cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4878 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4878 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4878 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4878 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 KNDSHQHLDS E KPSIFSSDIL Site 2791
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ----SDEPVC  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 VDESQIACQS P RTDHTNNLEI Site 2484
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 VTGGHAGGGV G GGGGGAVGVG Site 2780
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g GTIERHLPPL F NFNLAELSIR Site 2484
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho PTTTSGGLIM T SDYQRSNPHA Site 2514
Schizosaccharomyces.octosporus.b.IME2 GINHSLIPRP V RRNHGAPDFQ Site 2761
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ------DEPI  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - -------AEV  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei QVPVSVGPSL L TSASVAPAQY Site 2891
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar GKEHEKAARR P AKLTRKHVPG Site 2484
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - --DEPVAEVP  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - --VHQLEDTA  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. HWYTTVLIGT Q QFSLVQNNFH Site 2486
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET VVKGQPSPSG A AVNSSESLPP Site 2483
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 QGYRVDEKTK K CSIPFVKPNR Site 2722
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U VVKGQPSPSG A AVNSSESPPP Site 2483
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ------EETE A QQPFDDSLEH Site 2488
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo SSVRQVKEII H QFILEQQKGN Site 2483
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar PELKGVEGWH P RYLKKENKTV Site 2736
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. VIRGQPAPLG A AVTDGSQAHT Site 2483
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d TKLQNYGELG P GTTGASSSGA Site 2790
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. SPALRSVLGT G ANGKVPVLRP Site 2520
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO PAHNSSSRQV I PSHPLPAHIQ Site 2890
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl SSVRQVKEII H QFILEQQKGN Site 2483
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 KPTRKTLRKS R KHHCFTETSK Site 2484
Homo.sapiens.HIPK3..Homeodomain.interacting.protei IVHQVPVGLN P RLLPSPTIHQ Site 2891
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O AKSEQQRVKR G TSPRPPEGGL Site 2486
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d LPGQIESSWH V SALNRAEGAP Site 2882
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O AKSEQQRVKR G TSPRPPEGGL Site 2486
Naegleria.gruberi.LF4 PVSSSMTYQT T TTYNNFQSNK Site 2709
Saccharomyces.bayanus.IME2 YHKGSNFLGD A SLGDSFNSMP Site 2706
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------E E TEAPPYDHSL Site 2240
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - VLAQVQQQLL  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d TGGSSNIRQE P TPKGRPALQL Site 2861
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a PREAPEPRPG R RMFGISVSQG Site 2718
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific AETSSSDFKR I LNELVALQSP Site 2484
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 DGVSFGNEDA A PNRRLPLSDE Site 2758
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se RLSMFELREK M YQFVMDRPAL Site 2483
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. GASASDYTWS T KTGRGQFSGR Site 2751
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. VVKGQPSPSG A AVNSSESLPP Site 2483
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - SRLPNGRFLP  
Penicillium.marneffei.IME2 RDGVSFGDID N TPVRQRDVTK Site 2761
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a GASPQFDLDV F ISRALKLCTK Site 2754
Drosophila.melanogaster.MAK NNGSHADSLA P NAQKEKPAVA Site 2755
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de AETKLQNYGE L GPGTTGANSS Site 2788
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin VVKGQPSPSG A AVNSSESLPP Site 2483
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a NGVVKDQPSD A AVSSNATPSQ Site 2481
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - WTTSPFLNQP  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen GELSIQPSLN A ILIPPHLRSP Site 2484
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -AEAEAPPPQ I YDAQLEEREH Site 2483
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a GASPQFDLDV F ISRALKLCTK Site 2754
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - --HKLPDTTS  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -------SQN V FERQEYKYPP Site 2484
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -----DSLEG E KLSVEEWRKY Site 2483
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD NVSSNLNSHS A SPSTTSSSSS Site 2519
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - -TPGPQLPRP  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ------ASRG S CSSAGPSTIL Site 2240
Debaryomyces.hansenii.IME2 DYSWEGFNNL D ITNNDSVNNT Site 2721
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - -------TRL  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -------VTN S SIGGLGVNRR Site 2483
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ---------F  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ----AHPSEL P IPQRPGGPAP Site 2484
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ------EPVA  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg SGGASGAPSA V AAGGANAAVA Site 2704
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. PRLPPEARPG R RMFSTSALQG Site 2721
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d RNSRLIKKEN K CLSESRIPSL Site 2729
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ISKSFKNQNK K QNNNFNNFVQ Site 2484
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d CPTLQVRGTD A FSCPTQQSGF Site 2891
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa EMLAYHPEDP Q APYYTDLNNP Site 2487
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac IRGQPSPLGA A VINGSQHPSS Site 2484
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -----EETEA Q QPFDDALEHE Site 2484
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri SLTSVWQVKE L VHRFITDQQQ Site 2483
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha VVKGQPSPSG A AVNSSESLPP Site 2483
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 GCYTLYNNYG E KFKSDKSKEP Site 2697
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - DEPEAEPFDQ  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar NHPIPAEPRF Q PLPSQPAKPA Site 2827
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----SNTGSD  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D EKYRRKLAQN D QEELPVHHHK Site 2856
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U IVPVSMAQRL L PSPSLHPSQY Site 2777
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d TRQHDKPARK T LRQSRKHLTG Site 2484
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen PSLNAILIPP H LRSPAGPASP Site 2484
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -------RRV T HEDNGDAKMG Site 2484
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - TPGNLLPRPN  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ----AHPSEL P IPQRLGGPAP Site 2484
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi AKGTTEEMKY V LGQLVGLNSP Site 2484
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen QELSSNPPLA T ILIPPHARIQ Site 2484
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable EEILPELVSS S MKALLQEIKE Site 2734
Aspergillus.fumigatus.IME2 YPTPSPSAKC D GVSFGQQDST Site 2750
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan PTATSSGLIM T SDYQRSNPHA Site 2514
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ------EETE A QQSYDDSLER Site 2488
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S RLSMFELREK M YQFVMDRPAL Site 2483
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma QVPVSMGPRV L PSPTIHPSQY Site 2891
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ---DEPVAEE  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - --HALPESVS  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ESVTRELDRK K RTRQPRKHLP Site 2484
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------A E EVDAPAPEPY Site 2237
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -------EET E AEPYDQTFEG Site 2242
Candida.glabrata.IME2 RTIPISLVDQ F GSDNLNYNIF Site 2743
Homo.sapiens.MAK..Serine.threonine.protein.kinase. NATASEYTWN T KTGRGQFSGR Site 2751
Schizosaccharomyces.pombe.IME2 SGTSTVLSND S SAISSTFLDR Site 2779
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ------DEPV  
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom PELFDPSSCP G EWLSEPEWTL Site 2747
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - --VHQLHDTA  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -----DQMKR K ARSEGRSRRR Site 2483
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH PDASPRHLPE L FNFSPFELSI Site 2483
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD SNHRLEQLDA H NSGFSSMPVT Site 2513
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. PDPSPGYSSL K AMRPHPGRPF Site 2769
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act DGPQDGQADS A SLSASLLADW Site 2768
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - DEPVADPYDQ  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a GEFLLSKQLE S IGTPQFHSPV Site 2802
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -------DEP K AQKYDDSFDD Site 2488
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U QVPVSVGPSL L TSANVASAQY Site 2891
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --QLYQLPDE  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD PHFDRIIKIS I DDGQKFPIAE Site 2260
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen QELSSNPPLA T ILIPPHARIQ Site 2484
Drosophila.melanogaster.GSK3H..Putative.glycogen.s SYAVGEDAED N LEEDVGDEND Site 2707
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - -----SLNSE  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 AQRCHILDDM S MDSGGSQIPR Site 2733
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - -----DEPIA  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --QLYQLPDE  
Cryptococcus.neoformans.IME2 RRSEWADPLL R RDKRTTSASS Site 2790
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ELFDPSSCPG E WLSEPDCTLE Site 2748
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 KSYFQKYTTI I DSDMDSDRSK Site 2670
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom QVPVSVGPSL L TSASVAPAQY Site 2891
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A GPNGQPGNGM N QQDYQVQQAQ Site 2689
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -----PAHHS E LPIPQRGGKH Site 2484
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. EGCKEPERSG R RHEKAPRRRT Site 2483
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. SSPTLQSVLG S GTNGRVPVLR Site 2519
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a DGPQDGQADS A SLSASLLADW Site 2768
Mus.musculus.ICK..Serine.threonine.protein.kinase. AAPPPGYSSL K AVRPHPGRPF Site 2769
Saccharomyces.castelli.IME2 MNHEQEQEEV E AGNTSLPFPD Site 2748
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - TPGCQLPRPN  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - RLWELTDMSS  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - -ARTPDGKPL  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - -TPGPQLPRP  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ----PSDLKG M LSTHLTSMFE Site 2483
Homo.sapiens.HIPK2..Homeodomain.interacting.protei QVPVSMGPRV L PSPTIHPSQY Site 2891
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 WMSKVKDFIG T RESEKEPRSV Site 2690
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQMNAEPNAK R VRLSGAGNQQ Site 2505
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G PPHVSKASAT P SSTSSTATSQ Site 2485
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - --HKLPDTTS  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - --HALPESVS  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ------EETE A QQAYDDSLEH Site 2488
Candida.albicans.SSN3..Serine.threonine.protein.ki NNSGHQLSQQ Q NVQIQQVHQM Site 2518
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF YGGVAGSSYG G SYKSKPAARG Site 2700
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA LFNFTAGELA S KPSLRTALIP Site 2484
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -----DDWPE P TAYDDSYDNA Site 2243
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de IKYIDSYVPE Y SIARQSANQK Site 2727
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U IVHQVAVGIN P RLLPSPTIHQ Site 2891
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d AKSEQQRVKR G TSPRPPEGGL Site 2486
Candida.dubliniensis.IME2 PWLLKVNEVL G TRESEMEPRR Site 2689
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a KNGVKDQPSD A AVSSKATPSQ Site 2484
Aspergillus.niger.IME2 GVCFGHSDAT P CRRLPLAEEK Site 2761
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - DEPIAEPYDQ  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d KGMEVKQIKM L KRESKKTESS Site 2750
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - RLWELTDMSS  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 TEVSISNSSE N SSSKPSIKSE Site 2745
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - -EIEVYAPPP  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P KLPDSRHGTG Q LRDLPELFNF Site 2485
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -------DEP Q VQKYDDSFDD Site 2488
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 QVRHHRCNIL D DMSVDSSSSN Site 2722
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 HHRGDNVLGD A SLGDSFNSMP Site 2706
Schizosaccharomyces.japonicus.b.IME2 GKSNCSFANS V SNSATKSIYY Site 2780
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a GEFLFNKQLE S IGIPQFHSPV Site 2802
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --------DT D TYVKAQNLRI Site 2484
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- D DETEAEPYDD Site 2242
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de GMEVKQIKVL K RESKKTDSSK Site 2757
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act EVEAPPPAIT D KQLDEREHSV Site 2484
Candida.albicans.IME2 PWLLKVNEVL G TRESEMEPRR Site 2689
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - DEPVADPYDQ  
Kluyveromyces.lactis.IME2 IDDSLDLQEQ I PRNLLERAVQ Site 2756
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina DGPQDGQADS A SLSASLLADW Site 2768
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. VVKSQPSPSG A AVNSSESLPP Site 2483
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -------DEP E AEPYDESVEA Site 2488
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -------DEP E AEPYDESVEA Site 2488
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME DEPIIVGPGN K LSSGIITGNK Site 2520
Neurospora.crassa.IME2 GQNIFFADHG K EALTPQSLEP Site 2774
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 AIDEMSIDDA S TDSHSQIPRD Site 2763
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ARGATDEMKY V LGQLVGLNSP Site 2484
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - --DDGKINQI  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace TAYFTARRLN S KGLVLALAHT Site 2732
Schizosaccharomyces.pombe.b.IME2 DESNKEGVAS C LLLQKSGMEM Site 2717
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - -----DEPIA  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom IVHQVPVGIN P RLLPSPTIHQ Site 2891
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac EAEAPPPKIP D KQLDEREHTI Site 2493
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable VQVIRGRFTS S LELISYADEI Site 2749
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 IRIETTSFLT P DLDKGNVWVR Site 2760
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -------ASG I TAGAAANALG Site 2484
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly RDLPPLFDFT R HELSIAPQLN Site 2485
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk PDASPRHLPE L FNFSPFELSI Site 2483
Species Residue at Site 4878
in 'msaprobs'
muscle

The residue for every species at site 4878 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo SSVRQVKEII H QFILEQQKGN Site 2483
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 16:28, August 5th 2020
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