cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 4873 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4873 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4873 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4873 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 EADEEKNDSH Q HLDSEKPSIF Site 2786
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ---------S  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 PYDIEVDESQ I ACQSPRTDHT Site 2479
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 AAGMAVTGGH A GGGVGGGGGG Site 2775
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g CSRDEGTIER H LPPLFNFNLA Site 2479
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho VRVVPPTTTS G GLIMTSDYQR Site 2509
Schizosaccharomyces.octosporus.b.IME2 GLKIIGINHS L IPRPVRRNHG Site 2756
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei STLVHQVPVS V GPSLLTSASV Site 2886
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar --GDVGKEHE K AARRPAKLTR Site 2479
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - -------DEP  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - -------VHQ  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. VHNSSHWYTT V LIGTQQFSLV Site 2481
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET RTKNGVVKGQ P SPSGAAVNSS Site 2478
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ETIPIQGYRV D EKTKKCSIPF Site 2717
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U RTKNGVVKGQ P SPSGAAVNSS Site 2478
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - EETEAQQPFD  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo FEKNLSSVRQ V KEIIHQFILE Site 2478
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ELNHLPELKG V EGWHPRYLKK Site 2731
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. RAKNGVIRGQ P APLGAAVTDG Site 2478
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d VVHAETKLQN Y GELGPGTTGA Site 2785
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. LSSCSSPALR S VLGTGANGKV Site 2515
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO VVAPPPAHNS S SRQVIPSHPL Site 2885
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl FEKNLSSVRQ V KEIIHQFILE Site 2478
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 AKEHNKPTRK T LRKSRKHHCF Site 2479
Homo.sapiens.HIPK3..Homeodomain.interacting.protei SHPSGIVHQV P VGLNPRLLPS Site 2886
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O FPTWPAKSEQ Q RVKRGTSPRP Site 2481
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d PHNYPLPGQI E SSWHVSALNR Site 2877
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O FPTWPAKSEQ Q RVKRGTSPRP Site 2481
Naegleria.gruberi.LF4 MNDHPPVSSS M TYQTTTTYNN Site 2704
Saccharomyces.bayanus.IME2 HTEKPYHKGS N FLGDASLGDS Site 2701
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ---EETEAPP  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - -----VLAQV  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d PLSQATGGSS N IRQEPTPKGR Site 2856
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a VPSRLPREAP E PRPGRRMFGI Site 2713
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -APEPAETSS S DFKRILNELV Site 2479
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 PSAKCDGVSF G NEDAAPNRRL Site 2753
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se EKDMSRLSMF E LREKMYQFVM Site 2478
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. QLAPLGASAS D YTWSTKTGRG Site 2746
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. KTKNGVVKGQ P SPSGAAVNSS Site 2478
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - -----SRLPN  
Penicillium.marneffei.IME2 SPSAKRDGVS F GDIDNTPVRQ Site 2756
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a APVDGGASPQ F DLDVFISRAL Site 2749
Drosophila.melanogaster.MAK SSLEVNNGSH A DSLAPNAQKE Site 2750
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de NSVVHAETKL Q NYGELGPGTT Site 2783
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin KTKNGVVKGQ P SPSGAAVNSS Site 2478
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a EERSKNGVVK D QPSDAAVSSN Site 2476
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - -----WTTSP  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen FNFSAGELSI Q PSLNAILIPP Site 2479
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ------AEAE A PPPQIYDAQL Site 2241
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a TPIDGGASPQ F DLDVFISRAL Site 2749
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - -------HKL  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - -SQNVFERQE  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- D SLEGEKLSVE Site 2478
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SNSNANVSSN L NSHSASPSTT Site 2514
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ------TPGP  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ASRGSCSSAG  
Debaryomyces.hansenii.IME2 SKNDHDYSWE G FNNLDITNND Site 2716
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - -VTNSSIGGL  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------A H PSELPIPQRP Site 2241
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GNNSSSGGAS G APSAVAAGGA Site 2699
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. VQQVPPRLPP E ARPGRRMFST Site 2716
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d LEGIARNSRL I KKENKCLSES Site 2724
Dictyostelium.discoideum.CDK10..Probable.cyclin.de PKFPTISKSF K NQNKKQNNNF Site 2479
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d RGTSMCPTLQ V RGTDAFSCPT Site 2886
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ELIYNEMLAY H PEDPQAPYYT Site 2482
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac TKNGVIRGQP S PLGAAVINGS Site 2479
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- E ETEAQQPFDD Site 2243
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri DSYEKSLTSV W QVKELVHRFI Site 2478
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha KTKNGVVKGQ P SPSGAAVNSS Site 2478
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 QKLENGCYTL Y NNYGEKFKSD Site 2692
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - -----DEPEA  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar LHLSSNHPIP A EPRFQPLPSQ Site 2822
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ---------S  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D DRRQEEKYRR K LAQNDQEELP Site 2851
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U AYPASIVPVS M AQRLLPSPSL Site 2772
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d --GELTRQHD K PARKTLRQSR Site 2479
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ELSIQPSLNA I LIPPHLRSPA Site 2479
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - -RRVTHEDNG  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - -----TPGNL  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------A H PSELPIPQRL Site 2241
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -VNQMAKGTT E EMKYVLGQLV Site 2479
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen FNFTTQELSS N PPLATILIPP Site 2479
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable HLASYEEILP E LVSSSMKALL Site 2729
Aspergillus.fumigatus.IME2 PLPSPYPTPS P SAKCDGVSFG Site 2745
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan VRVVPPTATS S GLIMTSDYQR Site 2509
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - EETEAQQSYD  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S EKDMSRLSMF E LREKMYQFVM Site 2478
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ASIVHQVPVS M GPRVLPSPTI Site 2886
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - --------DE  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - -------HAL  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---ESESVTR E LDRKKRTRQP Site 2479
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ---AEEVDAP  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - -EETEAEPYD  
Candida.glabrata.IME2 TELEPRTIPI S LVDQFGSDNL Site 2738
Homo.sapiens.MAK..Serine.threonine.protein.kinase. HLAPLNATAS E YTWNTKTGRG Site 2746
Schizosaccharomyces.pombe.IME2 AYTNSSGTST V LSNDSSAISS Site 2774
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom AERPGPELFD P SSCPGEWLSE Site 2742
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - -------VHQ  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- D QMKRKARSEG Site 2241
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH HNSRNPDASP R HLPELFNFSP Site 2478
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD VNAANSNHRL E QLDAHNSGFS Site 2508
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. HLAPIPDPSP G YSSLKAMRPH Site 2764
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act DMGVADGPQD G QADSASLSAS Site 2763
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - -----DEPVA  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a LLSGGGEFLL S KQLESIGTPQ Site 2797
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - -DEPKAQKYD  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U STLVHQVPVS V GPSLLTSANV Site 2886
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -------QLY  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---EEPHFDR I IKISIDDGQK Site 2251
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen FNFTTQELSS N PPLATILIPP Site 2479
Drosophila.melanogaster.GSK3H..Putative.glycogen.s HFAAESYAVG E DAEDNLEEDV Site 2702
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 PEPELAQRCH I LDDMSMDSGG Site 2728
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -------QLY  
Cryptococcus.neoformans.IME2 DPGPRRRSEW A DPLLRRDKRT Site 2785
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ERPDPELFDP S SCPGEWLSEP Site 2743
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 YKMVSKSYFQ K YTTIIDSDMD Site 2527
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom STLVHQVPVS V GPSLLTSASV Site 2886
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A RVRMSGPNGQ P GNGMNQQDYQ Site 2684
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- P AHHSELPIPQ Site 2241
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---DLEGCKE P ERSGRRHEKA Site 2478
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. RLSSYSSPTL Q SVLGSGTNGR Site 2514
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a DMGVADGPQD G QADSASLSAS Site 2763
Mus.musculus.ICK..Serine.threonine.protein.kinase. QLAPLAAPPP G YSSLKAVRPH Site 2764
Saccharomyces.castelli.IME2 RRTFPMNHEQ E QEEVEAGNTS Site 2743
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - -----TPGCQ  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - -----RLWEL  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ------ARTP  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ------TPGP  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------P S DLKGMLSTHL Site 2242
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ASIVHQVPVS M GPRVLPSPTI Site 2886
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 LISHPWMSKV K DFIGTRESEK Site 2685
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQMNA E PNAKRVRLSG Site 2500
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ESILLPPHVS K ASATPSSTSS Site 2480
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - -------HKL  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - -------HAL  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - EETEAQQAYD  
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNSGH Q LSQQQNVQIQ Site 2513
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF KLGGGYGGVA G SSYGGSYKSK Site 2695
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA RELPPLFNFT A GELASKPSLR Site 2479
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- D DWPEPTAYDD Site 2238
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de KTQHNIKYID S YVPEYSIARQ Site 2722
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U SHPSGIVHQV A VGINPRLLPS Site 2886
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d FPTWPAKSEQ Q RVKRGTSPRP Site 2481
Candida.dubliniensis.IME2 KLFAQPWLLK V NEVLGTRESE Site 2684
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a WEERSKNGVK D QPSDAAVSSK Site 2479
Aspergillus.niger.IME2 SAKCDGVCFG H SDATPCRRLP Site 2756
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - -----DEPIA  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d QSKDTKGMEV K QIKMLKRESK Site 2745
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - -----RLWEL  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 PTLSLTEVSI S NSSENSSSKP Site 2740
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ------EIEV  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ----TKLPDS R HGTGQLRDLP Site 2480
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - -DEPQVQKYD  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 QPTANQVRHH R CNILDDMSVD Site 2717
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 HTDRSHHRGD N VLGDASLGDS Site 2701
Schizosaccharomyces.japonicus.b.IME2 RKSYSGKSNC S FANSVSNSAT Site 2775
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a FLNNSGEFLF N KQLESIGIPQ Site 2797
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - --DTDTYVKA  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ----DDETEA  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de AKEMKGMEVK Q IKVLKRESKK Site 2752
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ----SEVEAP P PAITDKQLDE Site 2243
Candida.albicans.IME2 KLFAQPWLLK V NEVLGTRESE Site 2684
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - -----DEPVA  
Kluyveromyces.lactis.IME2 SDQMAIDDSL D LQEQIPRNLL Site 2751
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina DMGVADGPQD G QADSASLSAS Site 2763
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. KTKNGVVKSQ P SPSGAAVNSS Site 2478
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - -DEPEAEPYD  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - -DEPEAEPYD  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME KQLGRDEPII V GPGNKLSSGI Site 2515
Neurospora.crassa.IME2 SPSASGQNIF F ADHGKEALTP Site 2769
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 HQNCHAIDEM S IDDASTDSHS Site 2758
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -GSQMARGAT D EMKYVLGQLV Site 2479
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - -------DDG  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace VFHKKTAYFT A RRLNSKGLVL Site 2727
Schizosaccharomyces.pombe.b.IME2 SCSQPDESNK E GVASCLLLQK Site 2712
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom SHPSGIVHQV P VGINPRLLPS Site 2886
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ----SEAEAP P PKIPDKQLDE Site 2243
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable GIKDLVQVIR G RFTSSLELIS Site 2744
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 GSSSDIRIET T SFLTPDLDKG Site 2755
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - -ASGITAGAA  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly NSGTVRDLPP L FDFTRHELSI Site 2480
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk HNSRNPDASP R HLPELFNFSP Site 2478
Species Residue at Site 4873
in 'msaprobs'
muscle

The residue for every species at site 4873 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo FEKNLSSVRQ V KEIIHQFILE Site 2478
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:19, October 16th 2019
Questions/Comments? help@phylobot.com