cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4859 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4859 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4859 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4859 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 AQVTKRSLKN F KGEEADEEKN Site 2772
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 YGYMDSGNNK E NLGPYDIEVD Site 2465
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - VAGAAGMAVT  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - MYHCSRDEGT  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho NQDSSHTQGP P LKKVRVVPPT Site 2495
Schizosaccharomyces.octosporus.b.IME2 YDTAVGTPKD A MGQGLKIIGI Site 2742
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei QGSSRHAAAY T THPSTLVHQV Site 2872
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - -----GDVGK  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ----------  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - FSLVHNSSHW  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- - FEERTKNGVV  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - MGTETIPIQG  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- - FEERTKNGVV  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - DDTFEKNLSS  
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - HLPELNHLPE  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - WEERAKNGVI  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- - SNSVVHAETK  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - MTKLSSCSSP  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO VSQAAPSYAY A NRAVVAPPPA Site 2871
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - DDTFEKNLSS  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - EDLAKEHNKP  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei CTSRPMLQHP T YNISHPSGIV Site 2872
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - PSMFPTWPAK  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - SRKPHNYPLP  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - PSMFPTWPAK  
Naegleria.gruberi.LF4 ---------- - SPYMNDHPPV  
Saccharomyces.bayanus.IME2 EDIVLPFVND S NYTHTEKPYH Site 2687
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - RIHPLSQATG  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ARRVPSRLPR  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----APEPAE  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 EQSHNLPSPY P TPSPSAKCDG Site 2739
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - PKWEKDMSRL  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - QRIQLAPLGA  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- - FEEKTKNGVV  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ----------  
Penicillium.marneffei.IME2 VNDSTRTLNP Y PTPSPSAKRD Site 2742
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a DPERRLSASP P GRPAPVDGGA Site 2735
Drosophila.melanogaster.MAK ---------- - ATQSSLEVNN  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- - GNSNSVVHAE  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- - SEEKTKNGVV  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - MDWEERSKNG  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - PPLFNFSAGE  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ---------A  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a APEPRLSASP P GHPTPIDGGA Site 2735
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - SSSSNSNANV  
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 GDAIITEYDS E NTYSKNDHDY Site 2702
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - ----------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - PGSGNNSSSG  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - VASVQQVPPR  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - LRALEGIARN  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - EMMPKFPTIS  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - LQVRGTSMCP  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - LLKELIYNEM  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - EERTKNGVIR  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - RFDDSYEKSL  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- - SEEKTKNGVV  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 FSDYLSQVAD C SSQQKLENGC Site 2678
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - RKLLHLSSNH  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D QREHDRIYGL F WLNDRRQEEK Site 2837
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U VAHLVASQGS A RHAAYPASIV Site 2758
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - -----GELTR  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - SPGELSIQPS  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----VNQMAK  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - PALFNFTTQE  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable DDPEVVENVG M LLVHLASYEE Site 2715
Aspergillus.fumigatus.IME2 SNYSRQAPGN D GSRPLPSPYP Site 2731
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan NPDNSHAQGP P LKKVRVVPPT Site 2495
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - PKWEKDMSRL  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma QGSARHTVQH T AYPASIVHQV Site 2872
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ------ESES  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 NMSIEDLPLK S NQMTELEPRT Site 2724
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - QRIHLAPLNA  
Schizosaccharomyces.pombe.IME2 PSFHATQDLL R KTLAYTNSSG Site 2760
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom REGDGPGIKD R PMDAERPGPE Site 2728
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - TKLHNSRNPD  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - HQKVNAANSN  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - QRVHLAPIPD  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - QSFDMGVADG  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----------  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a VEEGKRGERG R EAGLLSGGGE Site 2783
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ----------  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PQGSSRHTTF A THPSTLVHQV Site 2872
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ------EEPH  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - PALFNFTTQE  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - EQNHFAAESY  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 AGSNENDIPN Y IHYPEPELAQ Site 2714
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 LRSRSVLTVG T VDSDPGPRRR Site 2771
Homo.sapiens.HIPK4..Homeodomain.interacting.protei DEDGPNIDNM T MEAERPDPEL Site 2729
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 QEIQLNSSQE V SCDYKMVSKS Site 2513
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom QGSSRHAAAY T THPSTLVHQV Site 2872
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQAQAGGMDH S AAKRVRMSGP Site 2670
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ------DLEG  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - GVVRLSSYSS  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - QSFDMGVADG  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - QRVQLAPLAA  
Saccharomyces.castelli.IME2 YVFSHKEQTN N PFTRRTFPMN Site 2729
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei QGSARHTVQH T AYPASIVHQV Site 2872
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 DQGEENSEGI D GYKLISHPWM Site 2671
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQQQQQQQQ Site 2486
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - PSLESILLPP  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNNN N NNNNNNNNNN Site 2499
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - EPVKLGGGYG  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - PNGRELPPLF  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - DTNKTQHNIK  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U CTSRPILQHP T YSLSHPSGIV Site 2872
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - PSMFPTWPAK  
Candida.dubliniensis.IME2 AKQPERNSSG N ESYKLFAQPW Site 2527
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - VMDWEERSKN  
Aspergillus.niger.IME2 SSRPLPSPYP T PSPSAKCDGV Site 2742
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - VTIQSKDTKG  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 KSMSATIYQP L PRPPTLSLTE Site 2726
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - -------TKL  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 AILESIEPSY I HYDQPTANQV Site 2703
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 EDIVLPYVNN S NYTHTDRSHH Site 2687
Schizosaccharomyces.japonicus.b.IME2 SVAMTPKSMI P RLVRKSYSGK Site 2761
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a VEDGKLGERG H EEGFLNNSGE Site 2783
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - TVQAKEMKGM  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - -------SEV  
Candida.albicans.IME2 AKQPERNSSG N ESYKLFAQPW Site 2527
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 GNYMHSNGPA G PTLSDQMAID Site 2737
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - QSFDMGVADG  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- - SEEKTKNGVV  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - SQFKQLGRDE  
Neurospora.crassa.IME2 SASNLGLMNP Y PTPSPSASGQ Site 2755
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 NIEPLARNYI H ESTHQNCHAI Site 2744
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----GSQMAR  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - FLPVFHKKTA  
Schizosaccharomyces.pombe.b.IME2 PFKKENEIRD S IVPSCSQPDE Site 2698
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom CTSRPMLQHP T YNISHPSGIV Site 2872
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - -------SEA  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable LTSYKEILPE M ESGGIKDLVQ Site 2730
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 SPSVNDSPLV D QFGGSSSDIR Site 2741
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - ----------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - SRHNSGTVRD  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - TKLHNSRNPD  
Species Residue at Site 4859
in 'msaprobs'
muscle

The residue for every species at site 4859 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - DDTFEKNLSS  
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 11:50, October 23rd 2020
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