cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 4874 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4874 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4874 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4874 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ADEEKNDSHQ H LDSEKPSIFS Site 2787
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - --------SD  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 YDIEVDESQI A CQSPRTDHTN Site 2480
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 AGMAVTGGHA G GGVGGGGGGA Site 2776
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g SRDEGTIERH L PPLFNFNLAE Site 2480
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho RVVPPTTTSG G LIMTSDYQRS Site 2510
Schizosaccharomyces.octosporus.b.IME2 LKIIGINHSL I PRPVRRNHGA Site 2757
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei TLVHQVPVSV G PSLLTSASVA Site 2887
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -GDVGKEHEK A ARRPAKLTRK Site 2480
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ------DEPV  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ------VHQL  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. HNSSHWYTTV L IGTQQFSLVQ Site 2482
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET TKNGVVKGQP S PSGAAVNSSE Site 2479
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 TIPIQGYRVD E KTKKCSIPFV Site 2718
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U TKNGVVKGQP S PSGAAVNSSE Site 2479
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- E ETEAQQPFDD Site 2243
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo EKNLSSVRQV K EIIHQFILEQ Site 2479
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar LNHLPELKGV E GWHPRYLKKE Site 2732
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. AKNGVIRGQP A PLGAAVTDGS Site 2479
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d VHAETKLQNY G ELGPGTTGAS Site 2786
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. SSCSSPALRS V LGTGANGKVP Site 2516
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO VAPPPAHNSS S RQVIPSHPLP Site 2886
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl EKNLSSVRQV K EIIHQFILEQ Site 2479
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 KEHNKPTRKT L RKSRKHHCFT Site 2480
Homo.sapiens.HIPK3..Homeodomain.interacting.protei HPSGIVHQVP V GLNPRLLPSP Site 2887
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O PTWPAKSEQQ R VKRGTSPRPP Site 2482
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d HNYPLPGQIE S SWHVSALNRA Site 2878
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O PTWPAKSEQQ R VKRGTSPRPP Site 2482
Naegleria.gruberi.LF4 NDHPPVSSSM T YQTTTTYNNF Site 2705
Saccharomyces.bayanus.IME2 TEKPYHKGSN F LGDASLGDSF Site 2702
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - --EETEAPPY  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----VLAQVQ  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d LSQATGGSSN I RQEPTPKGRP Site 2857
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a PSRLPREAPE P RPGRRMFGIS Site 2714
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific APEPAETSSS D FKRILNELVA Site 2480
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 SAKCDGVSFG N EDAAPNRRLP Site 2754
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se KDMSRLSMFE L REKMYQFVMD Site 2479
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. LAPLGASASD Y TWSTKTGRGQ Site 2747
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. TKNGVVKGQP S PSGAAVNSSE Site 2479
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ----SRLPNG  
Penicillium.marneffei.IME2 PSAKRDGVSF G DIDNTPVRQR Site 2757
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a PVDGGASPQF D LDVFISRALK Site 2750
Drosophila.melanogaster.MAK SLEVNNGSHA D SLAPNAQKEK Site 2751
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de SVVHAETKLQ N YGELGPGTTG Site 2784
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin TKNGVVKGQP S PSGAAVNSSE Site 2479
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ERSKNGVVKD Q PSDAAVSSNA Site 2477
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----WTTSPF  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen NFSAGELSIQ P SLNAILIPPH Site 2480
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -----AEAEA P PPQIYDAQLE Site 2242
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a PIDGGASPQF D LDVFISRALK Site 2750
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ------HKLP  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - SQNVFERQEY  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------D S LEGEKLSVEE Site 2479
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD NSNANVSSNL N SHSASPSTTS Site 2515
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - -----TPGPQ  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- A SRGSCSSAGP Site 2236
Debaryomyces.hansenii.IME2 KNDHDYSWEG F NNLDITNNDS Site 2717
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - VTNSSIGGLG  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --------AH P SELPIPQRPG Site 2242
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg NNSSSGGASG A PSAVAAGGAN Site 2700
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. QQVPPRLPPE A RPGRRMFSTS Site 2717
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d EGIARNSRLI K KENKCLSESR Site 2725
Dictyostelium.discoideum.CDK10..Probable.cyclin.de KFPTISKSFK N QNKKQNNNFN Site 2480
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d GTSMCPTLQV R GTDAFSCPTQ Site 2887
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa LIYNEMLAYH P EDPQAPYYTD Site 2483
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac KNGVIRGQPS P LGAAVINGSQ Site 2480
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------E E TEAQQPFDDA Site 2480
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri SYEKSLTSVW Q VKELVHRFIT Site 2479
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha TKNGVVKGQP S PSGAAVNSSE Site 2479
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 KLENGCYTLY N NYGEKFKSDK Site 2693
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----DEPEAE  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar HLSSNHPIPA E PRFQPLPSQP Site 2823
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - --------SN  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D RRQEEKYRRK L AQNDQEELPV Site 2852
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U YPASIVPVSM A QRLLPSPSLH Site 2773
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -GELTRQHDK P ARKTLRQSRK Site 2480
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen LSIQPSLNAI L IPPHLRSPAG Site 2480
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - RRVTHEDNGD  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----TPGNLL  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --------AH P SELPIPQRLG Site 2242
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi VNQMAKGTTE E MKYVLGQLVG Site 2480
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen NFTTQELSSN P PLATILIPPH Site 2480
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable LASYEEILPE L VSSSMKALLQ Site 2730
Aspergillus.fumigatus.IME2 LPSPYPTPSP S AKCDGVSFGQ Site 2746
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan RVVPPTATSS G LIMTSDYQRS Site 2510
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- E ETEAQQSYDD Site 2243
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S KDMSRLSMFE L REKMYQFVMD Site 2479
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma SIVHQVPVSM G PRVLPSPTIH Site 2887
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - -------DEP  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ------HALP  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --ESESVTRE L DRKKRTRQPR Site 2480
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - --AEEVDAPA  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - EETEAEPYDQ  
Candida.glabrata.IME2 ELEPRTIPIS L VDQFGSDNLN Site 2739
Homo.sapiens.MAK..Serine.threonine.protein.kinase. LAPLNATASE Y TWNTKTGRGQ Site 2747
Schizosaccharomyces.pombe.IME2 YTNSSGTSTV L SNDSSAISST Site 2775
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ERPGPELFDP S SCPGEWLSEP Site 2743
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ------VHQL  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------D Q MKRKARSEGR Site 2242
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH NSRNPDASPR H LPELFNFSPF Site 2479
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD NAANSNHRLE Q LDAHNSGFSS Site 2509
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. LAPIPDPSPG Y SSLKAMRPHP Site 2765
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act MGVADGPQDG Q ADSASLSASL Site 2764
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----DEPVAD  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a LSGGGEFLLS K QLESIGTPQF Site 2798
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - DEPKAQKYDD  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U TLVHQVPVSV G PSLLTSANVA Site 2887
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ------QLYQ  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --EEPHFDRI I KISIDDGQKF Site 2252
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen NFTTQELSSN P PLATILIPPH Site 2480
Drosophila.melanogaster.GSK3H..Putative.glycogen.s FAAESYAVGE D AEDNLEEDVG Site 2703
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ---------S  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 EPELAQRCHI L DDMSMDSGGS Site 2729
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ---------D  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ------QLYQ  
Cryptococcus.neoformans.IME2 PGPRRRSEWA D PLLRRDKRTT Site 2786
Homo.sapiens.HIPK4..Homeodomain.interacting.protei RPDPELFDPS S CPGEWLSEPD Site 2744
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 KMVSKSYFQK Y TTIIDSDMDS Site 2528
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom TLVHQVPVSV G PSLLTSASVA Site 2887
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A VRMSGPNGQP G NGMNQQDYQV Site 2685
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------P A HHSELPIPQR Site 2242
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --DLEGCKEP E RSGRRHEKAP Site 2479
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. LSSYSSPTLQ S VLGSGTNGRV Site 2515
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a MGVADGPQDG Q ADSASLSASL Site 2764
Mus.musculus.ICK..Serine.threonine.protein.kinase. LAPLAAPPPG Y SSLKAVRPHP Site 2765
Saccharomyces.castelli.IME2 RTFPMNHEQE Q EEVEAGNTSL Site 2744
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----TPGCQL  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----RLWELT  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - -----ARTPD  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - -----TPGPQ  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --------PS D LKGMLSTHLT Site 2243
Homo.sapiens.HIPK2..Homeodomain.interacting.protei SIVHQVPVSM G PRVLPSPTIH Site 2887
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 ISHPWMSKVK D FIGTRESEKE Site 2686
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQMNAE P NAKRVRLSGA Site 2501
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SILLPPHVSK A SATPSSTSST Site 2481
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ------HKLP  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ------HALP  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- E ETEAQQAYDD Site 2243
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNSGHQ L SQQQNVQIQQ Site 2514
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF LGGGYGGVAG S SYGGSYKSKP Site 2696
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ELPPLFNFTA G ELASKPSLRT Site 2480
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------D D WPEPTAYDDS Site 2239
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de TQHNIKYIDS Y VPEYSIARQS Site 2723
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U HPSGIVHQVA V GINPRLLPSP Site 2887
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d PTWPAKSEQQ R VKRGTSPRPP Site 2482
Candida.dubliniensis.IME2 LFAQPWLLKV N EVLGTRESEM Site 2685
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a EERSKNGVKD Q PSDAAVSSKA Site 2480
Aspergillus.niger.IME2 AKCDGVCFGH S DATPCRRLPL Site 2757
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----DEPIAE  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d SKDTKGMEVK Q IKMLKRESKK Site 2746
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----RLWELT  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 TLSLTEVSIS N SSENSSSKPS Site 2741
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - -----EIEVY  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---TKLPDSR H GTGQLRDLPE Site 2481
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - DEPQVQKYDD  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 PTANQVRHHR C NILDDMSVDS Site 2718
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 TDRSHHRGDN V LGDASLGDSF Site 2702
Schizosaccharomyces.japonicus.b.IME2 KSYSGKSNCS F ANSVSNSATK Site 2776
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a LNNSGEFLFN K QLESIGIPQF Site 2798
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - -DTDTYVKAQ  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ---DDETEAE  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de KEMKGMEVKQ I KVLKRESKKT Site 2753
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---SEVEAPP P AITDKQLDER Site 2480
Candida.albicans.IME2 LFAQPWLLKV N EVLGTRESEM Site 2685
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----DEPVAD  
Kluyveromyces.lactis.IME2 DQMAIDDSLD L QEQIPRNLLE Site 2752
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina MGVADGPQDG Q ADSASLSASL Site 2764
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. TKNGVVKSQP S PSGAAVNSSE Site 2479
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - DEPEAEPYDE  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - DEPEAEPYDE  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME QLGRDEPIIV G PGNKLSSGII Site 2516
Neurospora.crassa.IME2 PSASGQNIFF A DHGKEALTPQ Site 2770
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 QNCHAIDEMS I DDASTDSHSQ Site 2759
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi GSQMARGATD E MKYVLGQLVG Site 2480
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ------DDGK  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace FHKKTAYFTA R RLNSKGLVLA Site 2728
Schizosaccharomyces.pombe.b.IME2 CSQPDESNKE G VASCLLLQKS Site 2713
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ---------D  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom HPSGIVHQVP V GINPRLLPSP Site 2887
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---SEAEAPP P KIPDKQLDER Site 2489
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable IKDLVQVIRG R FTSSLELISY Site 2745
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 SSSDIRIETT S FLTPDLDKGN Site 2756
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - ASGITAGAAA  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly SGTVRDLPPL F DFTRHELSIA Site 2481
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk NSRNPDASPR H LPELFNFSPF Site 2479
Species Residue at Site 4874
in 'msaprobs'
muscle

The residue for every species at site 4874 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo EKNLSSVRQV K EIIHQFILEQ Site 2479
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 15:44, October 23rd 2019
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