cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4870 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4870 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4870 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4870 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 KGEEADEEKN D SHQHLDSEKP Site 2783
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 NLGPYDIEVD E SQIACQSPRT Site 2476
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 VAGAAGMAVT G GHAGGGVGGG Site 2772
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g MYHCSRDEGT I ERHLPPLFNF Site 2476
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho LKKVRVVPPT T TSGGLIMTSD Site 2506
Schizosaccharomyces.octosporus.b.IME2 MGQGLKIIGI N HSLIPRPVRR Site 2753
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei THPSTLVHQV P VSVGPSLLTS Site 2883
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -----GDVGK E HEKAARRPAK Site 2476
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ----------  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. FSLVHNSSHW Y TTVLIGTQQF Site 2478
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET FEERTKNGVV K GQPSPSGAAV Site 2475
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 MGTETIPIQG Y RVDEKTKKCS Site 2714
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U FEERTKNGVV K GQPSPSGAAV Site 2475
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ---EETEAQQ  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo DDTFEKNLSS V RQVKEIIHQF Site 2475
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar HLPELNHLPE L KGVEGWHPRY Site 2728
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. WEERAKNGVI R GQPAPLGAAV Site 2475
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SNSVVHAETK L QNYGELGPGT Site 2782
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. MTKLSSCSSP A LRSVLGTGAN Site 2512
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO NRAVVAPPPA H NSSSRQVIPS Site 2882
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl DDTFEKNLSS V RQVKEIIHQF Site 2475
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 EDLAKEHNKP T RKTLRKSRKH Site 2476
Homo.sapiens.HIPK3..Homeodomain.interacting.protei YNISHPSGIV H QVPVGLNPRL Site 2883
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O PSMFPTWPAK S EQQRVKRGTS Site 2478
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d SRKPHNYPLP G QIESSWHVSA Site 2874
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O PSMFPTWPAK S EQQRVKRGTS Site 2478
Naegleria.gruberi.LF4 SPYMNDHPPV S SSMTYQTTTT Site 2701
Saccharomyces.bayanus.IME2 NYTHTEKPYH K GSNFLGDASL Site 2698
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ------EETE  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - --------VL  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d RIHPLSQATG G SSNIRQEPTP Site 2853
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ARRVPSRLPR E APEPRPGRRM Site 2710
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ----APEPAE T SSSDFKRILN Site 2476
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 TPSPSAKCDG V SFGNEDAAPN Site 2750
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se PKWEKDMSRL S MFELREKMYQ Site 2475
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. QRIQLAPLGA S ASDYTWSTKT Site 2743
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. FEEKTKNGVV K GQPSPSGAAV Site 2475
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - --------SR  
Penicillium.marneffei.IME2 PTPSPSAKRD G VSFGDIDNTP Site 2753
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a GRPAPVDGGA S PQFDLDVFIS Site 2746
Drosophila.melanogaster.MAK ATQSSLEVNN G SHADSLAPNA Site 2747
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de GNSNSVVHAE T KLQNYGELGP Site 2780
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SEEKTKNGVV K GQPSPSGAAV Site 2475
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a MDWEERSKNG V VKDQPSDAAV Site 2473
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - --------WT  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen PPLFNFSAGE L SIQPSLNAIL Site 2476
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------A E AEAPPPQIYD Site 2238
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a GHPTPIDGGA S PQFDLDVFIS Site 2746
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----SQNVFE  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - --DSLEGEKL  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSSNSNANV S SNLNSHSASP Site 2511
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ---------T  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ---ASRGSCS  
Debaryomyces.hansenii.IME2 NTYSKNDHDY S WEGFNNLDIT Site 2713
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - ----VTNSSI  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - -AHPSELPIP  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg PGSGNNSSSG G ASGAPSAVAA Site 2696
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. VASVQQVPPR L PPEARPGRRM Site 2713
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d LRALEGIARN S RLIKKENKCL Site 2721
Dictyostelium.discoideum.CDK10..Probable.cyclin.de EMMPKFPTIS K SFKNQNKKQN Site 2476
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d LQVRGTSMCP T LQVRGTDAFS Site 2883
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa LLKELIYNEM L AYHPEDPQAP Site 2479
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac EERTKNGVIR G QPSPLGAAVI Site 2476
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - --EETEAQQP  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri RFDDSYEKSL T SVWQVKELVH Site 2475
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SEEKTKNGVV K GQPSPSGAAV Site 2475
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 SSQQKLENGC Y TLYNNYGEKF Site 2689
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - --------DE  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar RKLLHLSSNH P IPAEPRFQPL Site 2819
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D WLNDRRQEEK Y RRKLAQNDQE Site 2848
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U RHAAYPASIV P VSMAQRLLPS Site 2769
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -----GELTR Q HDKPARKTLR Site 2476
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen SPGELSIQPS L NAILIPPHLR Site 2476
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----RRVTHE  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - --------TP  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - -AHPSELPIP  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ----VNQMAK G TTEEMKYVLG Site 2476
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen PALFNFTTQE L SSNPPLATIL Site 2476
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable LLVHLASYEE I LPELVSSSMK Site 2726
Aspergillus.fumigatus.IME2 GSRPLPSPYP T PSPSAKCDGV Site 2742
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan LKKVRVVPPT A TSSGLIMTSD Site 2506
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ---EETEAQQ  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S PKWEKDMSRL S MFELREKMYQ Site 2475
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma AYPASIVHQV P VSMGPRVLPS Site 2883
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ------ESES V TRELDRKKRT Site 2476
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ------AEEV  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----EETEAE  
Candida.glabrata.IME2 NQMTELEPRT I PISLVDQFGS Site 2735
Homo.sapiens.MAK..Serine.threonine.protein.kinase. QRIHLAPLNA T ASEYTWNTKT Site 2743
Schizosaccharomyces.pombe.IME2 KTLAYTNSSG T STVLSNDSSA Site 2771
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom PMDAERPGPE L FDPSSCPGEW Site 2739
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - --DQMKRKAR  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH TKLHNSRNPD A SPRHLPELFN Site 2475
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD HQKVNAANSN H RLEQLDAHNS Site 2505
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. QRVHLAPIPD P SPGYSSLKAM Site 2761
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act QSFDMGVADG P QDGQADSASL Site 2760
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - --------DE  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a EAGLLSGGGE F LLSKQLESIG Site 2794
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ----DEPKAQ  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U THPSTLVHQV P VSVGPSLLTS Site 2883
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ------EEPH F DRIIKISIDD Site 2243
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen PALFNFTTQE L SSNPPLATIL Site 2476
Drosophila.melanogaster.GSK3H..Putative.glycogen.s EQNHFAAESY A VGEDAEDNLE Site 2699
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 IHYPEPELAQ R CHILDDMSMD Site 2725
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 VDSDPGPRRR S EWADPLLRRD Site 2782
Homo.sapiens.HIPK4..Homeodomain.interacting.protei MEAERPDPEL F DPSSCPGEWL Site 2740
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 SCDYKMVSKS Y FQKYTTIIDS Site 2524
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom THPSTLVHQV P VSVGPSLLTS Site 2883
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A AAKRVRMSGP N GQPGNGMNQQ Site 2681
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - --PAHHSELP  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ------DLEG C KEPERSGRRH Site 2475
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. GVVRLSSYSS P TLQSVLGSGT Site 2511
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a QSFDMGVADG P QDGQADSASL Site 2760
Mus.musculus.ICK..Serine.threonine.protein.kinase. QRVQLAPLAA P PPGYSSLKAV Site 2761
Saccharomyces.castelli.IME2 PFTRRTFPMN H EQEQEEVEAG Site 2740
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - --------TP  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --------RL  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ---------A  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ---------T  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - -PSDLKGMLS  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei AYPASIVHQV P VSMGPRVLPS Site 2883
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 GYKLISHPWM S KVKDFIGTRE Site 2682
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ M NAEPNAKRVR Site 2497
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G PSLESILLPP H VSKASATPSS Site 2477
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ---EETEAQQ  
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNNN S GHQLSQQQNV Site 2510
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF EPVKLGGGYG G VAGSSYGGSY Site 2692
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA PNGRELPPLF N FTAGELASKP Site 2476
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - --DDWPEPTA  
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de DTNKTQHNIK Y IDSYVPEYSI Site 2719
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U YSLSHPSGIV H QVAVGINPRL Site 2883
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d PSMFPTWPAK S EQQRVKRGTS Site 2478
Candida.dubliniensis.IME2 ESYKLFAQPW L LKVNEVLGTR Site 2681
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a VMDWEERSKN G VKDQPSDAAV Site 2476
Aspergillus.niger.IME2 PSPSAKCDGV C FGHSDATPCR Site 2753
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - --------DE  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d VTIQSKDTKG M EVKQIKMLKR Site 2742
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --------RL  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 PRPPTLSLTE V SISNSSENSS Site 2737
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ---------E  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -------TKL P DSRHGTGQLR Site 2477
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ----DEPQVQ  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 HYDQPTANQV R HHRCNILDDM Site 2714
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 NYTHTDRSHH R GDNVLGDASL Site 2698
Schizosaccharomyces.japonicus.b.IME2 RLVRKSYSGK S NCSFANSVSN Site 2772
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a EEGFLNNSGE F LFNKQLESIG Site 2794
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - -----DTDTY  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - -------DDE  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de TVQAKEMKGM E VKQIKVLKRE Site 2749
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -------SEV E APPPAITDKQ Site 2240
Candida.albicans.IME2 ESYKLFAQPW L LKVNEVLGTR Site 2681
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - --------DE  
Kluyveromyces.lactis.IME2 PTLSDQMAID D SLDLQEQIPR Site 2748
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina QSFDMGVADG P QDGQADSASL Site 2760
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SEEKTKNGVV K SQPSPSGAAV Site 2475
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----DEPEAE  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----DEPEAE  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SQFKQLGRDE P IIVGPGNKLS Site 2512
Neurospora.crassa.IME2 PTPSPSASGQ N IFFADHGKEA Site 2766
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 ESTHQNCHAI D EMSIDDASTD Site 2755
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ----GSQMAR G ATDEMKYVLG Site 2476
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace FLPVFHKKTA Y FTARRLNSKG Site 2724
Schizosaccharomyces.pombe.b.IME2 IVPSCSQPDE S NKEGVASCLL Site 2709
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom YNISHPSGIV H QVPVGINPRL Site 2883
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -------SEA E APPPKIPDKQ Site 2240
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ESGGIKDLVQ V IRGRFTSSLE Site 2741
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 QFGGSSSDIR I ETTSFLTPDL Site 2752
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - ----ASGITA  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly SRHNSGTVRD L PPLFDFTRHE Site 2477
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk TKLHNSRNPD A SPRHLPELFN Site 2475
Species Residue at Site 4870
in 'msaprobs'
muscle

The residue for every species at site 4870 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo DDTFEKNLSS V RQVKEIIHQF Site 2475
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 05:28, December 6th 2019
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