cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4875 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4875 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4875 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4875 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 DEEKNDSHQH L DSEKPSIFSS Site 2788
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - -------SDE  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 DIEVDESQIA C QSPRTDHTNN Site 2481
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 GMAVTGGHAG G GVGGGGGGAV Site 2777
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g RDEGTIERHL P PLFNFNLAEL Site 2481
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho VVPPTTTSGG L IMTSDYQRSN Site 2511
Schizosaccharomyces.octosporus.b.IME2 KIIGINHSLI P RPVRRNHGAP Site 2758
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ---------D  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei LVHQVPVSVG P SLLTSASVAP Site 2888
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar GDVGKEHEKA A RRPAKLTRKH Site 2481
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - -----DEPVA  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - -----VHQLE  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. NSSHWYTTVL I GTQQFSLVQN Site 2483
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET KNGVVKGQPS P SGAAVNSSES Site 2480
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 IPIQGYRVDE K TKKCSIPFVK Site 2719
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U KNGVVKGQPS P SGAAVNSSES Site 2480
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------E E TEAQQPFDDS Site 2485
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo KNLSSVRQVK E IIHQFILEQQ Site 2480
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar NHLPELKGVE G WHPRYLKKEN Site 2733
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. KNGVIRGQPA P LGAAVTDGSQ Site 2480
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d HAETKLQNYG E LGPGTTGASS Site 2787
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. SCSSPALRSV L GTGANGKVPV Site 2517
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO APPPAHNSSS R QVIPSHPLPA Site 2887
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl KNLSSVRQVK E IIHQFILEQQ Site 2480
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 EHNKPTRKTL R KSRKHHCFTE Site 2481
Homo.sapiens.HIPK3..Homeodomain.interacting.protei PSGIVHQVPV G LNPRLLPSPT Site 2888
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O TWPAKSEQQR V KRGTSPRPPE Site 2483
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d NYPLPGQIES S WHVSALNRAE Site 2879
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O TWPAKSEQQR V KRGTSPRPPE Site 2483
Naegleria.gruberi.LF4 DHPPVSSSMT Y QTTTTYNNFQ Site 2706
Saccharomyces.bayanus.IME2 EKPYHKGSNF L GDASLGDSFN Site 2703
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - -EETEAPPYD  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ---VLAQVQQ  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d SQATGGSSNI R QEPTPKGRPA Site 2858
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a SRLPREAPEP R PGRRMFGISV Site 2715
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific PEPAETSSSD F KRILNELVAL Site 2481
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 AKCDGVSFGN E DAAPNRRLPL Site 2755
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se DMSRLSMFEL R EKMYQFVMDR Site 2480
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. APLGASASDY T WSTKTGRGQF Site 2748
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. KNGVVKGQPS P SGAAVNSSES Site 2480
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ---SRLPNGR  
Penicillium.marneffei.IME2 SAKRDGVSFG D IDNTPVRQRD Site 2758
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a VDGGASPQFD L DVFISRALKL Site 2751
Drosophila.melanogaster.MAK LEVNNGSHAD S LAPNAQKEKP Site 2752
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de VVHAETKLQN Y GELGPGTTGA Site 2785
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin KNGVVKGQPS P SGAAVNSSES Site 2480
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a RSKNGVVKDQ P SDAAVSSNAT Site 2478
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ---WTTSPFL  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen FSAGELSIQP S LNAILIPPHL Site 2481
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ----AEAEAP P PQIYDAQLEE Site 2243
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a IDGGASPQFD L DVFISRALKL Site 2751
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - -----HKLPD  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- S QNVFERQEYK Site 2242
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --------DS L EGEKLSVEEW Site 2480
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SNANVSSNLN S HSASPSTTSS Site 2516
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----TPGPQL  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------A S RGSCSSAGPS Site 2237
Debaryomyces.hansenii.IME2 NDHDYSWEGF N NLDITNNDSV Site 2718
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- V TNSSIGGLGV Site 2480
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -------AHP S ELPIPQRPGG Site 2243
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ---------E  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg NSSSGGASGA P SAVAAGGANA Site 2701
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. QVPPRLPPEA R PGRRMFSTSA Site 2718
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d GIARNSRLIK K ENKCLSESRI Site 2726
Dictyostelium.discoideum.CDK10..Probable.cyclin.de FPTISKSFKN Q NKKQNNNFNN Site 2481
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d TSMCPTLQVR G TDAFSCPTQQ Site 2888
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa IYNEMLAYHP E DPQAPYYTDL Site 2484
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac NGVIRGQPSP L GAAVINGSQH Site 2481
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --------EE T EAQQPFDDAL Site 2481
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri YEKSLTSVWQ V KELVHRFITD Site 2480
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha KNGVVKGQPS P SGAAVNSSES Site 2480
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 LENGCYTLYN N YGEKFKSDKS Site 2694
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ---DEPEAEP  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar LSSNHPIPAE P RFQPLPSQPA Site 2824
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - -------SNT  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D RQEEKYRRKL A QNDQEELPVH Site 2853
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U PASIVPVSMA Q RLLPSPSLHP Site 2774
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d GELTRQHDKP A RKTLRQSRKH Site 2481
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen SIQPSLNAIL I PPHLRSPAGP Site 2481
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- R RVTHEDNGDA Site 2481
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ---TPGNLLP  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -------AHP S ELPIPQRLGG Site 2243
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi NQMAKGTTEE M KYVLGQLVGL Site 2481
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen FTTQELSSNP P LATILIPPHA Site 2481
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ASYEEILPEL V SSSMKALLQE Site 2731
Aspergillus.fumigatus.IME2 PSPYPTPSPS A KCDGVSFGQQ Site 2747
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan VVPPTATSSG L IMTSDYQRSN Site 2511
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------E E TEAQQSYDDS Site 2485
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S DMSRLSMFEL R EKMYQFVMDR Site 2480
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma IVHQVPVSMG P RVLPSPTIHP Site 2888
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ------DEPV  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - -----HALPE  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -ESESVTREL D RKKRTRQPRK Site 2481
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - -AEEVDAPAP  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- E ETEAEPYDQT Site 2239
Candida.glabrata.IME2 LEPRTIPISL V DQFGSDNLNY Site 2740
Homo.sapiens.MAK..Serine.threonine.protein.kinase. APLNATASEY T WNTKTGRGQF Site 2748
Schizosaccharomyces.pombe.IME2 TNSSGTSTVL S NDSSAISSTF Site 2776
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ---------D  
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom RPGPELFDPS S CPGEWLSEPE Site 2744
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - -----VHQLH  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --------DQ M KRKARSEGRS Site 2243
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH SRNPDASPRH L PELFNFSPFE Site 2480
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD AANSNHRLEQ L DAHNSGFSSM Site 2510
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. APIPDPSPGY S SLKAMRPHPG Site 2766
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act GVADGPQDGQ A DSASLSASLL Site 2765
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ---DEPVADP  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a SGGGEFLLSK Q LESIGTPQFH Site 2799
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- D EPKAQKYDDS Site 2243
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U LVHQVPVSVG P SLLTSANVAS Site 2888
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -----QLYQL  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -EEPHFDRII K ISIDDGQKFP Site 2257
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen FTTQELSSNP P LATILIPPHA Site 2481
Drosophila.melanogaster.GSK3H..Putative.glycogen.s AAESYAVGED A EDNLEEDVGD Site 2704
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - --------SL  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 PELAQRCHIL D DMSMDSGGSQ Site 2730
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - --------DE  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -----QLYQL  
Cryptococcus.neoformans.IME2 GPRRRSEWAD P LLRRDKRTTS Site 2787
Homo.sapiens.HIPK4..Homeodomain.interacting.protei PDPELFDPSS C PGEWLSEPDC Site 2745
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 MVSKSYFQKY T TIIDSDMDSD Site 2530
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom LVHQVPVSVG P SLLTSASVAP Site 2888
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A RMSGPNGQPG N GMNQQDYQVQ Site 2686
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --------PA H HSELPIPQRG Site 2243
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -DLEGCKEPE R SGRRHEKAPR Site 2480
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. SSYSSPTLQS V LGSGTNGRVP Site 2516
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a GVADGPQDGQ A DSASLSASLL Site 2765
Mus.musculus.ICK..Serine.threonine.protein.kinase. APLAAPPPGY S SLKAVRPHPG Site 2766
Saccharomyces.castelli.IME2 TFPMNHEQEQ E EVEAGNTSLP Site 2745
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ---TPGCQLP  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ---RLWELTD  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ----ARTPDG  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----TPGPQL  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -------PSD L KGMLSTHLTS Site 2480
Homo.sapiens.HIPK2..Homeodomain.interacting.protei IVHQVPVSMG P RVLPSPTIHP Site 2888
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 SHPWMSKVKD F IGTRESEKEP Site 2687
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQMNAEP N AKRVRLSGAG Site 2502
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ILLPPHVSKA S ATPSSTSSTA Site 2482
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - -----HKLPD  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - -----HALPE  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------E E TEAQQAYDDS Site 2485
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNSGHQL S QQQNVQIQQV Site 2515
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GGGYGGVAGS S YGGSYKSKPA Site 2697
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA LPPLFNFTAG E LASKPSLRTA Site 2481
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --------DD W PEPTAYDDSY Site 2240
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de QHNIKYIDSY V PEYSIARQSA Site 2724
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U PSGIVHQVAV G INPRLLPSPT Site 2888
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d TWPAKSEQQR V KRGTSPRPPE Site 2483
Candida.dubliniensis.IME2 FAQPWLLKVN E VLGTRESEME Site 2686
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ERSKNGVKDQ P SDAAVSSKAT Site 2481
Aspergillus.niger.IME2 KCDGVCFGHS D ATPCRRLPLA Site 2758
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ---DEPIAEP  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d KDTKGMEVKQ I KMLKRESKKT Site 2747
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ---RLWELTD  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 LSLTEVSISN S SENSSSKPSI Site 2742
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----EIEVYA  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P --TKLPDSRH G TGQLRDLPEL Site 2482
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- D EPQVQKYDDS Site 2243
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 TANQVRHHRC N ILDDMSVDSS Site 2719
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 DRSHHRGDNV L GDASLGDSFN Site 2703
Schizosaccharomyces.japonicus.b.IME2 SYSGKSNCSF A NSVSNSATKS Site 2777
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a NNSGEFLFNK Q LESIGIPQFH Site 2799
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - DTDTYVKAQN  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - --DDETEAEP  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de EMKGMEVKQI K VLKRESKKTD Site 2754
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --SEVEAPPP A ITDKQLDERE Site 2481
Candida.albicans.IME2 FAQPWLLKVN E VLGTRESEME Site 2686
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ---DEPVADP  
Kluyveromyces.lactis.IME2 QMAIDDSLDL Q EQIPRNLLER Site 2753
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina GVADGPQDGQ A DSASLSASLL Site 2765
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. KNGVVKSQPS P SGAAVNSSES Site 2480
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- D EPEAEPYDES Site 2243
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- D EPEAEPYDES Site 2243
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME LGRDEPIIVG P GNKLSSGIIT Site 2517
Neurospora.crassa.IME2 SASGQNIFFA D HGKEALTPQS Site 2771
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 NCHAIDEMSI D DASTDSHSQI Site 2760
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi SQMARGATDE M KYVLGQLVGL Site 2481
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - -----DDGKI  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace HKKTAYFTAR R LNSKGLVLAL Site 2729
Schizosaccharomyces.pombe.b.IME2 SQPDESNKEG V ASCLLLQKSG Site 2714
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - --------DE  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom PSGIVHQVPV G INPRLLPSPT Site 2888
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --SEAEAPPP K IPDKQLDERE Site 2490
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable KDLVQVIRGR F TSSLELISYA Site 2746
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 SSDIRIETTS F LTPDLDKGNV Site 2757
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- A SGITAGAAAN Site 2481
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly GTVRDLPPLF D FTRHELSIAP Site 2482
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk SRNPDASPRH L PELFNFSPFE Site 2480
Species Residue at Site 4875
in 'msaprobs'
muscle

The residue for every species at site 4875 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo KNLSSVRQVK E IIHQFILEQQ Site 2480
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 16:07, October 23rd 2019
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