cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4880 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4880 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4880 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4880 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 DSHQHLDSEK P SIFSSDILEH Site 2793
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - --SDEPVCMT  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 ESQIACQSPR T DHTNNLEIDE Site 2486
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - --------RA  
Chlamydomonas.reinhardtii.LF4 GGHAGGGVGG G GGGAVGVGGV Site 2782
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g IERHLPPLFN F NLAELSIRPN Site 2486
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - --------ML  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - --------NA  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho TTSGGLIMTS D YQRSNPHAAY Site 2516
Schizosaccharomyces.octosporus.b.IME2 NHSLIPRPVR R NHGAPDFQAS Site 2763
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----DEPISD  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - --------SK  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - -----AEVHA  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PVSVGPSLLT S ASVAPAQYQH Site 2893
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar EHEKAARRPA K LTRKHVPGFQ Site 2486
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - DEPVAEVPFR  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - --------DN  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - --------LN  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - --------TT  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - VHQLEDTASI  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. YTTVLIGTQQ F SLVQNNFHWY Site 2488
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET KGQPSPSGAA V NSSESLPPSS Site 2485
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 YRVDEKTKKC S IPFVKPNRHS Site 2724
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U KGQPSPSGAA V NSSESPPPSS Site 2485
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ----EETEAQ Q PFDDSLEHEK Site 2490
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo VRQVKEIIHQ F ILEQQKGNRV Site 2485
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar LKGVEGWHPR Y LKKENKTVSE Site 2738
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. RGQPAPLGAA V TDGSQAHTSS Site 2485
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d LQNYGELGPG T TGASSSGAGL Site 2792
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ALRSVLGTGA N GKVPVLRPLK Site 2522
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - --------TK  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - --------TK  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - --------ML  
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - --------PR  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO HNSSSRQVIP S HPLPAHIQIP Site 2892
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl VRQVKEIIHQ F ILEQQKGNRV Site 2485
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 TRKTLRKSRK H HCFTETSKLQ Site 2486
Homo.sapiens.HIPK3..Homeodomain.interacting.protei HQVPVGLNPR L LPSPTIHQTQ Site 2893
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O SEQQRVKRGT S PRPPEGGLGY Site 2488
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d GQIESSWHVS A LNRAEGAPYP Site 2884
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O SEQQRVKRGT S PRPPEGGLGY Site 2488
Naegleria.gruberi.LF4 SSSMTYQTTT T YNNFQSNKAP Site 2711
Saccharomyces.bayanus.IME2 KGSNFLGDAS L GDSFNSMPDF Site 2708
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -------EET E APPYDHSLDE Site 2242
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------V L AQVQQQLLQK Site 2486
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d GSSNIRQEPT P KGRPALQLPG Site 2863
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a EAPEPRPGRR M FGISVSQGAQ Site 2720
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific TSSSDFKRIL N ELVALQSPNS Site 2486
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 VSFGNEDAAP N RRLPLSDEKS Site 2760
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se SMFELREKMY Q FVMDRPALYG Site 2485
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. SASDYTWSTK T GRGQFSGRTY Site 2753
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. KGQPSPSGAA V NSSESLPPSS Site 2485
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------S R LPNGRFLPPL Site 2487
Penicillium.marneffei.IME2 GVSFGDIDNT P VRQRDVTKIP Site 2763
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a SPQFDLDVFI S RALKLCTKPE Site 2756
Drosophila.melanogaster.MAK GSHADSLAPN A QKEKPAVASS Site 2757
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de TKLQNYGELG P GTTGANSSGT Site 2790
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin KGQPSPSGAA V NSSESLPPSS Site 2485
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a VVKDQPSDAA V SSNATPSQSS Site 2483
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - --------ML  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------W T TSPFLNQPIH Site 2242
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen LSIQPSLNAI L IPPHLRSPAG Site 2486
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. EAEAPPPQIY D AQLEEREHAI Site 2485
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a SPQFDLDVFI S RALKLCTKPE Site 2756
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - HKLPDTTSIF  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -----SQNVF E RQEYKYPPRR Site 2486
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---DSLEGEK L SVEEWRKYTY Site 2485
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSNLNSHSAS P STTSSSSSTP Site 2521
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- T PGPQLPRPNS Site 2242
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ----ASRGSC S SAGPSTILLV Site 2242
Debaryomyces.hansenii.IME2 SWEGFNNLDI T NNDSVNNTEQ Site 2723
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - -----TRLPN  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -----VTNSS I GGLGVNRRIL Site 2485
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - -------FTQ  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --AHPSELPI P QRPGGPAPKA Site 2486
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----EPVAAP  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GASGAPSAVA A GGANAAVAGG Site 2706
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - --------DW  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. LPPEARPGRR M FSTSALQGAQ Site 2723
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d SRLIKKENKC L SESRIPSLAA Site 2731
Dictyostelium.discoideum.CDK10..Probable.cyclin.de KSFKNQNKKQ N NNFNNFVQNN Site 2486
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d TLQVRGTDAF S CPTQQSGFSF Site 2893
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa LAYHPEDPQA P YYTDLNNPNF Site 2489
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ---------C  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac GQPSPLGAAV I NGSQHPSSSS Site 2486
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---EETEAQQ P FDDALEHEKL Site 2486
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri TSVWQVKELV H RFITDQQQGK Site 2485
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha KGQPSPSGAA V NSSESLPPSS Site 2485
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 YTLYNNYGEK F KSDKSKEPRS Site 2699
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------D E PEAEPFDQSF Site 2486
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar PIPAEPRFQP L PSQPAKPAFS Site 2829
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - --SNTGSDSN  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D YRRKLAQNDQ E ELPVHHHKAC Site 2858
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U PVSMAQRLLP S PSLHPSQYQA Site 2779
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d QHDKPARKTL R QSRKHLTGLQ Site 2486
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen LNAILIPPHL R SPAGPASPLT Site 2486
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -----RRVTH E DNGDAKMGSL Site 2486
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------T P GNLLPRPNCS Site 2243
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --AHPSELPI P QRLGGPAPKA Site 2486
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi GTTEEMKYVL G QLVGLNSPNS Site 2486
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen LSSNPPLATI L IPPHARIQAA Site 2486
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ILPELVSSSM K ALLQEIKERF Site 2736
Aspergillus.fumigatus.IME2 TPSPSAKCDG V SFGQQDSTPC Site 2752
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ATSSGLIMTS D YQRSNPHAAY Site 2516
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ----EETEAQ Q SYDDSLEREK Site 2490
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S SMFELREKMY Q FVMDRPALYG Site 2485
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PVSMGPRVLP S PTIHPSQYPA Site 2893
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - -DEPVAEEPF  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - HALPESVSIF  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de VTRELDRKKR T RQPRKHLPPG Site 2486
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -------AEE V DAPAPEPYDH Site 2239
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -----EETEA E PYDQTFEGVE Site 2249
Candida.glabrata.IME2 IPISLVDQFG S DNLNYNIFEN Site 2745
Homo.sapiens.MAK..Serine.threonine.protein.kinase. TASEYTWNTK T GRGQFSGRTY Site 2753
Schizosaccharomyces.pombe.IME2 TSTVLSNDSS A ISSTFLDRDF Site 2781
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----DEPVSE  
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom LFDPSSCPGE W LSEPEWTLEG Site 2749
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - --------QK  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - VHQLHDTASI  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---DQMKRKA R SEGRSRRRQQ Site 2485
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ASPRHLPELF N FSPFELSIRP Site 2485
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD HRLEQLDAHN S GFSSMPVTLS Site 2515
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. PSPGYSSLKA M RPHPGRPFFH Site 2771
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act PQDGQADSAS L SASLLADWLE Site 2770
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------D E PVADPYDQSF Site 2486
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a FLLSKQLESI G TPQFHSPVGS Site 2804
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -----DEPKA Q KYDDSFDDVD Site 2490
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PVSVGPSLLT S ANVASAQYPH Site 2893
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - QLYQLPDEES  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD FDRIIKISID D GQKFPIAEYR Site 2262
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen LSSNPPLATI L IPPHARIQAA Site 2486
Drosophila.melanogaster.GSK3H..Putative.glycogen.s AVGEDAEDNL E EDVGDENDYD Site 2709
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ---SLNSEMP  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 RCHILDDMSM D SGGSQIPRGF Site 2735
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ---DEPIAEA  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - QLYQLPDEES  
Cryptococcus.neoformans.IME2 SEWADPLLRR D KRTTSASSAS Site 2792
Homo.sapiens.HIPK4..Homeodomain.interacting.protei FDPSSCPGEW L SEPDCTLESV Site 2750
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 YFQKYTTIID S DMDSDRSKSS Site 2672
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PVSVGPSLLT S ASVAPAQYQH Site 2893
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A NGQPGNGMNQ Q DYQVQQAQQA Site 2691
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---PAHHSEL P IPQRGGKHSR Site 2486
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. CKEPERSGRR H EKAPRRRTQG Site 2485
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. PTLQSVLGSG T NGRVPVLRPL Site 2521
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a PQDGQADSAS L SASLLADWLE Site 2770
Mus.musculus.ICK..Serine.threonine.protein.kinase. PPPGYSSLKA V RPHPGRPFFH Site 2771
Saccharomyces.castelli.IME2 HEQEQEEVEA G NTSLPFPDVA Site 2750
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------T P GCQLPRPNCP Site 2243
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------R L WELTDMSSIF Site 2242
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- A RTPDGKPLPP Site 2243
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- T PGPQLPRPNS Site 2242
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --PSDLKGML S THLTSMFEYL Site 2485
Homo.sapiens.HIPK2..Homeodomain.interacting.protei PVSMGPRVLP S PTIHPSQYPA Site 2893
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 SKVKDFIGTR E SEKEPRSVGV Site 2692
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin MNAEPNAKRV R LSGAGNQQDF Site 2507
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G HVSKASATPS S TSSTATSQDH Site 2487
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - HKLPDTTSIF  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - HALPESVSIF  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ----EETEAQ Q AYDDSLEHEK Site 2490
Candida.albicans.SSN3..Serine.threonine.protein.ki SGHQLSQQQN V QIQQVHQMQQ Site 2520
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GVAGSSYGGS Y KSKPAARGSV Site 2702
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA NFTAGELASK P SLRTALIPPH Site 2486
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---DDWPEPT A YDDSYDNATL Site 2250
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de YIDSYVPEYS I ARQSANQKTN Site 2729
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U HQVAVGINPR L LPSPTIHQTQ Site 2893
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d SEQQRVKRGT S PRPPEGGLGY Site 2488
Candida.dubliniensis.IME2 LLKVNEVLGT R ESEMEPRRAG Site 2691
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a GVKDQPSDAA V SSKATPSQSS Site 2486
Aspergillus.niger.IME2 CFGHSDATPC R RLPLAEEKTD Site 2763
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------D E PIAEPYDQSF Site 2486
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d MEVKQIKMLK R ESKKTESSKI Site 2752
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------R L WELTDMSSIF Site 2242
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 VSISNSSENS S SKPSIKSEDL Site 2747
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- E IEVYAPPPLP Site 2236
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P PDSRHGTGQL R DLPELFNFTR Site 2487
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - --------AR  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -----DEPQV Q KYDDSFDDVD Site 2490
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 RHHRCNILDD M SVDSSSSNRI Site 2724
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 RGDNVLGDAS L GDSFNSMPDF Site 2708
Schizosaccharomyces.japonicus.b.IME2 SNCSFANSVS N SATKSIYYTP Site 2782
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a FLFNKQLESI G IPQFHSPVGS Site 2804
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ------DTDT Y VKAQNLRIFD Site 2486
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --------DD E TEAEPYDDSF Site 2486
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de EVKQIKVLKR E SKKTDSSKIP Site 2759
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act EAPPPAITDK Q LDEREHSVEE Site 2486
Candida.albicans.IME2 LLKVNEVLGT R ESEMEPRRAG Site 2691
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------D E PVADPYDQSF Site 2240
Kluyveromyces.lactis.IME2 DSLDLQEQIP R NLLERAVQQR Site 2758
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PQDGQADSAS L SASLLADWLE Site 2770
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. KSQPSPSGAA V NSSESLPPSS Site 2485
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -----DEPEA E PYDESVEAKE Site 2490
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - --------ML  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -----DEPEA E PYDESVEAKE Site 2490
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME PIIVGPGNKL S SGIITGNKKS Site 2522
Neurospora.crassa.IME2 NIFFADHGKE A LTPQSLEPKK Site 2776
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 DEMSIDDAST D SHSQIPRDFI Site 2765
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi GATDEMKYVL G QLVGLNSPNS Site 2486
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - DDGKINQITT  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace YFTARRLNSK G LVLALAHTHR Site 2734
Schizosaccharomyces.pombe.b.IME2 SNKEGVASCL L LQKSGMEMTS Site 2719
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ---DEPIAEA  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom HQVPVGINPR L LPSPTIHQTQ Site 2893
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - --------VS  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac EAPPPKIPDK Q LDEREHTIEE Site 2495
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable VIRGRFTSSL E LISYADEILQ Site 2751
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 IETTSFLTPD L DKGNVWVRSE Site 2762
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -----ASGIT A GAAANALGGL Site 2486
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly LPPLFDFTRH E LSIAPQLNHK Site 2487
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ASPRHLPELF N FSPFELSIRP Site 2485
Species Residue at Site 4880
in 'msaprobs'
muscle

The residue for every species at site 4880 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo VRQVKEIIHQ F ILEQQKGNRV Site 2485
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 15:41, October 23rd 2019
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