cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4862 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4862 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4862 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4862 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 TKRSLKNFKG E EADEEKNDSH Site 2775
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 MDSGNNKENL G PYDIEVDESQ Site 2468
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 --------VA G AAGMAVTGGH Site 2764
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --------MY H CSRDEGTIER Site 2468
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho SSHTQGPPLK K VRVVPPTTTS Site 2498
Schizosaccharomyces.octosporus.b.IME2 AVGTPKDAMG Q GLKIIGINHS Site 2745
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei SRHAAAYTTH P STLVHQVPVS Site 2875
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - --GDVGKEHE  
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ----------  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. --------FS L VHNSSHWYTT Site 2470
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --------FE E RTKNGVVKGQ Site 2467
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --------MG T ETIPIQGYRV Site 2706
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --------FE E RTKNGVVKGQ Site 2467
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --------DD T FEKNLSSVRQ Site 2467
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --------HL P ELNHLPELKG Site 2720
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --------WE E RAKNGVIRGQ Site 2467
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --------SN S VVHAETKLQN Site 2774
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. --------MT K LSSCSSPALR Site 2504
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO AAPSYAYANR A VVAPPPAHNS Site 2874
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --------DD T FEKNLSSVRQ Site 2467
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --------ED L AKEHNKPTRK Site 2468
Homo.sapiens.HIPK3..Homeodomain.interacting.protei RPMLQHPTYN I SHPSGIVHQV Site 2875
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --------PS M FPTWPAKSEQ Site 2470
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --------SR K PHNYPLPGQI Site 2866
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --------PS M FPTWPAKSEQ Site 2470
Naegleria.gruberi.LF4 --------SP Y MNDHPPVSSS Site 2693
Saccharomyces.bayanus.IME2 VLPFVNDSNY T HTEKPYHKGS Site 2690
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --------RI H PLSQATGGSS Site 2845
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --------AR R VPSRLPREAP Site 2702
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - -APEPAETSS  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 HNLPSPYPTP S PSAKCDGVSF Site 2742
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --------PK W EKDMSRLSMF Site 2467
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --------QR I QLAPLGASAS Site 2735
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --------FE E KTKNGVVKGQ Site 2467
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ----------  
Penicillium.marneffei.IME2 STRTLNPYPT P SPSAKRDGVS Site 2745
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a RRLSASPPGR P APVDGGASPQ Site 2738
Drosophila.melanogaster.MAK --------AT Q SSLEVNNGSH Site 2739
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --------GN S NSVVHAETKL Site 2772
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --------SE E KTKNGVVKGQ Site 2467
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --------MD W EERSKNGVVK Site 2465
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --------PP L FNFSAGELSI Site 2468
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ------AEAE  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a PRLSASPPGH P TPIDGGASPQ Site 2738
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --------SS S SNSNANVSSN Site 2503
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 IITEYDSENT Y SKNDHDYSWE Site 2705
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - ----------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ---------A  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --------PG S GNNSSSGGAS Site 2688
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --------VA S VQQVPPRLPP Site 2705
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d --------LR A LEGIARNSRL Site 2713
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --------EM M PKFPTISKSF Site 2468
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --------LQ V RGTSMCPTLQ Site 2875
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa --------LL K ELIYNEMLAY Site 2471
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --------EE R TKNGVIRGQP Site 2468
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --------RF D DSYEKSLTSV Site 2467
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --------SE E KTKNGVVKGQ Site 2467
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 YLSQVADCSS Q QKLENGCYTL Site 2681
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --------RK L LHLSSNHPIP Site 2811
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D HDRIYGLFWL N DRRQEEKYRR Site 2840
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U LVASQGSARH A AYPASIVPVS Site 2761
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - --GELTRQHD  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --------SP G ELSIQPSLNA Site 2468
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ---------A  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - -VNQMAKGTT  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --------PA L FNFTTQELSS Site 2468
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable EVVENVGMLL V HLASYEEILP Site 2718
Aspergillus.fumigatus.IME2 SRQAPGNDGS R PLPSPYPTPS Site 2734
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan NSHAQGPPLK K VRVVPPTATS Site 2498
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --------PK W EKDMSRLSMF Site 2467
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ARHTVQHTAY P ASIVHQVPVS Site 2875
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ---ESESVTR  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 IEDLPLKSNQ M TELEPRTIPI Site 2727
Homo.sapiens.MAK..Serine.threonine.protein.kinase. --------QR I HLAPLNATAS Site 2735
Schizosaccharomyces.pombe.IME2 HATQDLLRKT L AYTNSSGTST Site 2763
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom DGPGIKDRPM D AERPGPELFD Site 2731
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --------TK L HNSRNPDASP Site 2467
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --------HQ K VNAANSNHRL Site 2497
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --------QR V HLAPIPDPSP Site 2753
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --------QS F DMGVADGPQD Site 2752
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----------  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a GKRGERGREA G LLSGGGEFLL Site 2786
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ----------  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U SSRHTTFATH P STLVHQVPVS Site 2875
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ---EEPHFDR  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --------PA L FNFTTQELSS Site 2468
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --------EQ N HFAAESYAVG Site 2691
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 NENDIPNYIH Y PEPELAQRCH Site 2717
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 RSVLTVGTVD S DPGPRRRSEW Site 2774
Homo.sapiens.HIPK4..Homeodomain.interacting.protei GPNIDNMTME A ERPDPELFDP Site 2732
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 QLNSSQEVSC D YKMVSKSYFQ Site 2516
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom SRHAAAYTTH P STLVHQVPVS Site 2875
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QAGGMDHSAA K RVRMSGPNGQ Site 2673
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ---DLEGCKE  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --------GV V RLSSYSSPTL Site 2503
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --------QS F DMGVADGPQD Site 2752
Mus.musculus.ICK..Serine.threonine.protein.kinase. --------QR V QLAPLAAPPP Site 2753
Saccharomyces.castelli.IME2 SHKEQTNNPF T RRTFPMNHEQ Site 2732
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ---------P  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ARHTVQHTAY P ASIVHQVPVS Site 2875
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 EENSEGIDGY K LISHPWMSKV Site 2674
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQQQQQMNA Site 2489
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --------PS L ESILLPPHVS Site 2469
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNNN N NNNNNNNSGH Site 2502
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --------EP V KLGGGYGGVA Site 2684
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --------PN G RELPPLFNFT Site 2468
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de --------DT N KTQHNIKYID Site 2711
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U RPILQHPTYS L SHPSGIVHQV Site 2875
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --------PS M FPTWPAKSEQ Site 2470
Candida.dubliniensis.IME2 PERNSSGNES Y KLFAQPWLLK Site 2673
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --------VM D WEERSKNGVK Site 2468
Aspergillus.niger.IME2 PLPSPYPTPS P SAKCDGVCFG Site 2745
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d --------VT I QSKDTKGMEV Site 2734
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 SATIYQPLPR P PTLSLTEVSI Site 2729
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - ----TKLPDS  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 ESIEPSYIHY D QPTANQVRHH Site 2706
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 VLPYVNNSNY T HTDRSHHRGD Site 2690
Schizosaccharomyces.japonicus.b.IME2 MTPKSMIPRL V RKSYSGKSNC Site 2764
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a GKLGERGHEE G FLNNSGEFLF Site 2786
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de --------TV Q AKEMKGMEVK Site 2741
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ----SEVEAP  
Candida.albicans.IME2 PERNSSGNES Y KLFAQPWLLK Site 2673
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 MHSNGPAGPT L SDQMAIDDSL Site 2740
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --------QS F DMGVADGPQD Site 2752
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --------SE E KTKNGVVKSQ Site 2467
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME --------SQ F KQLGRDEPII Site 2504
Neurospora.crassa.IME2 NLGLMNPYPT P SPSASGQNIF Site 2758
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 PLARNYIHES T HQNCHAIDEM Site 2747
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - -GSQMARGAT  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --------FL P VFHKKTAYFT Site 2716
Schizosaccharomyces.pombe.b.IME2 KENEIRDSIV P SCSQPDESNK Site 2701
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom RPMLQHPTYN I SHPSGIVHQV Site 2875
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ----SEAEAP  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable YKEILPEMES G GIKDLVQVIR Site 2733
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 VNDSPLVDQF G GSSSDIRIET Site 2744
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - ----------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --------SR H NSGTVRDLPP Site 2469
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --------TK L HNSRNPDASP Site 2467
Species Residue at Site 4862
in 'msaprobs'
muscle

The residue for every species at site 4862 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --------DD T FEKNLSSVRQ Site 2467
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 11:08, February 18th 2020
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