cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3994 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3994 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3994 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3994 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - ----------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ------P---  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ------I---  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 ---------- - ----------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ------A---  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - ------P---  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ------P---  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ------P---  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ------A---  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ------P---  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase --------EE R SFHTSRN--- Site 2519
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ------EPPN K LWDSSRD--- Site 2519
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos EVSMTSPGQS K NFSLKNT--- Site 2695
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - ----------  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ------EQSQ P CADNAVL--- Site 2514
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ------P---  
Strongylocentrotus.purpuratus.CDK1 ---------- - -----VP---  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ------G---  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ------N---  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ------R---  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - ----------  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- - ------P---  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- - ------P---  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ------P---  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - ----------  
Bombus.terrestris.CDK1 ---------- - ----VPP---  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - ------P---  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d GSLSHLGESS S YQGTGSV--- Site 2733
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ------A---  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ------P---  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ------S---  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - ----------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ------A---  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- - ----------  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - ------P---  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ------PEQP  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -----EPPNT K LWDSSRD--- Site 2519
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - ------P---  
Naegleria.gruberi.LF4 ---------- - ------L---  
Saccharomyces.bayanus.IME2 TDLSKEIRNN L ALCQLPD--- Site 2474
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ------EQSQ P CAENTVL--- Site 2514
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ------P---  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ADLPVPFAKK A SLLQQRQ--- Site 2477
Dictyostelium.discoideum.DYRK1..Probable.serine.th SNELSPNPPI L PNLKDLL--- Site 2723
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos PPDDPATLGP R LGLHGVP--- Site 2720
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos RTNLAQMTDA N GNIQQRT--- Site 2515
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ------P---  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ------P---  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos AGSEMSAEQQ S TSSPKST--- Site 2515
Aspergillus.nidulans.IME2 ---------- - ------P---  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - ----------  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ------P---  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- - ------P---  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ------P---  
Penicillium.marneffei.IME2 ---------- - ------P---  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ------P---  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - ------P---  
Drosophila.melanogaster.MAK ---------- - ------I---  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de FSGSVSHLGE S NSYQGTG--- Site 2731
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ------P---  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ------P---  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- - ------P---  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - ------P---  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ------P---  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki PLAGSPVIAA A NPLGMPV--- Site 2514
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - ------P---  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - -----RI---  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. PLAGSPVIAA A NPLGMPV--- Site 2514
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ------A---  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos PPDDPATLGP H LGLRGVP--- Site 2720
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE GTEQADGQGA S NSASSQS--- Site 2514
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ------E---  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - ------P---  
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ------P---  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 ------FMKE Y IGKQAGN--- Site 2489
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ------P---  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - ------P---  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 -------SKL P AGNYRGE--- Site 2518
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ------G---  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ------P---  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos KLKANLMSET S GSIPLCS--- Site 2515
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ------KALP G THVPLVP--- Site 2518
Saccharomyces.cerevisiae.SKY1 ---------- - ------G---  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ------P---  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - ------E---  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ------P---  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ------P---  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - ------P---  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ------P---  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - ------P---  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ------P---  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- - ------P---  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 ------SLSS T VLSPSLP--- Site 2465
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ------P---  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ------EPAL K HWDTGRD--- Site 2516
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ----------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - ----------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - ------L---  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -------SKL P AGNYRGE--- Site 2518
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - ------P---  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ------P---  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ------P---  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ------P---  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - ------P---  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ------P---  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ------QMAN T VTGNKKT--- Site 2516
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ------I---  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - ----------  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ------P---  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - -----RI---  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ------P---  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ------P---  
Candida.glabrata.IME2 ------ITFE E QNANNIE--- Site 2511
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ------P---  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ------R---  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - -----IE---  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ------EPST K MWDSSRD--- Site 2519
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - ------P---  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ------P---  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci --------EE R SFHSSRN--- Site 2519
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos MRQGADREES P MTGVCVQ--- Site 2769
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ------P---  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - ------P---  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ------P---  
Lachancea.thermotolerans.SKY1 ---------- - ------G---  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - ------P---  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ------T---  
Xenopus.tropicalis.IME2 ---------- - ------P---  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- - ----------  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. PLAGSPVISA T TTLGMPV--- Site 2514
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ------P---  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - STEEQHV---  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ------P---  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos MRQGADREES P MTGVCVQ--- Site 2769
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - ------P---  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - ------D---  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ------P---  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 DDFAISREIQ D NVHLYSL--- Site 2501
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ------P---  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 ---------- - ----------  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ---------- - ------L---  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - ----------  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - ------P---  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ------A---  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ------T---  
Homo.sapiens.CDK1 ---------- - ------Q---  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ISAGSPVIPA P NTMATQV--- Site 2514
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - ------P---  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ELDQNVSLYF G NNLENLD--- Site 2516
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ------A---  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ------P---  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ------P---  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ------P---  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - ----------  
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 --------MM D SHFEGET--- Site 2243
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ------P---  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - ------P---  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --EQGRMVSS N SPTPNAL--- Site 2515
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - -----RI---  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ------A---  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - -----RI---  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ------I---  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - ----------  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - ------M---  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - ------P---  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ------P---  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - ------P---  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei SLAGSPVISA T NTLGTPV--- Site 2514
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - ----------  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - ------P---  
Candida.dubliniensis.IME2 ------MMDT Y FETDTVT--- Site 2452
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - ------P---  
Aspergillus.niger.IME2 ---------- - ------P---  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ------P---  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein PLAGSPVIAA A NPLGMPV--- Site 2514
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty SMSHGNVNAG S SRDMEKH--- Site 2745
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 ---------- - STLPANL---  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - ------P---  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ------P---  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ------T---  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 HASSVEIGKP E QDSKRDT--- Site 2490
Debaryomyces.hansenii.SKY1 ---------- - ------R---  
Saccharomyces.cerevisiae.IME2 TELSKEIRNN L ALCQLPD--- Site 2474
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ------G---  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ------EQSQ P SSENAVL--- Site 2514
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - -----PM---  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ------C---  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ------I---  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ------P---  
Candida.albicans.IME2 ------MMDT Y FETDTVS--- Site 2258
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ------P---  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ------P---  
Kluyveromyces.lactis.IME2 IDMDHENYRI Q VLDEFDT--- Site 2525
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - ------P---  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- - ------P---  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ------P---  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ------P---  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - SPEQRPV---  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - ------P---  
Neurospora.crassa.IME2 ---------- - ------P---  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ------P---  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ------P---  
Ashbya.gossypii.IME2 PEELTKEISA N IELYQEP--- Site 2669
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ------P---  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos KLKANLMSET N GSIPLCS--- Site 2515
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ------P---  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ------P---  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - ----------  
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ----SDAAGS K NWDSNRD--- Site 2519
Saccoglossus.kowalevskii.CDK1 ---------- - -----QI---  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ------P---  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - LAPQQCT---  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - PAARQYV---  
Yarrowia.lipolytica.IME2 PESPTQVQVS L SPQPCIK--- Site 2666
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - ------P---  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ------P---  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - ------P---  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - ------P---  
Species Residue at Site 3994
in 'msaprobs'
muscle

The residue for every species at site 3994 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro VSMTHGNVNA N NREMEKL--- Site 2731
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - ----------  
Scheffersomyces.stipitis.SKY1 ---------- - ------R---  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 05:00, January 16th 2021
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