cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4883 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4883 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4883 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4883 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 QHLDSEKPSI F SSDILEHDFP Site 2796
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- S DEPVCMTPFS Site 2242
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 IACQSPRTDH T NNLEIDEAMN Site 2489
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - -----RATSL  
Chlamydomonas.reinhardtii.LF4 AGGGVGGGGG G AVGVGGVGVN Site 2785
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g HLPPLFNFNL A ELSIRPNLNK Site 2489
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - -----MLKQK  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - -----NAQPT  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho GGLIMTSDYQ R SNPHAAYPNP Site 2519
Schizosaccharomyces.octosporus.b.IME2 LIPRPVRRNH G APDFQASRSI Site 2766
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - -DEPISDKIP  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - -----SKQNV  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - --AEVHAPPP  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei VGPSLLTSAS V APAQYQHQFA Site 2896
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar KAARRPAKLT R KHVPGFQYLP Site 2489
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --------DE P VAEVPFRINM Site 2486
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - -----DNADA  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - -----LNNKR  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - -----TTTTS  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --------VH Q LEDTASIFSL Site 2490
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. VLIGTQQFSL V QNNFHWYTTV Site 2491
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET PSPSGAAVNS S ESLPPSSSIN Site 2488
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 DEKTKKCSIP F VKPNRHSPSG Site 2727
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U PSPSGAAVNS S ESPPPSSSIN Site 2488
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -EETEAQQPF D DSLEHEKLTV Site 2493
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo VKEIIHQFIL E QQKGNRVPLC Site 2488
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar VEGWHPRYLK K ENKTVSESRV Site 2741
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. PAPLGAAVTD G SQAHTSSSSG Site 2488
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d YGELGPGTTG A SSSGAGLHWG Site 2795
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. SVLGTGANGK V PVLRPLKCAA Site 2525
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - -----TKLPS  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - -----TKLPN  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - -----MLKQK  
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - -----PRNSP  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO SSRQVIPSHP L PAHIQIPTQY Site 2895
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl VKEIIHQFIL E QQKGNRVPLC Site 2488
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 TLRKSRKHHC F TETSKLQYLP Site 2489
Homo.sapiens.HIPK3..Homeodomain.interacting.protei PVGLNPRLLP S PTIHQTQYKP Site 2896
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O QRVKRGTSPR P PEGGLGYSQL Site 2491
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ESSWHVSALN R AEGAPYPDQL Site 2887
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O QRVKRGTSPR P PEGGLGYSQL Site 2491
Naegleria.gruberi.LF4 MTYQTTTTYN N FQSNKAPPIF Site 2714
Saccharomyces.bayanus.IME2 NFLGDASLGD S FNSMPDFTPR Site 2711
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ----EETEAP P YDHSLDEADQ Site 2250
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ------VLAQ V QQQLLQKQQQ Site 2489
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d NIRQEPTPKG R PALQLPGSSL Site 2866
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a EPRPGRRMFG I SVSQGAQGAA Site 2723
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SDFKRILNEL V ALQSPNSIAR Site 2489
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 GNEDAAPNRR L PLSDEKSATS Site 2763
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ELREKMYQFV M DRPALYGVAL Site 2488
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. DYTWSTKTGR G QFSGRTYNPT Site 2756
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. PSPSGAAVNS S ESLPPSSSVN Site 2488
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ------SRLP N GRFLPPLFNF Site 2490
Penicillium.marneffei.IME2 FGDIDNTPVR Q RDVTKIPEDT Site 2766
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - --------DE  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a FDLDVFISRA L KLCTKPEDLP Site 2759
Drosophila.melanogaster.MAK ADSLAPNAQK E KPAVASSFPW Site 2760
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de QNYGELGPGT T GANSSGTTLQ Site 2793
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ---------C  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin PSPSGAAVNS S ESLPPSSSVN Site 2488
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a DQPSDAAVSS N ATPSQSSSIN Site 2486
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - -----MLKQK  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ------WTTS P FLNQPIHYPE Site 2489
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen QPSLNAILIP P HLRSPAGTTT Site 2489
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. APPPQIYDAQ L EEREHAIEEW Site 2488
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a FDLDVFISRA L KLCTKPEDLP Site 2759
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --------HK L PDTTSIFALK Site 2489
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein --SQNVFERQ E YKYPPRRISC Site 2489
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. DSLEGEKLSV E EWRKYTYEEV Site 2488
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - -------RTR  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD LNSHSASPST T SSSSSTPNSI Site 2524
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -------TPG P QLPRPNSSTE Site 2489
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -ASRGSCSSA G PSTILLVDGE Site 2489
Debaryomyces.hansenii.IME2 GFNNLDITNN D SVNNTEQYIP Site 2726
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - --TRLPNGRS  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin --VTNSSIGG L GVNRRILAAA Site 2488
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----FTQNRP  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de HPSELPIPQR P GGPAPKAHPG Site 2489
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - -EPVAAPLED  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GAPSAVAAGG A NAAVAGGAGG Site 2709
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - -----DWTCV  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. EARPGRRMFS T SALQGAQGGA Site 2726
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d IKKENKCLSE S RIPSLAAIDL Site 2734
Dictyostelium.discoideum.CDK10..Probable.cyclin.de KNQNKKQNNN F NNFVQNNQTN Site 2489
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d VRGTDAFSCP T QQSGFSFFVR Site 2896
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa HPEDPQAPYY T DLNNPNFNLS Site 2492
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ------CEPE  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac SPLGAAVING S QHPSSSSSVN Site 2489
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. EETEAQQPFD D ALEHEKLSVD Site 2489
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri WQVKELVHRF I TDQQQGKRPP Site 2488
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha PSPSGAAVNS S ESLPPSSSAN Site 2488
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 YNNYGEKFKS D KSKEPRSINE Site 2702
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ------DEPE A EPFDQSFESR Site 2489
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar AEPRFQPLPS Q PAKPAFSEVR Site 2832
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- S NTGSDSNLSL Site 2240
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D KLAQNDQEEL P VHHHKACRHR Site 2861
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U MAQRLLPSPS L HPSQYQAQFA Site 2782
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d KPARKTLRQS R KHLTGLQYLP Site 2489
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ILIPPHLRSP A GPASPLTTSY Site 2489
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro --RRVTHEDN G DAKMGSLPQS Site 2489
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ------TPGN L LPRPNCSIEA Site 2485
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d HPSELPIPQR L GGPAPKAHPG Site 2489
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi EEMKYVLGQL V GLNSPNSILK Site 2489
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen NPPLATILIP P HARIQAAASP Site 2489
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ELVSSSMKAL L QEIKERFTSS Site 2739
Aspergillus.fumigatus.IME2 PSAKCDGVSF G QQDSTPCRRD Site 2755
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan SGLIMTSDYQ R SNPHAAYQNP Site 2519
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -EETEAQQSY D DSLEREKLSI Site 2493
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ELREKMYQFV M DRPALYGVAL Site 2488
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma MGPRVLPSPT I HPSQYPAQFA Site 2896
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------D E PVAEEPFTFA Site 2489
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --------HA L PESVSIFSLK Site 2489
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ---------C  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ELDRKKRTRQ P RKHLPPGYLP Site 2489
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ----AEEVDA P APEPYDHSVD Site 2242
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --EETEAEPY D QTFEGVELET Site 2252
Candida.glabrata.IME2 SLVDQFGSDN L NYNIFENNSE Site 2748
Homo.sapiens.MAK..Serine.threonine.protein.kinase. EYTWNTKTGR G QFSGRTYNPT Site 2756
Schizosaccharomyces.pombe.IME2 VLSNDSSAIS S TFLDRDFPDF Site 2784
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - -DEPVSEKIP  
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom PSSCPGEWLS E PEWTLEGIRG Site 2752
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - -----QKAAQ  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --------VH Q LHDTASIFSL Site 2490
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d DQMKRKARSE G RSRRRQQNQL Site 2488
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH RHLPELFNFS P FELSIRPDLN Site 2488
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD EQLDAHNSGF S SMPVTLSMPE Site 2518
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - --------AR  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. GYSSLKAMRP H PGRPFFHTQP Site 2774
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act GQADSASLSA S LLADWLEGHG Site 2773
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ------DEPV A DPYDQSFESR Site 2489
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a SKQLESIGTP Q FHSPVGSPLK Site 2807
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --DEPKAQKY D DSFDDVDRTL Site 2493
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U VGPSLLTSAN V ASAQYPHQFA Site 2896
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --------QL Y QLPDEESLFA Site 2243
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD IIKISIDDGQ K FPIAEYRNRL Site 2489
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen NPPLATILIP P HARIQAAAST Site 2489
Drosophila.melanogaster.GSK3H..Putative.glycogen.s EDAEDNLEED V GDENDYDYDD Site 2712
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - SLNSEMPDFP  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 ILDDMSMDSG G SQIPRGFMVP Site 2738
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - DEPIAEAPFK  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --------QL Y QLPDEESLFT Site 2243
Cryptococcus.neoformans.IME2 ADPLLRRDKR T TSASSASLQY Site 2795
Homo.sapiens.HIPK4..Homeodomain.interacting.protei SSCPGEWLSE P DCTLESVRGP Site 2753
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 KYTTIIDSDM D SDRSKSSAVG Site 2675
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom VGPSLLTSAS V APAQYQHQFA Site 2896
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A PGNGMNQQDY Q VQQAQQAAAA Site 2694
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep PAHHSELPIP Q RGGKHSRQRM Site 2489
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. PERSGRRHEK A PRRRTQGLQY Site 2488
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. QSVLGSGTNG R VPVLRPLKCI Site 2524
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a GQADSASLSA S LLADWLEGHG Site 2773
Mus.musculus.ICK..Serine.threonine.protein.kinase. GYSSLKAVRP H PGRPFFHTQP Site 2774
Saccharomyces.castelli.IME2 EQEEVEAGNT S LPFPDVAPRT Site 2753
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ------TPGC Q LPRPNCPVEA Site 2488
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ------RLWE L TDMSSIFTVP Site 2489
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -------ART P DGKPLPPLFD Site 2490
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - -------NTY  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -------TPG P QLPRPNSSTE Site 2488
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho SDLKGMLSTH L TSMFEYLAPP Site 2488
Homo.sapiens.HIPK2..Homeodomain.interacting.protei MGPRVLPSPT I HPSQYPAQFA Site 2896
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 KDFIGTRESE K EPRSVGVNGT Site 2695
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin EPNAKRVRLS G AGNQQDFHHQ Site 2510
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G KASATPSSTS S TATSQDHAHS Site 2490
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --------HK L PDTTSIFALK Site 2489
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --------HA L PESVSIFSLK Site 2489
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -EETEAQQAY D DSLEHEKLSI Site 2493
Candida.albicans.SSN3..Serine.threonine.protein.ki QLSQQQNVQI Q QVHQMQQQIH Site 2523
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GSSYGGSYKS K PAARGSVRER Site 2705
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA AGELASKPSL R TALIPPHVSQ Site 2489
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara DDWPEPTAYD D SYDNATLPLE Site 2257
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de SYVPEYSIAR Q SANQKTNEQH Site 2732
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U AVGINPRLLP S PTIHQTQFKP Site 2896
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d QRVKRGTSPR P PEGGLGYSQL Site 2491
Candida.dubliniensis.IME2 VNEVLGTRES E MEPRRAGNGT Site 2694
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DQPSDAAVSS K ATPSQSSSIN Site 2489
Aspergillus.niger.IME2 HSDATPCRRL P LAEEKTDANT Site 2766
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ------DEPI A EPYDQSFESR Site 2489
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d KQIKMLKRES K KTESSKIPTL Site 2755
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ------RLWE L TDMSSIFTVP Site 2489
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 SNSSENSSSK P SIKSEDLLNP Site 2750
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -------EIE V YAPPPLPYDH Site 2239
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P RHGTGQLRDL P ELFNFTRHVP Site 2490
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - -----ARLPS  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --DEPQVQKY D DSFDDVDRTL Site 2493
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 RCNILDDMSV D SSSSNRIPRS Site 2727
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 NVLGDASLGD S FNSMPDFTPR Site 2711
Schizosaccharomyces.japonicus.b.IME2 SFANSVSNSA T KSIYYTPGFP Site 2785
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a NKQLESIGIP Q FHSPVGSPLK Site 2807
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---DTDTYVK A QNLRIFDFDV Site 2489
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -----DDETE A EPYDDSFDNV Site 2489
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de QIKVLKRESK K TDSSKIPTLL Site 2762
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act PPAITDKQLD E REHSVEEWKE Site 2489
Candida.albicans.IME2 VNEVLGTRES E MEPRRAGNEA Site 2694
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ------DEPV A DPYDQSFESR Site 2243
Kluyveromyces.lactis.IME2 DLQEQIPRNL L ERAVQQRVLD Site 2761
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina GQADSASLSA S LLADWLEGHG Site 2773
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. PSPSGAAVNS S ESLPPSSAVN Site 2488
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --DEPEAEPY D ESVEAKERTL Site 2493
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - -----MLKQK  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --DEPEAEPY D ESVEAKERTL Site 2493
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME VGPGNKLSSG I ITGNKKSHGA Site 2525
Neurospora.crassa.IME2 FADHGKEALT P QSLEPKKRSS Site 2779
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - -------CEP  
Ashbya.gossypii.IME2 SIDDASTDSH S QIPRDFIMEP Site 2768
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi DEMKYVLGQL V GLNSPNSILK Site 2489
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p --------DD G KINQITTDLK Site 2243
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ARRLNSKGLV L ALAHTHRCHI Site 2737
Schizosaccharomyces.pombe.b.IME2 EGVASCLLLQ K SGMEMTSVLE Site 2722
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - DEPIAEAPFK  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom PVGINPRLLP S PTIHQTQYKP Site 2896
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - -----VSSSD  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac PPKIPDKQLD E REHTIEEWKE Site 2498
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable GRFTSSLELI S YADEILQVLE Site 2754
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 TSFLTPDLDK G NVWVRSEELE Site 2765
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil --ASGITAGA A ANALGGLGVN Site 2489
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly LFDFTRHELS I APQLNHKLVP Site 2490
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk RHLPELFNFS P FELSIRPDLN Site 2488
Species Residue at Site 4883
in 'msaprobs'
muscle

The residue for every species at site 4883 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo VKEIIHQFIL E QQKGNRVPLC Site 2488
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:18, October 16th 2019
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