cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 4882 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4882 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4882 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4882 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 HQHLDSEKPS I FSSDILEHDF Site 2795
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - SDEPVCMTPF  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 QIACQSPRTD H TNNLEIDEAM Site 2488
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ------RATS  
Chlamydomonas.reinhardtii.LF4 HAGGGVGGGG G GAVGVGGVGV Site 2784
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g RHLPPLFNFN L AELSIRPNLN Site 2488
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ------MLKQ  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ------NAQP  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho SGGLIMTSDY Q RSNPHAAYPN Site 2518
Schizosaccharomyces.octosporus.b.IME2 SLIPRPVRRN H GAPDFQASRS Site 2765
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - --DEPISDKI  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ------SKQN  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ---AEVHAPP  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei SVGPSLLTSA S VAPAQYQHQF Site 2895
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar EKAARRPAKL T RKHVPGFQYL Site 2488
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------D E PVAEVPFRIN Site 2485
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ------DNAD  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ------LNNK  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ------TTTT  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------V H QLEDTASIFS Site 2243
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. TVLIGTQQFS L VQNNFHWYTT Site 2490
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET QPSPSGAAVN S SESLPPSSSI Site 2487
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 VDEKTKKCSI P FVKPNRHSPS Site 2726
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U QPSPSGAAVN S SESPPPSSSI Site 2487
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --EETEAQQP F DDSLEHEKLT Site 2492
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo QVKEIIHQFI L EQQKGNRVPL Site 2487
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar GVEGWHPRYL K KENKTVSESR Site 2740
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. QPAPLGAAVT D GSQAHTSSSS Site 2487
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d NYGELGPGTT G ASSSGAGLHW Site 2794
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. RSVLGTGANG K VPVLRPLKCA Site 2524
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ------TKLP  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ------TKLP  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ------MLKQ  
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ------PRNS  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO SSSRQVIPSH P LPAHIQIPTQ Site 2894
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl QVKEIIHQFI L EQQKGNRVPL Site 2487
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 KTLRKSRKHH C FTETSKLQYL Site 2488
Homo.sapiens.HIPK3..Homeodomain.interacting.protei VPVGLNPRLL P SPTIHQTQYK Site 2895
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O QQRVKRGTSP R PPEGGLGYSQ Site 2490
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d IESSWHVSAL N RAEGAPYPDQ Site 2886
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O QQRVKRGTSP R PPEGGLGYSQ Site 2490
Naegleria.gruberi.LF4 SMTYQTTTTY N NFQSNKAPPI Site 2713
Saccharomyces.bayanus.IME2 SNFLGDASLG D SFNSMPDFTP Site 2710
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -----EETEA P PYDHSLDEAD Site 2249
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -------VLA Q VQQQLLQKQQ Site 2488
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d SNIRQEPTPK G RPALQLPGSS Site 2865
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a PEPRPGRRMF G ISVSQGAQGA Site 2722
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SSDFKRILNE L VALQSPNSIA Site 2488
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 FGNEDAAPNR R LPLSDEKSAT Site 2762
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se FELREKMYQF V MDRPALYGVA Site 2487
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. SDYTWSTKTG R GQFSGRTYNP Site 2755
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. QPSPSGAAVN S SESLPPSSSV Site 2487
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -------SRL P NGRFLPPLFN Site 2489
Penicillium.marneffei.IME2 SFGDIDNTPV R QRDVTKIPED Site 2765
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ---------D  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a QFDLDVFISR A LKLCTKPEDL Site 2758
Drosophila.melanogaster.MAK HADSLAPNAQ K EKPAVASSFP Site 2759
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de LQNYGELGPG T TGANSSGTTL Site 2792
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin QPSPSGAAVN S SESLPPSSSV Site 2487
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a KDQPSDAAVS S NATPSQSSSI Site 2485
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ------MLKQ  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -------WTT S PFLNQPIHYP Site 2488
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen IQPSLNAILI P PHLRSPAGTT Site 2488
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. EAPPPQIYDA Q LEEREHAIEE Site 2487
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a QFDLDVFISR A LKLCTKPEDL Site 2758
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------H K LPDTTSIFAL Site 2488
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---SQNVFER Q EYKYPPRRIS Site 2488
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -DSLEGEKLS V EEWRKYTYEE Site 2487
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - --------RT  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD NLNSHSASPS T TSSSSSTPNS Site 2523
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --------TP G PQLPRPNSST Site 2488
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --ASRGSCSS A GPSTILLVDG Site 2488
Debaryomyces.hansenii.IME2 EGFNNLDITN N DSVNNTEQYI Site 2725
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ---TRLPNGR  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---VTNSSIG G LGVNRRILAA Site 2487
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - -----FTQNR  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de AHPSELPIPQ R PGGPAPKAHP Site 2488
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - --EPVAAPLE  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg SGAPSAVAAG G ANAAVAGGAG Site 2708
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ------DWTC  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. PEARPGRRMF S TSALQGAQGG Site 2725
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d LIKKENKCLS E SRIPSLAAID Site 2733
Dictyostelium.discoideum.CDK10..Probable.cyclin.de FKNQNKKQNN N FNNFVQNNQT Site 2488
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d QVRGTDAFSC P TQQSGFSFFV Site 2895
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa YHPEDPQAPY Y TDLNNPNFNL Site 2491
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - -------CEP  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac PSPLGAAVIN G SQHPSSSSSV Site 2488
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -EETEAQQPF D DALEHEKLSV Site 2488
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri VWQVKELVHR F ITDQQQGKRP Site 2487
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha QPSPSGAAVN S SESLPPSSSA Site 2487
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 LYNNYGEKFK S DKSKEPRSIN Site 2701
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -------DEP E AEPFDQSFES Site 2488
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar PAEPRFQPLP S QPAKPAFSEV Site 2831
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - SNTGSDSNLS  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D RKLAQNDQEE L PVHHHKACRH Site 2860
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U SMAQRLLPSP S LHPSQYQAQF Site 2781
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d DKPARKTLRQ S RKHLTGLQYL Site 2488
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen AILIPPHLRS P AGPASPLTTS Site 2488
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---RRVTHED N GDAKMGSLPQ Site 2488
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -------TPG N LLPRPNCSIE Site 2484
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d AHPSELPIPQ R LGGPAPKAHP Site 2488
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi TEEMKYVLGQ L VGLNSPNSIL Site 2488
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen SNPPLATILI P PHARIQAAAS Site 2488
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable PELVSSSMKA L LQEIKERFTS Site 2738
Aspergillus.fumigatus.IME2 SPSAKCDGVS F GQQDSTPCRR Site 2754
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan SSGLIMTSDY Q RSNPHAAYQN Site 2518
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --EETEAQQS Y DDSLEREKLS Site 2492
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S FELREKMYQF V MDRPALYGVA Site 2487
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma SMGPRVLPSP T IHPSQYPAQF Site 2895
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- D EPVAEEPFTF Site 2243
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------H A LPESVSIFSL Site 2488
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de RELDRKKRTR Q PRKHLPPGYL Site 2488
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -----AEEVD A PAPEPYDHSV Site 2241
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---EETEAEP Y DQTFEGVELE Site 2251
Candida.glabrata.IME2 ISLVDQFGSD N LNYNIFENNS Site 2747
Homo.sapiens.MAK..Serine.threonine.protein.kinase. SEYTWNTKTG R GQFSGRTYNP Site 2755
Schizosaccharomyces.pombe.IME2 TVLSNDSSAI S STFLDRDFPD Site 2783
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - --DEPVSEKI  
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom DPSSCPGEWL S EPEWTLEGIR Site 2751
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ------QKAA  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------V H QLHDTASIFS Site 2243
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -DQMKRKARS E GRSRRRQQNQ Site 2487
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH PRHLPELFNF S PFELSIRPDL Site 2487
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD LEQLDAHNSG F SSMPVTLSMP Site 2517
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ---------A  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. PGYSSLKAMR P HPGRPFFHTQ Site 2773
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act DGQADSASLS A SLLADWLEGH Site 2772
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -------DEP V ADPYDQSFES Site 2488
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a LSKQLESIGT P QFHSPVGSPL Site 2806
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---DEPKAQK Y DDSFDDVDRT Site 2492
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U SVGPSLLTSA N VASAQYPHQF Site 2895
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------Q L YQLPDEESLF Site 2242
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD RIIKISIDDG Q KFPIAEYRNR Site 2488
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen SNPPLATILI P PHARIQAAAS Site 2488
Drosophila.melanogaster.GSK3H..Putative.glycogen.s GEDAEDNLEE D VGDENDYDYD Site 2711
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - -SLNSEMPDF  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 HILDDMSMDS G GSQIPRGFMV Site 2737
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - -DEPIAEAPF  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------Q L YQLPDEESLF Site 2242
Cryptococcus.neoformans.IME2 WADPLLRRDK R TTSASSASLQ Site 2794
Homo.sapiens.HIPK4..Homeodomain.interacting.protei PSSCPGEWLS E PDCTLESVRG Site 2752
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 QKYTTIIDSD M DSDRSKSSAV Site 2674
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom SVGPSLLTSA S VAPAQYQHQF Site 2895
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QPGNGMNQQD Y QVQQAQQAAA Site 2693
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -PAHHSELPI P QRGGKHSRQR Site 2488
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. EPERSGRRHE K APRRRTQGLQ Site 2487
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. LQSVLGSGTN G RVPVLRPLKC Site 2523
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a DGQADSASLS A SLLADWLEGH Site 2772
Mus.musculus.ICK..Serine.threonine.protein.kinase. PGYSSLKAVR P HPGRPFFHTQ Site 2773
Saccharomyces.castelli.IME2 QEQEEVEAGN T SLPFPDVAPR Site 2752
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -------TPG C QLPRPNCPVE Site 2487
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -------RLW E LTDMSSIFTV Site 2488
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --------AR T PDGKPLPPLF Site 2489
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - --------NT  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --------TP G PQLPRPNSST Site 2487
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho PSDLKGMLST H LTSMFEYLAP Site 2487
Homo.sapiens.HIPK2..Homeodomain.interacting.protei SMGPRVLPSP T IHPSQYPAQF Site 2895
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 VKDFIGTRES E KEPRSVGVNG Site 2694
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin AEPNAKRVRL S GAGNQQDFHH Site 2509
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SKASATPSST S STATSQDHAH Site 2489
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------H K LPDTTSIFAL Site 2488
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------H A LPESVSIFSL Site 2488
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --EETEAQQA Y DDSLEHEKLS Site 2492
Candida.albicans.SSN3..Serine.threonine.protein.ki HQLSQQQNVQ I QQVHQMQQQI Site 2522
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF AGSSYGGSYK S KPAARGSVRE Site 2704
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TAGELASKPS L RTALIPPHVS Site 2488
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -DDWPEPTAY D DSYDNATLPL Site 2252
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de DSYVPEYSIA R QSANQKTNEQ Site 2731
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U VAVGINPRLL P SPTIHQTQFK Site 2895
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d QQRVKRGTSP R PPEGGLGYSQ Site 2490
Candida.dubliniensis.IME2 KVNEVLGTRE S EMEPRRAGNG Site 2693
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a KDQPSDAAVS S KATPSQSSSI Site 2488
Aspergillus.niger.IME2 GHSDATPCRR L PLAEEKTDAN Site 2765
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -------DEP I AEPYDQSFES Site 2488
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d VKQIKMLKRE S KKTESSKIPT Site 2754
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -------RLW E LTDMSSIFTV Site 2488
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 ISNSSENSSS K PSIKSEDLLN Site 2749
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --------EI E VYAPPPLPYD Site 2238
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P SRHGTGQLRD L PELFNFTRHV Site 2489
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ------ARLP  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---DEPQVQK Y DDSFDDVDRT Site 2492
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 HRCNILDDMS V DSSSSNRIPR Site 2726
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 DNVLGDASLG D SFNSMPDFTP Site 2710
Schizosaccharomyces.japonicus.b.IME2 CSFANSVSNS A TKSIYYTPGF Site 2784
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a FNKQLESIGI P QFHSPVGSPL Site 2806
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ----DTDTYV K AQNLRIFDFD Site 2488
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ------DDET E AEPYDDSFDN Site 2488
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de KQIKVLKRES K KTDSSKIPTL Site 2761
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act PPPAITDKQL D EREHSVEEWK Site 2488
Candida.albicans.IME2 KVNEVLGTRE S EMEPRRAGNE Site 2693
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -------DEP V ADPYDQSFES Site 2242
Kluyveromyces.lactis.IME2 LDLQEQIPRN L LERAVQQRVL Site 2760
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina DGQADSASLS A SLLADWLEGH Site 2772
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. QPSPSGAAVN S SESLPPSSAV Site 2487
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---DEPEAEP Y DESVEAKERT Site 2492
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ------MLKQ  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---DEPEAEP Y DESVEAKERT Site 2492
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME IVGPGNKLSS G IITGNKKSHG Site 2524
Neurospora.crassa.IME2 FFADHGKEAL T PQSLEPKKRS Site 2778
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - --------CE  
Ashbya.gossypii.IME2 MSIDDASTDS H SQIPRDFIME Site 2767
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi TDEMKYVLGQ L VGLNSPNSIL Site 2488
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------D D GKINQITTDL Site 2242
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace TARRLNSKGL V LALAHTHRCH Site 2736
Schizosaccharomyces.pombe.b.IME2 KEGVASCLLL Q KSGMEMTSVL Site 2721
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - -DEPIAEAPF  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom VPVGINPRLL P SPTIHQTQYK Site 2895
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ------VSSS  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac PPPKIPDKQL D EREHTIEEWK Site 2497
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable RGRFTSSLEL I SYADEILQVL Site 2753
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 TTSFLTPDLD K GNVWVRSEEL Site 2764
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---ASGITAG A AANALGGLGV Site 2488
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly PLFDFTRHEL S IAPQLNHKLV Site 2489
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk PRHLPELFNF S PFELSIRPDL Site 2487
Species Residue at Site 4882
in 'msaprobs'
muscle

The residue for every species at site 4882 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo QVKEIIHQFI L EQQKGNRVPL Site 2487
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 09:16, May 30th 2020
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