cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4881 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4881 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4881 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4881 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 SHQHLDSEKP S IFSSDILEHD Site 2794
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - -SDEPVCMTP  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 SQIACQSPRT D HTNNLEIDEA Site 2487
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - -------RAT  
Chlamydomonas.reinhardtii.LF4 GHAGGGVGGG G GGAVGVGGVG Site 2783
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ERHLPPLFNF N LAELSIRPNL Site 2487
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - -------MLK  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - -------NAQ  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho TSGGLIMTSD Y QRSNPHAAYP Site 2517
Schizosaccharomyces.octosporus.b.IME2 HSLIPRPVRR N HGAPDFQASR Site 2764
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ---DEPISDK  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - -------SKQ  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----AEVHAP  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei VSVGPSLLTS A SVAPAQYQHQ Site 2894
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar HEKAARRPAK L TRKHVPGFQY Site 2487
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- D EPVAEVPFRI Site 2243
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - -------DNA  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - -------LNN  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - -------TTT  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- V HQLEDTASIF Site 2242
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. TTVLIGTQQF S LVQNNFHWYT Site 2489
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET GQPSPSGAAV N SSESLPPSSS Site 2486
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 RVDEKTKKCS I PFVKPNRHSP Site 2725
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U GQPSPSGAAV N SSESPPPSSS Site 2486
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---EETEAQQ P FDDSLEHEKL Site 2491
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo RQVKEIIHQF I LEQQKGNRVP Site 2486
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar KGVEGWHPRY L KKENKTVSES Site 2739
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. GQPAPLGAAV T DGSQAHTSSS Site 2486
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d QNYGELGPGT T GASSSGAGLH Site 2793
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. LRSVLGTGAN G KVPVLRPLKC Site 2523
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - -------TKL  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - -------TKL  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - -------MLK  
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - -------PRN  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO NSSSRQVIPS H PLPAHIQIPT Site 2893
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl RQVKEIIHQF I LEQQKGNRVP Site 2486
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 RKTLRKSRKH H CFTETSKLQY Site 2487
Homo.sapiens.HIPK3..Homeodomain.interacting.protei QVPVGLNPRL L PSPTIHQTQY Site 2894
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O EQQRVKRGTS P RPPEGGLGYS Site 2489
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d QIESSWHVSA L NRAEGAPYPD Site 2885
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O EQQRVKRGTS P RPPEGGLGYS Site 2489
Naegleria.gruberi.LF4 SSMTYQTTTT Y NNFQSNKAPP Site 2712
Saccharomyces.bayanus.IME2 GSNFLGDASL G DSFNSMPDFT Site 2709
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ------EETE A PPYDHSLDEA Site 2243
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --------VL A QVQQQLLQKQ Site 2487
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d SSNIRQEPTP K GRPALQLPGS Site 2864
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a APEPRPGRRM F GISVSQGAQG Site 2721
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SSSDFKRILN E LVALQSPNSI Site 2487
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 SFGNEDAAPN R RLPLSDEKSA Site 2761
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se MFELREKMYQ F VMDRPALYGV Site 2486
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ASDYTWSTKT G RGQFSGRTYN Site 2754
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. GQPSPSGAAV N SSESLPPSSS Site 2486
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --------SR L PNGRFLPPLF Site 2488
Penicillium.marneffei.IME2 VSFGDIDNTP V RQRDVTKIPE Site 2764
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a PQFDLDVFIS R ALKLCTKPED Site 2757
Drosophila.melanogaster.MAK SHADSLAPNA Q KEKPAVASSF Site 2758
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de KLQNYGELGP G TTGANSSGTT Site 2791
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin GQPSPSGAAV N SSESLPPSSS Site 2486
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a VKDQPSDAAV S SNATPSQSSS Site 2484
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - -------MLK  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p --------WT T SPFLNQPIHY Site 2243
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen SIQPSLNAIL I PPHLRSPAGT Site 2487
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. AEAPPPQIYD A QLEEREHAIE Site 2486
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a PQFDLDVFIS R ALKLCTKPED Site 2757
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- H KLPDTTSIFA Site 2243
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ----SQNVFE R QEYKYPPRRI Site 2487
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --DSLEGEKL S VEEWRKYTYE Site 2486
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ---------R  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SNLNSHSASP S TTSSSSSTPN Site 2522
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------T P GPQLPRPNSS Site 2243
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---ASRGSCS S AGPSTILLVD Site 2243
Debaryomyces.hansenii.IME2 WEGFNNLDIT N NDSVNNTEQY Site 2724
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----TRLPNG  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ----VTNSSI G GLGVNRRILA Site 2486
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ------FTQN  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -AHPSELPIP Q RPGGPAPKAH Site 2487
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ---EPVAAPL  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ASGAPSAVAA G GANAAVAGGA Site 2707
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - -------DWT  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. PPEARPGRRM F STSALQGAQG Site 2724
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d RLIKKENKCL S ESRIPSLAAI Site 2732
Dictyostelium.discoideum.CDK10..Probable.cyclin.de SFKNQNKKQN N NFNNFVQNNQ Site 2487
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d LQVRGTDAFS C PTQQSGFSFF Site 2894
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa AYHPEDPQAP Y YTDLNNPNFN Site 2490
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - --------CE  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac QPSPLGAAVI N GSQHPSSSSS Site 2487
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --EETEAQQP F DDALEHEKLS Site 2487
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri SVWQVKELVH R FITDQQQGKR Site 2486
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha GQPSPSGAAV N SSESLPPSSS Site 2486
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 TLYNNYGEKF K SDKSKEPRSI Site 2700
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --------DE P EAEPFDQSFE Site 2487
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar IPAEPRFQPL P SQPAKPAFSE Site 2830
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - -SNTGSDSNL  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D RRKLAQNDQE E LPVHHHKACR Site 2859
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U VSMAQRLLPS P SLHPSQYQAQ Site 2780
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d HDKPARKTLR Q SRKHLTGLQY Site 2487
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen NAILIPPHLR S PAGPASPLTT Site 2487
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ----RRVTHE D NGDAKMGSLP Site 2487
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --------TP G NLLPRPNCSI Site 2483
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -AHPSELPIP Q RLGGPAPKAH Site 2487
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi TTEEMKYVLG Q LVGLNSPNSI Site 2487
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen SSNPPLATIL I PPHARIQAAA Site 2487
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable LPELVSSSMK A LLQEIKERFT Site 2737
Aspergillus.fumigatus.IME2 PSPSAKCDGV S FGQQDSTPCR Site 2753
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan TSSGLIMTSD Y QRSNPHAAYQ Site 2517
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---EETEAQQ S YDDSLEREKL Site 2491
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S MFELREKMYQ F VMDRPALYGV Site 2486
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma VSMGPRVLPS P TIHPSQYPAQ Site 2894
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - DEPVAEEPFT  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- H ALPESVSIFS Site 2243
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de TRELDRKKRT R QPRKHLPPGY Site 2487
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ------AEEV D APAPEPYDHS Site 2240
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ----EETEAE P YDQTFEGVEL Site 2250
Candida.glabrata.IME2 PISLVDQFGS D NLNYNIFENN Site 2746
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ASEYTWNTKT G RGQFSGRTYN Site 2754
Schizosaccharomyces.pombe.IME2 STVLSNDSSA I SSTFLDRDFP Site 2782
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ---DEPVSEK  
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom FDPSSCPGEW L SEPEWTLEGI Site 2750
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - -------QKA  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- V HQLHDTASIF Site 2242
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --DQMKRKAR S EGRSRRRQQN Site 2486
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH SPRHLPELFN F SPFELSIRPD Site 2486
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD RLEQLDAHNS G FSSMPVTLSM Site 2516
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. SPGYSSLKAM R PHPGRPFFHT Site 2772
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act QDGQADSASL S ASLLADWLEG Site 2771
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --------DE P VADPYDQSFE Site 2487
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a LLSKQLESIG T PQFHSPVGSP Site 2805
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ----DEPKAQ K YDDSFDDVDR Site 2491
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U VSVGPSLLTS A NVASAQYPHQ Site 2894
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- Q LYQLPDEESL Site 2241
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD DRIIKISIDD G QKFPIAEYRN Site 2263
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen SSNPPLATIL I PPHARIQAAA Site 2487
Drosophila.melanogaster.GSK3H..Putative.glycogen.s VGEDAEDNLE E DVGDENDYDY Site 2710
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - --SLNSEMPD  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 CHILDDMSMD S GGSQIPRGFM Site 2736
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - --DEPIAEAP  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- Q LYQLPDEESL Site 2241
Cryptococcus.neoformans.IME2 EWADPLLRRD K RTTSASSASL Site 2793
Homo.sapiens.HIPK4..Homeodomain.interacting.protei DPSSCPGEWL S EPDCTLESVR Site 2751
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 FQKYTTIIDS D MDSDRSKSSA Site 2673
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom VSVGPSLLTS A SVAPAQYQHQ Site 2894
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A GQPGNGMNQQ D YQVQQAQQAA Site 2692
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --PAHHSELP I PQRGGKHSRQ Site 2487
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. KEPERSGRRH E KAPRRRTQGL Site 2486
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. TLQSVLGSGT N GRVPVLRPLK Site 2522
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a QDGQADSASL S ASLLADWLEG Site 2771
Mus.musculus.ICK..Serine.threonine.protein.kinase. PPGYSSLKAV R PHPGRPFFHT Site 2772
Saccharomyces.castelli.IME2 EQEQEEVEAG N TSLPFPDVAP Site 2751
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --------TP G CQLPRPNCPV Site 2486
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --------RL W ELTDMSSIFT Site 2243
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------A R TPDGKPLPPL Site 2488
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ---------N  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------T P GPQLPRPNSS Site 2243
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -PSDLKGMLS T HLTSMFEYLA Site 2486
Homo.sapiens.HIPK2..Homeodomain.interacting.protei VSMGPRVLPS P TIHPSQYPAQ Site 2894
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 KVKDFIGTRE S EKEPRSVGVN Site 2693
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin NAEPNAKRVR L SGAGNQQDFH Site 2508
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G VSKASATPSS T SSTATSQDHA Site 2488
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- H KLPDTTSIFA Site 2243
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- H ALPESVSIFS Site 2243
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---EETEAQQ A YDDSLEHEKL Site 2491
Candida.albicans.SSN3..Serine.threonine.protein.ki GHQLSQQQNV Q IQQVHQMQQQ Site 2521
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF VAGSSYGGSY K SKPAARGSVR Site 2703
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA FTAGELASKP S LRTALIPPHV Site 2487
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --DDWPEPTA Y DDSYDNATLP Site 2251
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de IDSYVPEYSI A RQSANQKTNE Site 2730
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U QVAVGINPRL L PSPTIHQTQF Site 2894
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d EQQRVKRGTS P RPPEGGLGYS Site 2489
Candida.dubliniensis.IME2 LKVNEVLGTR E SEMEPRRAGN Site 2692
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a VKDQPSDAAV S SKATPSQSSS Site 2487
Aspergillus.niger.IME2 FGHSDATPCR R LPLAEEKTDA Site 2764
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --------DE P IAEPYDQSFE Site 2487
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d EVKQIKMLKR E SKKTESSKIP Site 2753
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --------RL W ELTDMSSIFT Site 2243
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 SISNSSENSS S KPSIKSEDLL Site 2748
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------E I EVYAPPPLPY Site 2237
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P DSRHGTGQLR D LPELFNFTRH Site 2488
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - -------ARL  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ----DEPQVQ K YDDSFDDVDR Site 2491
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 HHRCNILDDM S VDSSSSNRIP Site 2725
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 GDNVLGDASL G DSFNSMPDFT Site 2709
Schizosaccharomyces.japonicus.b.IME2 NCSFANSVSN S ATKSIYYTPG Site 2783
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a LFNKQLESIG I PQFHSPVGSP Site 2805
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -----DTDTY V KAQNLRIFDF Site 2487
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -------DDE T EAEPYDDSFD Site 2487
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de VKQIKVLKRE S KKTDSSKIPT Site 2760
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act APPPAITDKQ L DEREHSVEEW Site 2487
Candida.albicans.IME2 LKVNEVLGTR E SEMEPRRAGN Site 2692
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --------DE P VADPYDQSFE Site 2241
Kluyveromyces.lactis.IME2 SLDLQEQIPR N LLERAVQQRV Site 2759
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina QDGQADSASL S ASLLADWLEG Site 2771
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SQPSPSGAAV N SSESLPPSSA Site 2486
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ----DEPEAE P YDESVEAKER Site 2491
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - -------MLK  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ----DEPEAE P YDESVEAKER Site 2491
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME IIVGPGNKLS S GIITGNKKSH Site 2523
Neurospora.crassa.IME2 IFFADHGKEA L TPQSLEPKKR Site 2777
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ---------C  
Ashbya.gossypii.IME2 EMSIDDASTD S HSQIPRDFIM Site 2766
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ATDEMKYVLG Q LVGLNSPNSI Site 2487
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- D DGKINQITTD Site 2241
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace FTARRLNSKG L VLALAHTHRC Site 2735
Schizosaccharomyces.pombe.b.IME2 NKEGVASCLL L QKSGMEMTSV Site 2720
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - --DEPIAEAP  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom QVPVGINPRL L PSPTIHQTQY Site 2894
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - -------VSS  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac APPPKIPDKQ L DEREHTIEEW Site 2496
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable IRGRFTSSLE L ISYADEILQV Site 2752
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ETTSFLTPDL D KGNVWVRSEE Site 2763
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ----ASGITA G AAANALGGLG Site 2487
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly PPLFDFTRHE L SIAPQLNHKL Site 2488
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk SPRHLPELFN F SPFELSIRPD Site 2486
Species Residue at Site 4881
in 'msaprobs'
muscle

The residue for every species at site 4881 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo RQVKEIIHQF I LEQQKGNRVP Site 2486
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 00:56, October 22nd 2020
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