cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4863 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4863 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4863 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4863 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 KRSLKNFKGE E ADEEKNDSHQ Site 2776
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 DSGNNKENLG P YDIEVDESQI Site 2469
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 -------VAG A AGMAVTGGHA Site 2765
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -------MYH C SRDEGTIERH Site 2469
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho SHTQGPPLKK V RVVPPTTTSG Site 2499
Schizosaccharomyces.octosporus.b.IME2 VGTPKDAMGQ G LKIIGINHSL Site 2746
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei RHAAAYTTHP S TLVHQVPVSV Site 2876
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - -GDVGKEHEK  
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ----------  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -------FSL V HNSSHWYTTV Site 2471
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -------FEE R TKNGVVKGQP Site 2468
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -------MGT E TIPIQGYRVD Site 2707
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -------FEE R TKNGVVKGQP Site 2468
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -------DDT F EKNLSSVRQV Site 2468
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -------HLP E LNHLPELKGV Site 2721
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -------WEE R AKNGVIRGQP Site 2468
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -------SNS V VHAETKLQNY Site 2775
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -------MTK L SSCSSPALRS Site 2505
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO APSYAYANRA V VAPPPAHNSS Site 2875
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -------DDT F EKNLSSVRQV Site 2468
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -------EDL A KEHNKPTRKT Site 2469
Homo.sapiens.HIPK3..Homeodomain.interacting.protei PMLQHPTYNI S HPSGIVHQVP Site 2876
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -------PSM F PTWPAKSEQQ Site 2471
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -------SRK P HNYPLPGQIE Site 2867
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -------PSM F PTWPAKSEQQ Site 2471
Naegleria.gruberi.LF4 -------SPY M NDHPPVSSSM Site 2694
Saccharomyces.bayanus.IME2 LPFVNDSNYT H TEKPYHKGSN Site 2691
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -------RIH P LSQATGGSSN Site 2846
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -------ARR V PSRLPREAPE Site 2703
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - APEPAETSSS  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 NLPSPYPTPS P SAKCDGVSFG Site 2743
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -------PKW E KDMSRLSMFE Site 2468
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -------QRI Q LAPLGASASD Site 2736
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -------FEE K TKNGVVKGQP Site 2468
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ----------  
Penicillium.marneffei.IME2 TRTLNPYPTP S PSAKRDGVSF Site 2746
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a RLSASPPGRP A PVDGGASPQF Site 2739
Drosophila.melanogaster.MAK -------ATQ S SLEVNNGSHA Site 2740
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -------GNS N SVVHAETKLQ Site 2773
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -------SEE K TKNGVVKGQP Site 2468
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -------MDW E ERSKNGVVKD Site 2466
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -------PPL F NFSAGELSIQ Site 2469
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - -----AEAEA  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a RLSASPPGHP T PIDGGASPQF Site 2739
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ---------D  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -------SSS S NSNANVSSNL Site 2504
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 ITEYDSENTY S KNDHDYSWEG Site 2706
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - ----------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - --------AH  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -------PGS G NNSSSGGASG Site 2689
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -------VAS V QQVPPRLPPE Site 2706
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -------LRA L EGIARNSRLI Site 2714
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -------EMM P KFPTISKSFK Site 2469
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -------LQV R GTSMCPTLQV Site 2876
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa -------LLK E LIYNEMLAYH Site 2472
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -------EER T KNGVIRGQPS Site 2469
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ---------E  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -------RFD D SYEKSLTSVW Site 2468
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -------SEE K TKNGVVKGQP Site 2468
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 LSQVADCSSQ Q KLENGCYTLY Site 2682
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -------RKL L HLSSNHPIPA Site 2812
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D DRIYGLFWLN D RRQEEKYRRK Site 2841
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U VASQGSARHA A YPASIVPVSM Site 2762
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - -GELTRQHDK  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -------SPG E LSIQPSLNAI Site 2469
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - --------AH  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - VNQMAKGTTE  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -------PAL F NFTTQELSSN Site 2469
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable VVENVGMLLV H LASYEEILPE Site 2719
Aspergillus.fumigatus.IME2 RQAPGNDGSR P LPSPYPTPSP Site 2735
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan SHAQGPPLKK V RVVPPTATSS Site 2499
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -------PKW E KDMSRLSMFE Site 2468
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma RHTVQHTAYP A SIVHQVPVSM Site 2876
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - --ESESVTRE  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 EDLPLKSNQM T ELEPRTIPIS Site 2728
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -------QRI H LAPLNATASE Site 2736
Schizosaccharomyces.pombe.IME2 ATQDLLRKTL A YTNSSGTSTV Site 2764
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom GPGIKDRPMD A ERPGPELFDP Site 2732
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ---------D  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -------TKL H NSRNPDASPR Site 2468
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -------HQK V NAANSNHRLE Site 2498
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -------QRV H LAPIPDPSPG Site 2754
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -------QSF D MGVADGPQDG Site 2753
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----------  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a KRGERGREAG L LSGGGEFLLS Site 2787
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ----------  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U SRHTTFATHP S TLVHQVPVSV Site 2876
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - --EEPHFDRI  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -------PAL F NFTTQELSSN Site 2469
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -------EQN H FAAESYAVGE Site 2692
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 ENDIPNYIHY P EPELAQRCHI Site 2718
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 SVLTVGTVDS D PGPRRRSEWA Site 2775
Homo.sapiens.HIPK4..Homeodomain.interacting.protei PNIDNMTMEA E RPDPELFDPS Site 2733
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 LNSSQEVSCD Y KMVSKSYFQK Site 2517
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom RHAAAYTTHP S TLVHQVPVSV Site 2876
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A AGGMDHSAAK R VRMSGPNGQP Site 2674
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ---------P  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - --DLEGCKEP  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -------GVV R LSSYSSPTLQ Site 2504
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -------QSF D MGVADGPQDG Site 2753
Mus.musculus.ICK..Serine.threonine.protein.kinase. -------QRV Q LAPLAAPPPG Site 2754
Saccharomyces.castelli.IME2 HKEQTNNPFT R RTFPMNHEQE Site 2733
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - --------PS  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei RHTVQHTAYP A SIVHQVPVSM Site 2876
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 ENSEGIDGYK L ISHPWMSKVK Site 2675
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQQQQMNAE Site 2490
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -------PSL E SILLPPHVSK Site 2470
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNNN N NNNNNNSGHQ Site 2503
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -------EPV K LGGGYGGVAG Site 2685
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -------PNG R ELPPLFNFTA Site 2469
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ---------D  
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -------DTN K TQHNIKYIDS Site 2712
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U PILQHPTYSL S HPSGIVHQVA Site 2876
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -------PSM F PTWPAKSEQQ Site 2471
Candida.dubliniensis.IME2 ERNSSGNESY K LFAQPWLLKV Site 2674
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -------VMD W EERSKNGVKD Site 2469
Aspergillus.niger.IME2 LPSPYPTPSP S AKCDGVCFGH Site 2746
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -------VTI Q SKDTKGMEVK Site 2735
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 ATIYQPLPRP P TLSLTEVSIS Site 2730
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - ---TKLPDSR  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 SIEPSYIHYD Q PTANQVRHHR Site 2707
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 LPYVNNSNYT H TDRSHHRGDN Site 2691
Schizosaccharomyces.japonicus.b.IME2 TPKSMIPRLV R KSYSGKSNCS Site 2765
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a KLGERGHEEG F LNNSGEFLFN Site 2787
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -------TVQ A KEMKGMEVKQ Site 2742
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ---SEVEAPP  
Candida.albicans.IME2 ERNSSGNESY K LFAQPWLLKV Site 2674
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 HSNGPAGPTL S DQMAIDDSLD Site 2741
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -------QSF D MGVADGPQDG Site 2753
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -------SEE K TKNGVVKSQP Site 2468
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -------SQF K QLGRDEPIIV Site 2505
Neurospora.crassa.IME2 LGLMNPYPTP S PSASGQNIFF Site 2759
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 LARNYIHEST H QNCHAIDEMS Site 2748
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - GSQMARGATD  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -------FLP V FHKKTAYFTA Site 2717
Schizosaccharomyces.pombe.b.IME2 ENEIRDSIVP S CSQPDESNKE Site 2702
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom PMLQHPTYNI S HPSGIVHQVP Site 2876
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ---SEAEAPP  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable KEILPEMESG G IKDLVQVIRG Site 2734
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 NDSPLVDQFG G SSSDIRIETT Site 2745
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - ----------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -------SRH N SGTVRDLPPL Site 2470
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -------TKL H NSRNPDASPR Site 2468
Species Residue at Site 4863
in 'msaprobs'
muscle

The residue for every species at site 4863 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -------DDT F EKNLSSVRQV Site 2468
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 11:27, August 8th 2020
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