cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4808 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4808 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4808 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4808 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 DRSATLRSSK F SGLSNDSSRS Site 2721
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 KAMETSLFKR S GNVSLLSATA Site 2259
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 SVNKQASQGH G GGGPG----- Site 2756
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---TSDVFAG C QIPYPKREFL Site 2444
Schizosaccharomyces.octosporus.b.IME2 KCVNHVPNRD E NKACEEVNWS Site 2691
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei QHGSPLHSTG H PHLAPAPAHL Site 2821
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----A-----  
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ----------  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LYLLDISYKV D NSVFL----- Site 2462
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET HSIDEWKELI Y KEVMN----- Site 2459
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----G-----  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U HSIDEWKELI Y KEVMN----- Site 2459
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo GRVYTSDFEP V TNPKF----- Site 2459
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----V-----  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. HTIEEWKELI Y KEVLD----- Site 2459
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ALHPVVGQPF L KAEGS----- Site 2766
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. QGPTSLMELP K LRLSG----- Site 2496
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO VAPHPHHHSH G HHHHQAGTPL Site 2820
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl GRVYTSDFEP I TNPKF----- Site 2459
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----I-----  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei FTLSHGSPNH T AVHAHLAGNT Site 2821
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - ---ID-----  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d NEVRGHPAGS V TPNTK----- Site 2858
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - ---ID-----  
Naegleria.gruberi.LF4 FFSSMKRNTN M KTVNL----- Site 2685
Saccharomyces.bayanus.IME2 SLSNIRQLTN D IEIINKDEAD Site 2498
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d FQPLTAQQAK N SFSEI----- Site 2837
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a LIRSDPARGG G PRAVG----- Site 2694
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 MTNHPVHRYE T PEEEDELLDE Site 2688
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se RLFAQDLDPR H ESPFD----- Site 2459
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. TGYMPSFLKK E VGSAG----- Site 2727
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. HTIEEWKELI Y KEVMN----- Site 2459
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ----------  
Penicillium.marneffei.IME2 HPVHRYETPE E EDELLDEVLH Site 2691
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a HWKQAAGAPP T ATGLADTGAR Site 2684
Drosophila.melanogaster.MAK DLFGESYLPR P GLRKK----- Site 2731
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PLALHSVVGQ P FLKSE----- Site 2764
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin HTIEEWKELI Y KEVMN----- Site 2459
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a REHAIEEWKE L IYKEV----- Site 2457
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -------TQL P NNRPL----- Site 2460
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a HWKQAASAPP R AAVAADPVSR Site 2684
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----V-----  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD LPSPLFPNLA I SSSNQ----- Site 2495
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 DSFDFENKCI K NIGDDSNITP Site 2513
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin GFNHHPPQQQ T VNNNG----- Site 2474
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GSGGATAGTG G ASAGG----- Site 2680
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. NQALIRGDWN R GGGVR----- Site 2697
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----E-----  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - --QSI-----  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d NRALHRPISS P APYPV----- Site 2867
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa LHKFSLNFEA W DLNRD----- Site 2463
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac TIEEWKELIY K EVMDL----- Site 2460
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri SSGRVYTADF E PTATN----- Site 2459
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha HTIEEWKELI Y KEVMN----- Site 2459
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 KPAQLPTLPI E KPLLPSPLVQ Site 2489
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar EKMTEIQPHS Q PLKSL----- Site 2803
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D KELNPAPDSG G RDSGSEHSPG Site 2786
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U APTLAQAPYS F PHSSPSHGAV Site 2707
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----V-----  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -------RPL P PLFNF----- Site 2243
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro VDTKSVFEGS S ITYPT----- Site 2475
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -------VKL P NGRDT----- Site 2460
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable LCQDRALLVN N AYRGLASLVK Site 2519
Aspergillus.fumigatus.IME2 SRTRRALQMS S HPVHRYETPE Site 2680
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---TSDVFAG C QIPYPKREFL Site 2254
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S RIFSQELDPK H ESPFD----- Site 2459
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PYTFPHNSPS H GTVHPHLAAA Site 2821
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 VPERCPTDYT A FTFNNITGND Site 2673
Homo.sapiens.MAK..Serine.threonine.protein.kinase. SGYIPSFLKK E VQSAG----- Site 2727
Schizosaccharomyces.pombe.IME2 SILSHEDKRE N QSVNSESSKY Site 2709
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom KAPAGSKSDS N FSNLIRLSQA Site 2677
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----K-----  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. GNYVPSFLKK E IGSAM----- Site 2745
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act SGAGYGVGFD L EEFLN----- Site 2744
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----------  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a FVSGGEECFL I SQFCCEVRKD Site 2732
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ----------  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U HSSPLHSTVH P HLAAAATATS Site 2821
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -------VKL P NGRDT----- Site 2460
Drosophila.melanogaster.GSK3H..Putative.glycogen.s GDHVAVGTMP M EPLTL----- Site 2683
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 SSEPQLNDEG Y KYLKIQNIGG Site 2525
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 SGRSGRSGRS G LNASALADLD Site 2720
Homo.sapiens.HIPK4..Homeodomain.interacting.protei PPAGSKSDSN F SNLIRLSQVS Site 2678
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 LLPTPVSPTE S FGGACEEYDE Site 2462
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom QHGSPLHSTG H PHLAPAPAHL Site 2821
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQQQQANQQ A QQNQQQQANH Site 2481
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. RRGPAYVMEL P KLKLS----- Site 2495
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a SGAGYGVGFD L EEFLN----- Site 2744
Mus.musculus.ICK..Serine.threonine.protein.kinase. GSYIPSFLKK E IGSVM----- Site 2745
Saccharomyces.castelli.IME2 ESESFNQYIS E MGFNIDDYEQ Site 2678
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei FPHNSPSHGT V HPHLAAAAAA Site 2821
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 LNKLVGIPNS P SRKLMAPAKT Site 2481
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ---QDVFAGC  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G EFPLSLTLHP K NLAIR----- Site 2461
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - ----VNENAF  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF LGVQGVGSRN V KPGAR----- Site 2676
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - -GIKL-----  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de QNNSKVQTTS R ASENA----- Site 2703
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U FTLQHGSPTH S ALHAHLAGST Site 2821
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - ---ID-----  
Candida.dubliniensis.IME2 KLAGIPNSPS R KLLTPLKLQK Site 2476
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a EREHAIEEWK E LIYKE----- Site 2460
Aspergillus.niger.IME2 NPIHRYETPE E EDELLDEVLH Site 2691
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----P-----  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 FTSERSSVDH I SSPSHAERHC Site 2675
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 PLSRDLGHEL A LSSSLQNAED Site 2514
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 SLSNIRQLTN D IEIINKDEAD Site 2498
Schizosaccharomyces.japonicus.b.IME2 LKPENCVKVT T EKTPLNCGDM Site 2710
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a QFVSGGEDCF F INQFCEVRKD Site 2732
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----F-----  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ----------  
Candida.albicans.IME2 KLAGIPNSPS R KLLTPSKLQK Site 2476
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 EIRATDKDEN N EVAVDKMKIS Site 2686
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina SGAGYGVGFD L EEFLN----- Site 2744
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. HTIEEWKELI Y KEVMN----- Site 2459
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME GARKAQASSP K PPSGG----- Site 2496
Neurospora.crassa.IME2 PVSSRTRRQQ A AQGVNQYDAP Site 2704
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 QPLYDDIFGT T ENIELDEDGD Site 2693
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace PVAGCHLCML A NARTI----- Site 2708
Schizosaccharomyces.pombe.b.IME2 NEQIDYLLTS I DYLPSYKPPS Site 2511
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom FTLSHGSPNH T AVHAHLAGST Site 2821
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable LASLAKVSEL V AFRIVVLEEG Site 2679
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 SHYEPPACLD E HSDSQLTAYE Site 2690
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil DNDIMNLGSR T KNNTQ----- Site 2475
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - TRLPD-----  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - ----------  
Species Residue at Site 4808
in 'msaprobs'
muscle

The residue for every species at site 4808 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo GRVYTSDFEP V TNPKF----- Site 2459
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 03:11, October 16th 2019
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