cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4872 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4872 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4872 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4872 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 EEADEEKNDS H QHLDSEKPSI Site 2785
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 GPYDIEVDES Q IACQSPRTDH Site 2478
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 GAAGMAVTGG H AGGGVGGGGG Site 2774
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g HCSRDEGTIE R HLPPLFNFNL Site 2478
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho KVRVVPPTTT S GGLIMTSDYQ Site 2508
Schizosaccharomyces.octosporus.b.IME2 QGLKIIGINH S LIPRPVRRNH Site 2755
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PSTLVHQVPV S VGPSLLTSAS Site 2885
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---GDVGKEH E KAARRPAKLT Site 2478
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - --------DE  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - --------VH  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LVHNSSHWYT T VLIGTQQFSL Site 2480
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ERTKNGVVKG Q PSPSGAAVNS Site 2477
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 TETIPIQGYR V DEKTKKCSIP Site 2716
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ERTKNGVVKG Q PSPSGAAVNS Site 2477
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - -EETEAQQPF  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo TFEKNLSSVR Q VKEIIHQFIL Site 2477
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar PELNHLPELK G VEGWHPRYLK Site 2730
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ERAKNGVIRG Q PAPLGAAVTD Site 2477
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SVVHAETKLQ N YGELGPGTTG Site 2784
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. KLSSCSSPAL R SVLGTGANGK Site 2514
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO AVVAPPPAHN S SSRQVIPSHP Site 2884
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl TFEKNLSSVR Q VKEIIHQFIL Site 2477
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 LAKEHNKPTR K TLRKSRKHHC Site 2478
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ISHPSGIVHQ V PVGLNPRLLP Site 2885
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O MFPTWPAKSE Q QRVKRGTSPR Site 2480
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d KPHNYPLPGQ I ESSWHVSALN Site 2876
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O MFPTWPAKSE Q QRVKRGTSPR Site 2480
Naegleria.gruberi.LF4 YMNDHPPVSS S MTYQTTTTYN Site 2703
Saccharomyces.bayanus.IME2 THTEKPYHKG S NFLGDASLGD Site 2700
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----EETEAP  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ------VLAQ  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d HPLSQATGGS S NIRQEPTPKG Site 2855
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a RVPSRLPREA P EPRPGRRMFG Site 2712
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific --APEPAETS S SDFKRILNEL Site 2478
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 SPSAKCDGVS F GNEDAAPNRR Site 2752
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se WEKDMSRLSM F ELREKMYQFV Site 2477
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. IQLAPLGASA S DYTWSTKTGR Site 2745
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. EKTKNGVVKG Q PSPSGAAVNS Site 2477
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ------SRLP  
Penicillium.marneffei.IME2 PSPSAKRDGV S FGDIDNTPVR Site 2755
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a PAPVDGGASP Q FDLDVFISRA Site 2748
Drosophila.melanogaster.MAK QSSLEVNNGS H ADSLAPNAQK Site 2749
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de SNSVVHAETK L QNYGELGPGT Site 2782
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin EKTKNGVVKG Q PSPSGAAVNS Site 2477
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a WEERSKNGVV K DQPSDAAVSS Site 2475
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ------WTTS  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen LFNFSAGELS I QPSLNAILIP Site 2478
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -------AEA E APPPQIYDAQ Site 2240
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a PTPIDGGASP Q FDLDVFISRA Site 2748
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - --------HK  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - --SQNVFERQ  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - DSLEGEKLSV  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSNSNANVSS N LNSHSASPST Site 2513
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - -------TPG  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - -ASRGSCSSA  
Debaryomyces.hansenii.IME2 YSKNDHDYSW E GFNNLDITNN Site 2715
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - --VTNSSIGG  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- A HPSELPIPQR Site 2240
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg SGNNSSSGGA S GAPSAVAAGG Site 2698
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. SVQQVPPRLP P EARPGRRMFS Site 2715
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ALEGIARNSR L IKKENKCLSE Site 2723
Dictyostelium.discoideum.CDK10..Probable.cyclin.de MPKFPTISKS F KNQNKKQNNN Site 2478
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d VRGTSMCPTL Q VRGTDAFSCP Site 2885
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa KELIYNEMLA Y HPEDPQAPYY Site 2481
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac RTKNGVIRGQ P SPLGAAVING Site 2478
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - EETEAQQPFD  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri DDSYEKSLTS V WQVKELVHRF Site 2477
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha EKTKNGVVKG Q PSPSGAAVNS Site 2477
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 QQKLENGCYT L YNNYGEKFKS Site 2691
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ------DEPE  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar LLHLSSNHPI P AEPRFQPLPS Site 2821
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D NDRRQEEKYR R KLAQNDQEEL Site 2850
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U AAYPASIVPV S MAQRLLPSPS Site 2771
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---GELTRQH D KPARKTLRQS Site 2478
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen GELSIQPSLN A ILIPPHLRSP Site 2478
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - --RRVTHEDN  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ------TPGN  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- A HPSELPIPQR Site 2240
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi --VNQMAKGT T EEMKYVLGQL Site 2478
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen LFNFTTQELS S NPPLATILIP Site 2478
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable VHLASYEEIL P ELVSSSMKAL Site 2728
Aspergillus.fumigatus.IME2 RPLPSPYPTP S PSAKCDGVSF Site 2744
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan KVRVVPPTAT S SGLIMTSDYQ Site 2508
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - -EETEAQQSY  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S WEKDMSRLSM F ELREKMYQFV Site 2477
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PASIVHQVPV S MGPRVLPSPT Site 2885
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ---------D  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - --------HA  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ----ESESVT R ELDRKKRTRQ Site 2478
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----AEEVDA  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - --EETEAEPY  
Candida.glabrata.IME2 MTELEPRTIP I SLVDQFGSDN Site 2737
Homo.sapiens.MAK..Serine.threonine.protein.kinase. IHLAPLNATA S EYTWNTKTGR Site 2745
Schizosaccharomyces.pombe.IME2 LAYTNSSGTS T VLSNDSSAIS Site 2773
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom DAERPGPELF D PSSCPGEWLS Site 2741
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - --------VH  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - DQMKRKARSE  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH LHNSRNPDAS P RHLPELFNFS Site 2477
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD KVNAANSNHR L EQLDAHNSGF Site 2507
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. VHLAPIPDPS P GYSSLKAMRP Site 2763
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act FDMGVADGPQ D GQADSASLSA Site 2762
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ------DEPV  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a GLLSGGGEFL L SKQLESIGTP Site 2796
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - --DEPKAQKY  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PSTLVHQVPV S VGPSLLTSAN Site 2885
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --------QL  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ----EEPHFD R IIKISIDDGQ Site 2250
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen LFNFTTQELS S NPPLATILIP Site 2478
Drosophila.melanogaster.GSK3H..Putative.glycogen.s NHFAAESYAV G EDAEDNLEED Site 2701
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 YPEPELAQRC H ILDDMSMDSG Site 2727
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --------QL  
Cryptococcus.neoformans.IME2 SDPGPRRRSE W ADPLLRRDKR Site 2784
Homo.sapiens.HIPK4..Homeodomain.interacting.protei AERPDPELFD P SSCPGEWLSE Site 2742
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 DYKMVSKSYF Q KYTTIIDSDM Site 2526
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PSTLVHQVPV S VGPSLLTSAS Site 2885
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A KRVRMSGPNG Q PGNGMNQQDY Site 2683
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - PAHHSELPIP  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ----DLEGCK E PERSGRRHEK Site 2477
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. VRLSSYSSPT L QSVLGSGTNG Site 2513
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a FDMGVADGPQ D GQADSASLSA Site 2762
Mus.musculus.ICK..Serine.threonine.protein.kinase. VQLAPLAAPP P GYSSLKAVRP Site 2763
Saccharomyces.castelli.IME2 TRRTFPMNHE Q EQEEVEAGNT Site 2742
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ------TPGC  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ------RLWE  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - -------ART  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - -------TPG  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- P SDLKGMLSTH Site 2241
Homo.sapiens.HIPK2..Homeodomain.interacting.protei PASIVHQVPV S MGPRVLPSPT Site 2885
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 KLISHPWMSK V KDFIGTRESE Site 2684
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQMN A EPNAKRVRLS Site 2499
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G LESILLPPHV S KASATPSSTS Site 2479
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - --------HK  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - --------HA  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - -EETEAQQAY  
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNSG H QLSQQQNVQI Site 2512
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF VKLGGGYGGV A GSSYGGSYKS Site 2694
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA GRELPPLFNF T AGELASKPSL Site 2478
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - DDWPEPTAYD  
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de NKTQHNIKYI D SYVPEYSIAR Site 2721
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U LSHPSGIVHQ V AVGINPRLLP Site 2885
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d MFPTWPAKSE Q QRVKRGTSPR Site 2480
Candida.dubliniensis.IME2 YKLFAQPWLL K VNEVLGTRES Site 2683
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DWEERSKNGV K DQPSDAAVSS Site 2478
Aspergillus.niger.IME2 PSAKCDGVCF G HSDATPCRRL Site 2755
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ------DEPI  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d IQSKDTKGME V KQIKMLKRES Site 2744
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ------RLWE  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 PPTLSLTEVS I SNSSENSSSK Site 2739
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - -------EIE  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -----TKLPD S RHGTGQLRDL Site 2479
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - --DEPQVQKY  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 DQPTANQVRH H RCNILDDMSV Site 2716
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 THTDRSHHRG D NVLGDASLGD Site 2700
Schizosaccharomyces.japonicus.b.IME2 VRKSYSGKSN C SFANSVSNSA Site 2774
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a GFLNNSGEFL F NKQLESIGIP Site 2796
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ---DTDTYVK  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - -----DDETE  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de QAKEMKGMEV K QIKVLKRESK Site 2751
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -----SEVEA P PPAITDKQLD Site 2242
Candida.albicans.IME2 YKLFAQPWLL K VNEVLGTRES Site 2683
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ------DEPV  
Kluyveromyces.lactis.IME2 LSDQMAIDDS L DLQEQIPRNL Site 2750
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina FDMGVADGPQ D GQADSASLSA Site 2762
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. EKTKNGVVKS Q PSPSGAAVNS Site 2477
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - --DEPEAEPY  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - --DEPEAEPY  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME FKQLGRDEPI I VGPGNKLSSG Site 2514
Neurospora.crassa.IME2 PSPSASGQNI F FADHGKEALT Site 2768
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 THQNCHAIDE M SIDDASTDSH Site 2757
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi --GSQMARGA T DEMKYVLGQL Site 2478
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - --------DD  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace PVFHKKTAYF T ARRLNSKGLV Site 2726
Schizosaccharomyces.pombe.b.IME2 PSCSQPDESN K EGVASCLLLQ Site 2711
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ISHPSGIVHQ V PVGINPRLLP Site 2885
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -----SEAEA P PPKIPDKQLD Site 2242
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable GGIKDLVQVI R GRFTSSLELI Site 2743
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 GGSSSDIRIE T TSFLTPDLDK Site 2754
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - --ASGITAGA  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly HNSGTVRDLP P LFDFTRHELS Site 2479
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk LHNSRNPDAS P RHLPELFNFS Site 2477
Species Residue at Site 4872
in 'msaprobs'
muscle

The residue for every species at site 4872 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo TFEKNLSSVR Q VKEIIHQFIL Site 2477
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 16:35, October 23rd 2019
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