cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4868 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4868 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4868 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4868 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 NFKGEEADEE K NDSHQHLDSE Site 2781
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 KENLGPYDIE V DESQIACQSP Site 2474
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 --VAGAAGMA V TGGHAGGGVG Site 2770
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --MYHCSRDE G TIERHLPPLF Site 2474
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho PPLKKVRVVP P TTTSGGLIMT Site 2504
Schizosaccharomyces.octosporus.b.IME2 DAMGQGLKII G INHSLIPRPV Site 2751
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei YTTHPSTLVH Q VPVSVGPSLL Site 2881
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -------GDV G KEHEKAARRP Site 2474
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ----------  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. --FSLVHNSS H WYTTVLIGTQ Site 2476
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --FEERTKNG V VKGQPSPSGA Site 2473
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --MGTETIPI Q GYRVDEKTKK Site 2712
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --FEERTKNG V VKGQPSPSGA Site 2473
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - -----EETEA  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --DDTFEKNL S SVRQVKEIIH Site 2473
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --HLPELNHL P ELKGVEGWHP Site 2726
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --WEERAKNG V IRGQPAPLGA Site 2473
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --SNSVVHAE T KLQNYGELGP Site 2780
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. --MTKLSSCS S PALRSVLGTG Site 2510
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO YANRAVVAPP P AHNSSSRQVI Site 2880
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --DDTFEKNL S SVRQVKEIIH Site 2473
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --EDLAKEHN K PTRKTLRKSR Site 2474
Homo.sapiens.HIPK3..Homeodomain.interacting.protei PTYNISHPSG I VHQVPVGLNP Site 2881
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --PSMFPTWP A KSEQQRVKRG Site 2476
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --SRKPHNYP L PGQIESSWHV Site 2872
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --PSMFPTWP A KSEQQRVKRG Site 2476
Naegleria.gruberi.LF4 --SPYMNDHP P VSSSMTYQTT Site 2699
Saccharomyces.bayanus.IME2 DSNYTHTEKP Y HKGSNFLGDA Site 2696
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - --------EE  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --RIHPLSQA T GGSSNIRQEP Site 2851
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --ARRVPSRL P REAPEPRPGR Site 2708
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ------APEP A ETSSSDFKRI Site 2474
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 YPTPSPSAKC D GVSFGNEDAA Site 2748
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --PKWEKDMS R LSMFELREKM Site 2473
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --QRIQLAPL G ASASDYTWST Site 2741
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --FEEKTKNG V VKGQPSPSGA Site 2473
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ----------  
Penicillium.marneffei.IME2 PYPTPSPSAK R DGVSFGDIDN Site 2751
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a PPGRPAPVDG G ASPQFDLDVF Site 2744
Drosophila.melanogaster.MAK --ATQSSLEV N NGSHADSLAP Site 2745
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --GNSNSVVH A ETKLQNYGEL Site 2778
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --SEEKTKNG V VKGQPSPSGA Site 2473
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --MDWEERSK N GVVKDQPSDA Site 2471
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --PPLFNFSA G ELSIQPSLNA Site 2474
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - AEAEAPPPQI  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a PPGHPTPIDG G ASPQFDLDVF Site 2744
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ------SQNV  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ----DSLEGE  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --SSSSNSNA N VSSNLNSHSA Site 2509
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - -----ASRGS  
Debaryomyces.hansenii.IME2 SENTYSKNDH D YSWEGFNNLD Site 2711
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - ------VTNS  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ---AHPSELP  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --PGSGNNSS S GGASGAPSAV Site 2694
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --VASVQQVP P RLPPEARPGR Site 2711
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d --LRALEGIA R NSRLIKKENK Site 2719
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --EMMPKFPT I SKSFKNQNKK Site 2474
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --LQVRGTSM C PTLQVRGTDA Site 2881
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa --LLKELIYN E MLAYHPEDPQ Site 2477
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --EERTKNGV I RGQPSPLGAA Site 2474
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ----EETEAQ  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --RFDDSYEK S LTSVWQVKEL Site 2473
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --SEEKTKNG V VKGQPSPSGA Site 2473
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 DCSSQQKLEN G CYTLYNNYGE Site 2687
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --RKLLHLSS N HPIPAEPRFQ Site 2817
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D LFWLNDRRQE E KYRRKLAQND Site 2846
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U SARHAAYPAS I VPVSMAQRLL Site 2767
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -------GEL T RQHDKPARKT Site 2474
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --SPGELSIQ P SLNAILIPPH Site 2474
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ------RRVT  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ---AHPSELP  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ------VNQM A KGTTEEMKYV Site 2474
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --PALFNFTT Q ELSSNPPLAT Site 2474
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable GMLLVHLASY E EILPELVSSS Site 2724
Aspergillus.fumigatus.IME2 NDGSRPLPSP Y PTPSPSAKCD Site 2740
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan PPLKKVRVVP P TATSSGLIMT Site 2504
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - -----EETEA  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --PKWEKDMS R LSMFELREKM Site 2473
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma HTAYPASIVH Q VPVSMGPRVL Site 2881
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --------ES E SVTRELDRKK Site 2243
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - --------AE  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ------EETE  
Candida.glabrata.IME2 KSNQMTELEP R TIPISLVDQF Site 2733
Homo.sapiens.MAK..Serine.threonine.protein.kinase. --QRIHLAPL N ATASEYTWNT Site 2741
Schizosaccharomyces.pombe.IME2 LRKTLAYTNS S GTSTVLSNDS Site 2769
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom DRPMDAERPG P ELFDPSSCPG Site 2737
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----DQMKRK  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --TKLHNSRN P DASPRHLPEL Site 2473
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --HQKVNAAN S NHRLEQLDAH Site 2503
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --QRVHLAPI P DPSPGYSSLK Site 2759
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --QSFDMGVA D GPQDGQADSA Site 2758
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----------  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a GREAGLLSGG G EFLLSKQLES Site 2792
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ------DEPK  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U FATHPSTLVH Q VPVSVGPSLL Site 2881
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --------EE P HFDRIIKISI Site 2241
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --PALFNFTT Q ELSSNPPLAT Site 2474
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --EQNHFAAE S YAVGEDAEDN Site 2697
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 NYIHYPEPEL A QRCHILDDMS Site 2723
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 GTVDSDPGPR R RSEWADPLLR Site 2780
Homo.sapiens.HIPK4..Homeodomain.interacting.protei MTMEAERPDP E LFDPSSCPGE Site 2738
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 EVSCDYKMVS K SYFQKYTTII Site 2522
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom YTTHPSTLVH Q VPVSVGPSLL Site 2881
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A HSAAKRVRMS G PNGQPGNGMN Site 2679
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----PAHHSE  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --------DL E GCKEPERSGR Site 2243
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --GVVRLSSY S SPTLQSVLGS Site 2509
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --QSFDMGVA D GPQDGQADSA Site 2758
Mus.musculus.ICK..Serine.threonine.protein.kinase. --QRVQLAPL A APPPGYSSLK Site 2759
Saccharomyces.castelli.IME2 NNPFTRRTFP M NHEQEQEEVE Site 2738
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ---PSDLKGM  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei HTAYPASIVH Q VPVSMGPRVL Site 2881
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 IDGYKLISHP W MSKVKDFIGT Site 2680
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QMNAEPNAKR Site 2495
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --PSLESILL P PHVSKASATP Site 2475
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - -----EETEA  
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNNN N NSGHQLSQQQ Site 2508
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --EPVKLGGG Y GGVAGSSYGG Site 2690
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --PNGRELPP L FNFTAGELAS Site 2474
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----DDWPEP  
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de --DTNKTQHN I KYIDSYVPEY Site 2717
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U PTYSLSHPSG I VHQVAVGINP Site 2881
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --PSMFPTWP A KSEQQRVKRG Site 2476
Candida.dubliniensis.IME2 GNESYKLFAQ P WLLKVNEVLG Site 2679
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --VMDWEERS K NGVKDQPSDA Site 2474
Aspergillus.niger.IME2 PTPSPSAKCD G VCFGHSDATP Site 2751
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d --VTIQSKDT K GMEVKQIKML Site 2740
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 PLPRPPTLSL T EVSISNSSEN Site 2735
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------T K LPDSRHGTGQ Site 2475
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ------DEPQ  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 YIHYDQPTAN Q VRHHRCNILD Site 2712
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 NSNYTHTDRS H HRGDNVLGDA Site 2696
Schizosaccharomyces.japonicus.b.IME2 IPRLVRKSYS G KSNCSFANSV Site 2770
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a GHEEGFLNNS G EFLFNKQLES Site 2792
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - -------DTD  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ---------D  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de --TVQAKEMK G MEVKQIKVLK Site 2747
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------S E VEAPPPAITD Site 2238
Candida.albicans.IME2 GNESYKLFAQ P WLLKVNEVLG Site 2679
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 AGPTLSDQMA I DDSLDLQEQI Site 2746
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --QSFDMGVA D GPQDGQADSA Site 2758
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --SEEKTKNG V VKSQPSPSGA Site 2473
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ------DEPE  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ------DEPE  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME --SQFKQLGR D EPIIVGPGNK Site 2510
Neurospora.crassa.IME2 PYPTPSPSAS G QNIFFADHGK Site 2764
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 IHESTHQNCH A IDEMSIDDAS Site 2753
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ------GSQM A RGATDEMKYV Site 2474
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --FLPVFHKK T AYFTARRLNS Site 2722
Schizosaccharomyces.pombe.b.IME2 DSIVPSCSQP D ESNKEGVASC Site 2707
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom PTYNISHPSG I VHQVPVGINP Site 2881
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------S E AEAPPPKIPD Site 2238
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable EMESGGIKDL V QVIRGRFTSS Site 2739
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 VDQFGGSSSD I RIETTSFLTP Site 2750
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - ------ASGI  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --SRHNSGTV R DLPPLFDFTR Site 2475
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --TKLHNSRN P DASPRHLPEL Site 2473
Species Residue at Site 4868
in 'msaprobs'
muscle

The residue for every species at site 4868 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --DDTFEKNL S SVRQVKEIIH Site 2473
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 15:47, October 23rd 2019
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