cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 4879 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4879 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4879 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4879 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 NDSHQHLDSE K PSIFSSDILE Site 2792
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ---SDEPVCM  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 DESQIACQSP R TDHTNNLEID Site 2485
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ---------R  
Chlamydomonas.reinhardtii.LF4 TGGHAGGGVG G GGGGAVGVGG Site 2781
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g TIERHLPPLF N FNLAELSIRP Site 2485
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ---------M  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ---------N  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho TTTSGGLIMT S DYQRSNPHAA Site 2515
Schizosaccharomyces.octosporus.b.IME2 INHSLIPRPV R RNHGAPDFQA Site 2762
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - -----DEPIS  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ---------S  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ------AEVH  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei VPVSVGPSLL T SASVAPAQYQ Site 2892
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar KEHEKAARRP A KLTRKHVPGF Site 2485
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - -DEPVAEVPF  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ---------D  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ---------L  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ---------T  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - -VHQLEDTAS  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. WYTTVLIGTQ Q FSLVQNNFHW Site 2487
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET VKGQPSPSGA A VNSSESLPPS Site 2484
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 GYRVDEKTKK C SIPFVKPNRH Site 2723
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U VKGQPSPSGA A VNSSESPPPS Site 2484
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -----EETEA Q QPFDDSLEHE Site 2489
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo SVRQVKEIIH Q FILEQQKGNR Site 2484
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ELKGVEGWHP R YLKKENKTVS Site 2737
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. IRGQPAPLGA A VTDGSQAHTS Site 2484
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d KLQNYGELGP G TTGASSSGAG Site 2791
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. PALRSVLGTG A NGKVPVLRPL Site 2521
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ---------T  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ---------T  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ---------M  
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ---------P  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO AHNSSSRQVI P SHPLPAHIQI Site 2891
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl SVRQVKEIIH Q FILEQQKGNR Site 2484
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 PTRKTLRKSR K HHCFTETSKL Site 2485
Homo.sapiens.HIPK3..Homeodomain.interacting.protei VHQVPVGLNP R LLPSPTIHQT Site 2892
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O KSEQQRVKRG T SPRPPEGGLG Site 2487
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d PGQIESSWHV S ALNRAEGAPY Site 2883
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O KSEQQRVKRG T SPRPPEGGLG Site 2487
Naegleria.gruberi.LF4 VSSSMTYQTT T TYNNFQSNKA Site 2710
Saccharomyces.bayanus.IME2 HKGSNFLGDA S LGDSFNSMPD Site 2707
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --------EE T EAPPYDHSLD Site 2241
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- V LAQVQQQLLQ Site 2485
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d GGSSNIRQEP T PKGRPALQLP Site 2862
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a REAPEPRPGR R MFGISVSQGA Site 2719
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ETSSSDFKRI L NELVALQSPN Site 2485
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 GVSFGNEDAA P NRRLPLSDEK Site 2759
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se LSMFELREKM Y QFVMDRPALY Site 2484
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ASASDYTWST K TGRGQFSGRT Site 2752
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. VKGQPSPSGA A VNSSESLPPS Site 2484
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- S RLPNGRFLPP Site 2243
Penicillium.marneffei.IME2 DGVSFGDIDN T PVRQRDVTKI Site 2762
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ASPQFDLDVF I SRALKLCTKP Site 2755
Drosophila.melanogaster.MAK NGSHADSLAP N AQKEKPAVAS Site 2756
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ETKLQNYGEL G PGTTGANSSG Site 2789
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin VKGQPSPSGA A VNSSESLPPS Site 2484
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a GVVKDQPSDA A VSSNATPSQS Site 2482
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ---------M  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- W TTSPFLNQPI Site 2241
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ELSIQPSLNA I LIPPHLRSPA Site 2485
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. AEAEAPPPQI Y DAQLEEREHA Site 2484
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ASPQFDLDVF I SRALKLCTKP Site 2755
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - -HKLPDTTSI  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ------SQNV F ERQEYKYPPR Site 2485
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ----DSLEGE K LSVEEWRKYT Site 2484
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD VSSNLNSHSA S PSTTSSSSST Site 2520
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - TPGPQLPRPN  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -----ASRGS C SSAGPSTILL Site 2241
Debaryomyces.hansenii.IME2 YSWEGFNNLD I TNNDSVNNTE Site 2722
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ------TRLP  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ------VTNS S IGGLGVNRRI Site 2484
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - --------FT  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---AHPSELP I PQRPGGPAPK Site 2485
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - -----EPVAA  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GGASGAPSAV A AGGANAAVAG Site 2705
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ---------D  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. RLPPEARPGR R MFSTSALQGA Site 2722
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d NSRLIKKENK C LSESRIPSLA Site 2730
Dictyostelium.discoideum.CDK10..Probable.cyclin.de SKSFKNQNKK Q NNNFNNFVQN Site 2485
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d PTLQVRGTDA F SCPTQQSGFS Site 2892
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa MLAYHPEDPQ A PYYTDLNNPN Site 2488
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac RGQPSPLGAA V INGSQHPSSS Site 2485
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ----EETEAQ Q PFDDALEHEK Site 2485
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri LTSVWQVKEL V HRFITDQQQG Site 2484
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha VKGQPSPSGA A VNSSESLPPS Site 2484
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 CYTLYNNYGE K FKSDKSKEPR Site 2698
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- D EPEAEPFDQS Site 2243
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar HPIPAEPRFQ P LPSQPAKPAF Site 2828
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ---SNTGSDS  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D KYRRKLAQND Q EELPVHHHKA Site 2857
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U VPVSMAQRLL P SPSLHPSQYQ Site 2778
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d RQHDKPARKT L RQSRKHLTGL Site 2485
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen SLNAILIPPH L RSPAGPASPL Site 2485
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ------RRVT H EDNGDAKMGS Site 2485
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- T PGNLLPRPNC Site 2242
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---AHPSELP I PQRLGGPAPK Site 2485
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi KGTTEEMKYV L GQLVGLNSPN Site 2485
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ELSSNPPLAT I LIPPHARIQA Site 2485
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable EILPELVSSS M KALLQEIKER Site 2735
Aspergillus.fumigatus.IME2 PTPSPSAKCD G VSFGQQDSTP Site 2751
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan TATSSGLIMT S DYQRSNPHAA Site 2515
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -----EETEA Q QSYDDSLERE Site 2489
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S LSMFELREKM Y QFVMDRPALY Site 2484
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma VPVSMGPRVL P SPTIHPSQYP Site 2892
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - --DEPVAEEP  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - -HALPESVSI  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de SVTRELDRKK R TRQPRKHLPP Site 2485
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --------AE E VDAPAPEPYD Site 2238
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ------EETE A EPYDQTFEGV Site 2243
Candida.glabrata.IME2 TIPISLVDQF G SDNLNYNIFE Site 2744
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ATASEYTWNT K TGRGQFSGRT Site 2752
Schizosaccharomyces.pombe.IME2 GTSTVLSNDS S AISSTFLDRD Site 2780
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - -----DEPVS  
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ELFDPSSCPG E WLSEPEWTLE Site 2748
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ---------Q  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - -VHQLHDTAS  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ----DQMKRK A RSEGRSRRRQ Site 2484
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH DASPRHLPEL F NFSPFELSIR Site 2484
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD NHRLEQLDAH N SGFSSMPVTL Site 2514
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. DPSPGYSSLK A MRPHPGRPFF Site 2770
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act GPQDGQADSA S LSASLLADWL Site 2769
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- D EPVADPYDQS Site 2243
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a EFLLSKQLES I GTPQFHSPVG Site 2803
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ------DEPK A QKYDDSFDDV Site 2489
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U VPVSVGPSLL T SANVASAQYP Site 2892
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -QLYQLPDEE  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD HFDRIIKISI D DGQKFPIAEY Site 2261
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ELSSNPPLAT I LIPPHARIQA Site 2485
Drosophila.melanogaster.GSK3H..Putative.glycogen.s YAVGEDAEDN L EEDVGDENDY Site 2708
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----SLNSEM  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 QRCHILDDMS M DSGGSQIPRG Site 2734
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----DEPIAE  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -QLYQLPDEE  
Cryptococcus.neoformans.IME2 RSEWADPLLR R DKRTTSASSA Site 2791
Homo.sapiens.HIPK4..Homeodomain.interacting.protei LFDPSSCPGE W LSEPDCTLES Site 2749
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 SYFQKYTTII D SDMDSDRSKS Site 2671
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom VPVSVGPSLL T SASVAPAQYQ Site 2892
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A PNGQPGNGMN Q QDYQVQQAQQ Site 2690
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ----PAHHSE L PIPQRGGKHS Site 2485
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. GCKEPERSGR R HEKAPRRRTQ Site 2484
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. SPTLQSVLGS G TNGRVPVLRP Site 2520
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a GPQDGQADSA S LSASLLADWL Site 2769
Mus.musculus.ICK..Serine.threonine.protein.kinase. APPPGYSSLK A VRPHPGRPFF Site 2770
Saccharomyces.castelli.IME2 NHEQEQEEVE A GNTSLPFPDV Site 2749
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- T PGCQLPRPNC Site 2242
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- R LWELTDMSSI Site 2241
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ARTPDGKPLP  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - TPGPQLPRPN  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---PSDLKGM L STHLTSMFEY Site 2484
Homo.sapiens.HIPK2..Homeodomain.interacting.protei VPVSMGPRVL P SPTIHPSQYP Site 2892
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 MSKVKDFIGT R ESEKEPRSVG Site 2691
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QMNAEPNAKR V RLSGAGNQQD Site 2506
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G PHVSKASATP S STSSTATSQD Site 2486
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - -HKLPDTTSI  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - -HALPESVSI  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -----EETEA Q QAYDDSLEHE Site 2489
Candida.albicans.SSN3..Serine.threonine.protein.ki NSGHQLSQQQ N VQIQQVHQMQ Site 2519
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GGVAGSSYGG S YKSKPAARGS Site 2701
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA FNFTAGELAS K PSLRTALIPP Site 2485
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ----DDWPEP T AYDDSYDNAT Site 2249
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de KYIDSYVPEY S IARQSANQKT Site 2728
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U VHQVAVGINP R LLPSPTIHQT Site 2892
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d KSEQQRVKRG T SPRPPEGGLG Site 2487
Candida.dubliniensis.IME2 WLLKVNEVLG T RESEMEPRRA Site 2690
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a NGVKDQPSDA A VSSKATPSQS Site 2485
Aspergillus.niger.IME2 VCFGHSDATP C RRLPLAEEKT Site 2762
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- D EPIAEPYDQS Site 2243
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d GMEVKQIKML K RESKKTESSK Site 2751
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- R LWELTDMSSI Site 2241
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 EVSISNSSEN S SSKPSIKSED Site 2746
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - EIEVYAPPPL  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P LPDSRHGTGQ L RDLPELFNFT Site 2486
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ---------A  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ------DEPQ V QKYDDSFDDV Site 2489
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 VRHHRCNILD D MSVDSSSSNR Site 2723
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 HRGDNVLGDA S LGDSFNSMPD Site 2707
Schizosaccharomyces.japonicus.b.IME2 KSNCSFANSV S NSATKSIYYT Site 2781
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a EFLFNKQLES I GIPQFHSPVG Site 2803
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -------DTD T YVKAQNLRIF Site 2485
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------D D ETEAEPYDDS Site 2243
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de MEVKQIKVLK R ESKKTDSSKI Site 2758
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act VEAPPPAITD K QLDEREHSVE Site 2485
Candida.albicans.IME2 WLLKVNEVLG T RESEMEPRRA Site 2690
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- D EPVADPYDQS Site 2239
Kluyveromyces.lactis.IME2 DDSLDLQEQI P RNLLERAVQQ Site 2757
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina GPQDGQADSA S LSASLLADWL Site 2769
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. VKSQPSPSGA A VNSSESLPPS Site 2484
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ------DEPE A EPYDESVEAK Site 2489
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ---------M  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ------DEPE A EPYDESVEAK Site 2489
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME EPIIVGPGNK L SSGIITGNKK Site 2521
Neurospora.crassa.IME2 QNIFFADHGK E ALTPQSLEPK Site 2775
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 IDEMSIDDAS T DSHSQIPRDF Site 2764
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi RGATDEMKYV L GQLVGLNSPN Site 2485
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - -DDGKINQIT  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace AYFTARRLNS K GLVLALAHTH Site 2733
Schizosaccharomyces.pombe.b.IME2 ESNKEGVASC L LLQKSGMEMT Site 2718
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----DEPIAE  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom VHQVPVGINP R LLPSPTIHQT Site 2892
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ---------V  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac AEAPPPKIPD K QLDEREHTIE Site 2494
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable QVIRGRFTSS L ELISYADEIL Site 2750
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 RIETTSFLTP D LDKGNVWVRS Site 2761
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ------ASGI T AGAAANALGG Site 2485
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly DLPPLFDFTR H ELSIAPQLNH Site 2486
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk DASPRHLPEL F NFSPFELSIR Site 2484
Species Residue at Site 4879
in 'msaprobs'
muscle

The residue for every species at site 4879 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo SVRQVKEIIH Q FILEQQKGNR Site 2484
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 16:14, October 23rd 2019
Questions/Comments? help@phylobot.com