cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3999 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3999 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3999 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3999 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - ----------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - -P--------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - -I--------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 ---------- - ----------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - -A--------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - -P--------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - -P--------  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - -P--------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - -A--------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - -P--------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---EERSFHT S RN-------- Site 2524
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -EPPNKLWDS S RD-------- Site 2524
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos SPGQSKNFSL K NT-------- Site 2700
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - ----------  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -EQSQPCADN A VL-------- Site 2519
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - -P--------  
Strongylocentrotus.purpuratus.CDK1 ---------- - VP--------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - -G--------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - -N--------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - -R--------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - ----------  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- - -P--------  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- - -P--------  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - -P--------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - ----------  
Bombus.terrestris.CDK1 ---------- V PP-------- Site 2241
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - -P--------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d LGESSSYQGT G SV-------- Site 2738
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - -A--------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - -P--------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - -S--------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - ----------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - -A--------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- - ----------  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - -P--------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - -PEQPAVPSP  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci EPPNTKLWDS S RD-------- Site 2524
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - -P--------  
Naegleria.gruberi.LF4 ---------- - -L--------  
Saccharomyces.bayanus.IME2 EIRNNLALCQ L PD-------- Site 2479
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -EQSQPCAEN T VL-------- Site 2519
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - -P--------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki PFAKKASLLQ Q RQ-------- Site 2482
Dictyostelium.discoideum.DYRK1..Probable.serine.th PNPPILPNLK D LL-------- Site 2728
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ATLGPRLGLH G VP-------- Site 2725
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos QMTDANGNIQ Q RT-------- Site 2520
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - -P--------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - -P--------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos SAEQQSTSSP K ST-------- Site 2520
Aspergillus.nidulans.IME2 ---------- - -P--------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - ----------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - -P--------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- - -P--------  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - -P--------  
Penicillium.marneffei.IME2 ---------- - -P--------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - -P--------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - -P--------  
Drosophila.melanogaster.MAK ---------- - -I--------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de SHLGESNSYQ G TG-------- Site 2736
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - -P--------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - -P--------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- - -P--------  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - -P--------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - -P--------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki PVIAAANPLG M PV-------- Site 2519
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - -P--------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - RI--------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. PVIAAANPLG M PV-------- Site 2519
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - -A--------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ATLGPHLGLR G VP-------- Site 2725
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE DGQGASNSAS S QS-------- Site 2519
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - -E--------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - -P--------  
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - -P--------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 -FMKEYIGKQ A GN-------- Site 2494
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - -P--------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - -P--------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 --SKLPAGNY R GE-------- Site 2523
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - -G--------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - -P--------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos LMSETSGSIP L CS-------- Site 2520
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 -KALPGTHVP L VP-------- Site 2523
Saccharomyces.cerevisiae.SKY1 ---------- - -G--------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - -P--------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - -E--------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - -P--------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - -P--------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - -P--------  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - -P--------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - -P--------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - -P--------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- - -P--------  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 -SLSSTVLSP S LP-------- Site 2470
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - -P--------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -EPALKHWDT G RD-------- Site 2521
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ----------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - ----------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - -L--------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --SKLPAGNY R GE-------- Site 2523
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - -P--------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - -P--------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - -P--------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - -P--------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - -P--------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - -P--------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -QMANTVTGN K KT-------- Site 2521
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - -I--------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - ----------  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - -P--------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - RI--------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - -P--------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - -P--------  
Candida.glabrata.IME2 -ITFEEQNAN N IE-------- Site 2516
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - -P--------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - -R--------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - IE--------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -EPSTKMWDS S RD-------- Site 2524
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - -P--------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - -P--------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---EERSFHS S RN-------- Site 2524
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos DREESPMTGV C VQ-------- Site 2774
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - -P--------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - -P--------  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - -P--------  
Lachancea.thermotolerans.SKY1 ---------- - -G--------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - -P--------  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - -T--------  
Xenopus.tropicalis.IME2 ---------- - -P--------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- - ----------  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. PVISATTTLG M PV-------- Site 2519
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - -P--------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ------STEE Q HV-------- Site 2517
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - -P--------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos DREESPMTGV C VQ-------- Site 2774
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - -P--------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - -D--------  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - -P--------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 SREIQDNVHL Y SL-------- Site 2506
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - -P--------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 ---------- - ----------  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ---------- - -L--------  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - ----------  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - -P--------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - -A--------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - -T--------  
Homo.sapiens.CDK1 ---------- - -Q--------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca PVIPAPNTMA T QV-------- Site 2519
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - -P--------  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 VSLYFGNNLE N LD-------- Site 2521
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - -A--------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - -P--------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - -P--------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - -P--------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - ----------  
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 ---MMDSHFE G ET-------- Site 2462
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - -P--------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - -P--------  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR RMVSSNSPTP N AL-------- Site 2520
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - RI--------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - -A--------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - RI--------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - -I--------  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - ----------  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - -M--------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - -P--------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - -P--------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - -P--------  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei PVISATNTLG T PV-------- Site 2519
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - ----------  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - -P--------  
Candida.dubliniensis.IME2 -MMDTYFETD T VT-------- Site 2457
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - -P--------  
Aspergillus.niger.IME2 ---------- - -P--------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - -P--------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein PVIAAANPLG M PV-------- Site 2519
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty NVNAGSSRDM E KH-------- Site 2750
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 ------STLP A NL-------- Site 2523
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - -P--------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - -P--------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - -T--------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 EIGKPEQDSK R DT-------- Site 2495
Debaryomyces.hansenii.SKY1 ---------- - -R--------  
Saccharomyces.cerevisiae.IME2 EIRNNLALCQ L PD-------- Site 2479
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - -G--------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -EQSQPSSEN A VL-------- Site 2519
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - PM--------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - -C--------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - -I--------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - -P--------  
Candida.albicans.IME2 -MMDTYFETD T VS-------- Site 2263
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - -P--------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - -P--------  
Kluyveromyces.lactis.IME2 ENYRIQVLDE F DT-------- Site 2667
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - -P--------  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- - -P--------  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - -P--------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - -P--------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ------SPEQ R PV-------- Site 2521
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - -P--------  
Neurospora.crassa.IME2 ---------- - -P--------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - -P--------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - -P--------  
Ashbya.gossypii.IME2 KEISANIELY Q EP-------- Site 2674
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - -P--------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos LMSETNGSIP L CS-------- Site 2520
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - -P--------  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - -P--------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - ----------  
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch DAAGSKNWDS N RD-------- Site 2524
Saccoglossus.kowalevskii.CDK1 ---------- - QI--------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - -P--------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ------LAPQ Q CT-------- Site 2521
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ------PAAR Q YV-------- Site 2521
Yarrowia.lipolytica.IME2 QVQVSLSPQP C IK-------- Site 2671
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - -P--------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - -P--------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - -P--------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - -P--------  
Species Residue at Site 3999
in 'msaprobs'
muscle

The residue for every species at site 3999 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro GNVNANNREM E KL-------- Site 2736
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - ----------  
Scheffersomyces.stipitis.SKY1 ---------- - -R--------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 05:32, January 16th 2021
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