cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3636 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3636 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3636 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3636 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -------E-- - ----------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 -------M-- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -------D-- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -------P-- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -------G-- - ----------  
Candida.guilliermondii.IME2 ---------- - ----------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 -------E-- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -------D-- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -------L-- - ----------  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul -------D-- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -------A-- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. -------D-- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -------P-- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -------K-- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -------A-- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -------N-- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei VPQAPAAQ-- - ----------  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -------E-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -------A-- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -------K-- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -------D-- - ----------  
Strongylocentrotus.purpuratus.CDK1 -------M-- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 -------S-- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -------Q-- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -------E-- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -------P-- - ----------  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -------D-- - ----------  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 AVAPSINS-- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -------D-- - ----------  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -------D-- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - ----------  
Bombus.terrestris.CDK1 -------L-- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar KREFSKTD-- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -------D-- - ----------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -----LSKMA P PDLPHWQDCH Site 2242
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -------A-- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -------E-- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -------D-- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - ----------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -------A-- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -------E-- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei QQVTPLAP-- - ----------  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -------L-- - ----------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -------G-- - ----------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -------T-- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -------L-- - ----------  
Naegleria.gruberi.LF4 -------A-- - ----------  
Saccharomyces.bayanus.IME2 -------A-- - ----------  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -------K-- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -------E-- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -------K-- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -------D-- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -------C-- - ----------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -------Q-- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -------K-- - ----------  
Aspergillus.nidulans.IME2 -------D-- - ----------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -------L-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -------K-- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -------D-- - ----------  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -------D-- - ----------  
Penicillium.marneffei.IME2 -------D-- - ----------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -------D-- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -------C-- - ----------  
Drosophila.melanogaster.MAK -------R-- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -------LSK M APPDLPHWQD Site 2240
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -------L-- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -------L-- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -------D-- - ----------  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -------D-- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -------K-- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -------L-- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -------C-- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -------D-- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -------K-- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -------C-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -------E-- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -------K-- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -------K-- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -------D-- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -------D-- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -------E-- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -------D-- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -------D-- - ----------  
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -------G-- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -------D-- - ----------  
Debaryomyces.hansenii.IME2 FDDGYEKE-- - ----------  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -------D-- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -------P-- - ----------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 -------T-- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -------N-- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -------L-- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -------K-- - ----------  
Monosiga.brevicollis.CDK1 -------K-- - ----------  
Saccharomyces.cerevisiae.SKY1 PDRELYGS-- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -------D-- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -------M-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -------C-- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ELNYNHLP-- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -------F-- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa -------D-- - ----------  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -------R-- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -------L-- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -------D-- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -------D-- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -------D-- - ----------  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 KLLNSLSN-- - ----------  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -------D-- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -------G-- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -------Y-- - ----------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -------L-- - ----------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -------E-- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -------R-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -------T-- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -------G-- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -------G-- - ----------  
Salmo.salar.CDK1 -------M-- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -------A-- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -------L-- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -------H-- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -------D-- - ----------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -------L-- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -------P-- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -------D-- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -------L-- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PSKHAGYS-- - ----------  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -------D-- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -------P-- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -------L-- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -------E-- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -------D-- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -------E-- - ----------  
Candida.glabrata.IME2 IQNELSKP-- - ----------  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -------D-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -------N-- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -------D-- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -------E-- - ----------  
Branchiostoma.floridae.CDK1 -------K-- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -------M-- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -------D-- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD TNPQSKRN-- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -------S-- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -------P-- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -------P-- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -------D-- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -------K-- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -------D-- - ----------  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -------D-- - ----------  
Lachancea.thermotolerans.SKY1 SERKLYQS-- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -------F-- - ----------  
Dictyostelium.discoideum.CDK1 -------T-- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -------D-- - ----------  
Xenopus.tropicalis.IME2 -------R-- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PLQIQSGV-- - ----------  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -------K-- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -------R-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ------PQ-- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -------S-- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -------N-- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -------D-- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -------D-- - ----------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -------Q-- - ----------  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -------L-- - ----------  
Encephalitozoon.cuniculi.CDK1 -------L-- - ----------  
Saccharomyces.kluyveri.IME2 -------V-- - ----------  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -------D-- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -------S-- - ----------  
Cryptococcus.neoformans.IME2 -------P-- - ----------  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 -------T-- - ----------  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom VPQAPAAQ-- - ----------  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -------M-- - ----------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -------L-- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -------E-- - ----------  
Gallus.gallus.CDK2 -------R-- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -------K-- - ----------  
Homo.sapiens.CDK1 -------N-- - ----------  
Candida.albicans.CDK1 -------D-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -------K-- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -------D-- - ----------  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 -------A-- - ----------  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -------K-- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -------G-- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -------P-- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -------D-- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -------E-- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -------G-- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -------M-- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei KHAGYSVR-- - ----------  
Acyrthosiphon.pisum.CDK1 -------L-- - ----------  
Candida.tropicalis.CDK1 -------K-- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -------Q-- - ----------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -------Q-- - ----------  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -------K-- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -------E-- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -------A-- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -------P-- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -------D-- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki -------K-- - ----------  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -------E-- - ----------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -------D-- - ----------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -------D-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -------Y-- - ----------  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -------K-- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U VPAWQQMT-- - ----------  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -------L-- - ----------  
Candida.dubliniensis.IME2 -------A-- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -------D-- - ----------  
Aspergillus.niger.IME2 -------D-- - ----------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -------D-- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d KEFHFPEL-- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -------P-- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -------K-- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -------D-- - ----------  
Gallus.gallus.CDK1 -------K-- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -------P-- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -------D-- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -------N-- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -------D-- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 ---------- - ----------  
Debaryomyces.hansenii.SKY1 GLENVVLE-- - ----------  
Saccharomyces.cerevisiae.IME2 -------A-- - ----------  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -------K-- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -------K-- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -------F-- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -------R-- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -------R-- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -------D-- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de EFHFPELP-- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -------D-- - ----------  
Candida.albicans.IME2 -------T-- - ----------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -------Q-- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -------Q-- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -------D-- - ----------  
Kluyveromyces.lactis.IME2 -------M-- - ----------  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -------D-- - ----------  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -------D-- - ----------  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -------D-- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -------D-- - ----------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -------E-- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ------SG-- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -------L-- - ----------  
Neurospora.crassa.IME2 -------D-- - ----------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -------S-- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th -------A-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -------S-- - ----------  
Hydra.magnipapillata.CDK1 -------H-- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -------L-- - ----------  
Ashbya.gossypii.IME2 NSGTQHGP-- - ----------  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -------H-- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -------L-- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -------N-- - ----------  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -------D-- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom IRPGVLSQ-- - ----------  
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -------A-- - ----------  
Saccoglossus.kowalevskii.CDK1 -------V-- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -------D-- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -------S-- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ------PS-- - ----------  
Yarrowia.lipolytica.IME2 GSTKRNSL-- - ----------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -------I-- - ----------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -------M-- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -------D-- - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -------D-- - ----------  
Species Residue at Site 3636
in 'msaprobs'
muscle

The residue for every species at site 3636 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -------E-- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - ----------  
Scheffersomyces.stipitis.SKY1 GLENVVLE-- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -------P-- - ----------  

Generated by PhyloBot at 12:56, February 25th 2020
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