cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3998 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3998 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3998 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3998 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - ----------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - --P-------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - --I-------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 ---------- - ----------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - --A-------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - --P-------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - --P-------  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - --P-------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - --A-------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - --P-------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ----EERSFH T SRN------- Site 2523
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase --EPPNKLWD S SRD------- Site 2523
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos TSPGQSKNFS L KNT------- Site 2699
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - ----------  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --EQSQPCAD N AVL------- Site 2518
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - --P-------  
Strongylocentrotus.purpuratus.CDK1 ---------- - -VP-------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - --G-------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - --N-------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - --R-------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - ----------  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- - --P-------  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- - --P-------  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - --P-------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - ----------  
Bombus.terrestris.CDK1 ---------- - VPP-------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - --P-------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d HLGESSSYQG T GSV------- Site 2737
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - --A-------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - --P-------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - --S-------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - ----------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - --A-------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- - ----------  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - --P-------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - --PEQPAVPS  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -EPPNTKLWD S SRD------- Site 2523
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - --P-------  
Naegleria.gruberi.LF4 ---------- - --L-------  
Saccharomyces.bayanus.IME2 KEIRNNLALC Q LPD------- Site 2478
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --EQSQPCAE N TVL------- Site 2518
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - --P-------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki VPFAKKASLL Q QRQ------- Site 2481
Dictyostelium.discoideum.DYRK1..Probable.serine.th SPNPPILPNL K DLL------- Site 2727
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos PATLGPRLGL H GVP------- Site 2724
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos AQMTDANGNI Q QRT------- Site 2519
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - --P-------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - --P-------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos MSAEQQSTSS P KST------- Site 2519
Aspergillus.nidulans.IME2 ---------- - --P-------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - ----------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - --P-------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- - --P-------  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - --P-------  
Penicillium.marneffei.IME2 ---------- - --P-------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - --P-------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - --P-------  
Drosophila.melanogaster.MAK ---------- - --I-------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de VSHLGESNSY Q GTG------- Site 2735
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - --P-------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - --P-------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- - --P-------  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - --P-------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - --P-------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki SPVIAAANPL G MPV------- Site 2518
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - --P-------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - -RI-------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. SPVIAAANPL G MPV------- Site 2518
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - --A-------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos PATLGPHLGL R GVP------- Site 2724
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ADGQGASNSA S SQS------- Site 2518
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - --E-------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - --P-------  
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - --P-------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 --FMKEYIGK Q AGN------- Site 2493
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - --P-------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - --P-------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---SKLPAGN Y RGE------- Site 2522
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - --G-------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - --P-------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos NLMSETSGSI P LCS------- Site 2519
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 --KALPGTHV P LVP------- Site 2522
Saccharomyces.cerevisiae.SKY1 ---------- - --G-------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - --P-------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - --E-------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - --P-------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - --P-------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - --P-------  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - --P-------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - --P-------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - --P-------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- - --P-------  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 --SLSSTVLS P SLP------- Site 2469
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - --P-------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un --EPALKHWD T GRD------- Site 2520
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ----------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - ----------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - --L-------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---SKLPAGN Y RGE------- Site 2522
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - --P-------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - --P-------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - --P-------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - --P-------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - --P-------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - --P-------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha --QMANTVTG N KKT------- Site 2520
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - --I-------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - ----------  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - --P-------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - -RI-------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - --P-------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - --P-------  
Candida.glabrata.IME2 --ITFEEQNA N NIE------- Site 2515
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - --P-------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - --R-------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - -IE-------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara --EPSTKMWD S SRD------- Site 2523
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - --P-------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - --P-------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ----EERSFH S SRN------- Site 2523
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ADREESPMTG V CVQ------- Site 2773
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - --P-------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - --P-------  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - --P-------  
Lachancea.thermotolerans.SKY1 ---------- - --G-------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - --P-------  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - --T-------  
Xenopus.tropicalis.IME2 ---------- - --P-------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- - ----------  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. SPVISATTTL G MPV------- Site 2518
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - --P-------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -------STE E QHV------- Site 2516
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - --P-------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ADREESPMTG V CVQ------- Site 2773
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - --P-------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - --D-------  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - --P-------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 ISREIQDNVH L YSL------- Site 2505
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - --P-------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 ---------- - ----------  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ---------- - --L-------  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - ----------  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - --P-------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - --A-------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - --T-------  
Homo.sapiens.CDK1 ---------- - --Q-------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca SPVIPAPNTM A TQV------- Site 2518
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - --P-------  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 NVSLYFGNNL E NLD------- Site 2520
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - --A-------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - --P-------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - --P-------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - --P-------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - ----------  
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 ----MMDSHF E GET------- Site 2461
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - --P-------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - --P-------  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR GRMVSSNSPT P NAL------- Site 2519
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - -RI-------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - --A-------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - -RI-------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - --I-------  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - ----------  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - --M-------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - --P-------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - --P-------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - --P-------  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei SPVISATNTL G TPV------- Site 2518
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - ----------  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - --P-------  
Candida.dubliniensis.IME2 --MMDTYFET D TVT------- Site 2456
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - --P-------  
Aspergillus.niger.IME2 ---------- - --P-------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - --P-------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein SPVIAAANPL G MPV------- Site 2518
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty GNVNAGSSRD M EKH------- Site 2749
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 -------STL P ANL------- Site 2522
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - --P-------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - --P-------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - --T-------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 VEIGKPEQDS K RDT------- Site 2494
Debaryomyces.hansenii.SKY1 ---------- - --R-------  
Saccharomyces.cerevisiae.IME2 KEIRNNLALC Q LPD------- Site 2478
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - --G-------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --EQSQPSSE N AVL------- Site 2518
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - -PM-------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - --C-------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - --I-------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - --P-------  
Candida.albicans.IME2 --MMDTYFET D TVS------- Site 2262
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - --P-------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - --P-------  
Kluyveromyces.lactis.IME2 HENYRIQVLD E FDT------- Site 2530
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - --P-------  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- - --P-------  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - --P-------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - --P-------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -------SPE Q RPV------- Site 2520
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - --P-------  
Neurospora.crassa.IME2 ---------- - --P-------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - --P-------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - --P-------  
Ashbya.gossypii.IME2 TKEISANIEL Y QEP------- Site 2673
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - --P-------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos NLMSETNGSI P LCS------- Site 2519
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - --P-------  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - --P-------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - ----------  
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch SDAAGSKNWD S NRD------- Site 2523
Saccoglossus.kowalevskii.CDK1 ---------- - -QI-------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - --P-------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -------LAP Q QCT------- Site 2520
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -------PAA R QYV------- Site 2520
Yarrowia.lipolytica.IME2 TQVQVSLSPQ P CIK------- Site 2670
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - --P-------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - --P-------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - --P-------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - --P-------  
Species Residue at Site 3998
in 'msaprobs'
muscle

The residue for every species at site 3998 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro HGNVNANNRE M EKL------- Site 2735
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - ----------  
Scheffersomyces.stipitis.SKY1 ---------- - --R-------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 04:43, December 15th 2019
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