens.HIPK4..Homeodomain.interacting.protei SCPGEWLSEP D CTLESVRGPR Site 2754
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 YTTIIDSDMD S DRSKSSAVGK Site 2676
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom GPSLLTSASV A PAQYQHQFAT Site 2897
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A GNGMNQQDYQ V QQAQQAAAAA Site 2695
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep AHHSELPIPQ R GGKHSRQRMQ Site 2490
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ERSGRRHEKA P RRRTQGLQYL Site 2489
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. SVLGSGTNGR V PVLRPLKCIP Site 2525
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a QADSASLSAS L LADWLEGHGM Site 2774
Mus.musculus.ICK..Serine.threonine.protein.kinase. YSSLKAVRPH P GRPFFHTQPR Site 2775
Saccharomyces.castelli.IME2 QEEVEAGNTS L PFPDVAPRTF Site 2754
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -----TPGCQ L PRPNCPVEAL Site 2489
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -----RLWEL T DMSSIFTVPN Site 2490
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ------ARTP D GKPLPPLFDF Site 2491
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ------NTYL  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ------TPGP Q LPRPNSSTEA Site 2489
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho DLKGMLSTHL T SMFEYLAPPR Site 2489
Homo.sapiens.HIPK2..Homeodomain.interacting.protei GPRVLPSPTI H PSQYPAQFAH Site 2897
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 DFIGTRESEK E PRSVGVNGTS Site 2696
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin PNAKRVRLSG A GNQQDFHHQQ Site 2511
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ASATPSSTSS T ATSQDHAHSS Site 2491
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -------HKL P DTTSIFALKE Site 2490
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -------HAL P ESVSIFSLKE Site 2490
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA EETEAQQAYD D SLEHEKLSIE Site 2494
Candida.albicans.SSN3..Serine.threonine.protein.ki LSQQQNVQIQ Q VHQMQQQIHS Site 2524
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF SSYGGSYKSK P AARGSVRERM Site 2706
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA GELASKPSLR T ALIPPHVSQN Site 2490
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara DWPEPTAYDD S YDNATLPLEE Site 2258
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de YVPEYSIARQ S ANQKTNEQHP Site 2733
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U VGINPRLLPS P TIHQTQFKPI Site 2897
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d RVKRGTSPRP P EGGLGYSQLG Site 2492
Candida.dubliniensis.IME2 NEVLGTRESE M EPRRAGNGTS Site 2695
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a QPSDAAVSSK A TPSQSSSIND Site 2490
Aspergillus.niger.IME2 SDATPCRRLP L AEEKTDANTS Site 2767
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -----DEPIA E PYDQSFESRE Site 2490
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d QIKMLKRESK K TESSKIPTLL Site 2756
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -----RLWEL T DMSSIFTVPN Site 2490
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 NSSENSSSKP S IKSEDLLNPD Site 2751
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ------EIEV Y APPPLPYDHN Site 2240
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P HGTGQLRDLP E LFNFTRHVPP Site 2491
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----ARLPSG  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -DEPQVQKYD D SFDDVDRTLD Site 2494
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 CNILDDMSVD S SSSNRIPRSF Site 2728
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 VLGDASLGDS F NSMPDFTPRN Site 2712
Schizosaccharomyces.japonicus.b.IME2 FANSVSNSAT K SIYYTPGFPS Site 2786
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a KQLESIGIPQ F HSPVGSPLKS Site 2808
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --DTDTYVKA Q NLRIFDFDVE Site 2490
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ----DDETEA E PYDDSFDNVN Site 2490
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de IKVLKRESKK T DSSKIPTLLS Site 2763
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act PAITDKQLDE R EHSVEEWKEL Site 2490
Candida.albicans.IME2 NEVLGTRESE M EPRRAGNEAH Site 2695
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -----DEPVA D PYDQSFESRD Site 2490
Kluyveromyces.lactis.IME2 LQEQIPRNLL E RAVQQRVLDC Site 2762
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina QADSASLSAS L LADWLEGHGM Site 2774
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SPSGAAVNSS E SLPPSSAVND Site 2489
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -DEPEAEPYD E SVEAKERTLE Site 2494
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----MLKQKT  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -DEPEAEPYD E SVEAKERTLE Site 2494
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME GPGNKLSSGI I TGNKKSHGAG Site 2526
Neurospora.crassa.IME2 ADHGKEALTP Q SLEPKKRSSE Site 2780
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ------CEPE  
Ashbya.gossypii.IME2 IDDASTDSHS Q IPRDFIMEPT Site 2769
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi EMKYVLGQLV G LNSPNSILKT Site 2490
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -------DDG K INQITTDLKL Site 2490
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace RRLNSKGLVL A LAHTHRCHIH Site 2738
Schizosaccharomyces.pombe.b.IME2 GVASCLLLQK S GMEMTSVLEY Site 2723
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- D EPIAEAPFKF Site 2243
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom VGINPRLLPS P TIHQTQYKPI Site 2897
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----VSSSDL  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac PKIPDKQLDE R EHTIEEWKEL Site 2499
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable RFTSSLELIS Y ADEILQVLEA Site 2755
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 SFLTPDLDKG N VWVRSEELEC Site 2766
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -ASGITAGAA A NALGGLGVNR Site 2490
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly FDFTRHELSI A PQLNHKLVPS Site 2491
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk HLPELFNFSP F ELSIRPDLNQ Site 2489
Species Residue at Site 4884
in 'msaprobs'
muscle

The residue for every species at site 4884 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo KEIIHQFILE Q QKGNRVPLCI Site 2489
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 08:30, June 1st 2020
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