cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3630 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3630 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3630 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3630 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - --E-------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - --M-------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - --D-------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - --P-------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - --G-------  
Candida.guilliermondii.IME2 ---------- - ----------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - --E-------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - --D-------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - --L-------  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - --D-------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - --A-------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - --D-------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - --P-------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - --K-------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - --A-------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - --N-------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei DNAVPIVPQA P AAQ------- Site 2283
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - --E-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - --A-------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - --K-------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - --D-------  
Strongylocentrotus.purpuratus.CDK1 ---------- - --M-------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - --S-------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - --Q-------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - --E-------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - --P-------  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- - --D-------  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 LTHNLSAVAP S INS------- Site 2699
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- - --D-------  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - --D-------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - ----------  
Bombus.terrestris.CDK1 ---------- - --L-------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar LQANKKKREF S KTD------- Site 2713
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - --D-------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- - LSKMAPPDLP  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - --A-------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - --E-------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - --D-------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - ----------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - --A-------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - --E-------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei MLVPAWQQVT P LAP------- Site 2290
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - --L-------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - --G-------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - --T-------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - --L-------  
Naegleria.gruberi.LF4 ---------- - --A-------  
Saccharomyces.bayanus.IME2 ---------- - --A-------  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - --K-------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - --E-------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - --K-------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - --D-------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - --C-------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - --Q-------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - --K-------  
Aspergillus.nidulans.IME2 ---------- - --D-------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - --L-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - --K-------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- - --D-------  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - --D-------  
Penicillium.marneffei.IME2 ---------- - --D-------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - --D-------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - --C-------  
Drosophila.melanogaster.MAK ---------- - --R-------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- - --LSKMAPPD  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - --L-------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - --L-------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- - --D-------  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - --D-------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - --K-------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - --L-------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - --C-------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - --D-------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - --K-------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - --C-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - --E-------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - --K-------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - --K-------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - --D-------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - --D-------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - --E-------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - --D-------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - --D-------  
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - --G-------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - --D-------  
Debaryomyces.hansenii.IME2 FQIHDDFDDG Y EKE------- Site 2481
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - --D-------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - --P-------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - --T-------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - --N-------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - --L-------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - --K-------  
Monosiga.brevicollis.CDK1 ---------- - --K-------  
Saccharomyces.cerevisiae.SKY1 MEEIRVPDRE L YGS------- Site 2507
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - --D-------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - --M-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - --C-------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ADVRLPELNY N HLP------- Site 2706
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - --F-------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - --D-------  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - --R-------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - --L-------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - --D-------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - --D-------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- - --D-------  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 ITTTPAKLLN S LSN------- Site 2457
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - --D-------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - --G-------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - --Y-------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - --L-------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - --E-------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - --R-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - --T-------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - --G-------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - --G-------  
Salmo.salar.CDK1 ---------- - --M-------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - --A-------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - --L-------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - --H-------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - --D-------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - --L-------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - --P-------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - --D-------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - --L-------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma QGLQASPSKH A GYS------- Site 2266
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - --D-------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - --P-------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - --L-------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - --E-------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - --D-------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - --E-------  
Candida.glabrata.IME2 NRINEEIQNE L SKP------- Site 2503
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - --D-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - --N-------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - --D-------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - --E-------  
Branchiostoma.floridae.CDK1 ---------- - --K-------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - --M-------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - --D-------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD TSKIPLTNPQ S KRN------- Site 2490
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - --S-------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - --P-------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - --P-------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - --D-------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - --K-------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - --D-------  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - --D-------  
Lachancea.thermotolerans.SKY1 LEGVALSERK L YQS------- Site 2507
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - --F-------  
Dictyostelium.discoideum.CDK1 ---------- - --T-------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - --D-------  
Xenopus.tropicalis.IME2 ---------- - --R-------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U QAPAAQPLQI Q SGV------- Site 2291
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - --K-------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - --R-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - -PQ-------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --S-------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - --N-------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - --D-------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - --D-------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - --Q-------  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - --L-------  
Encephalitozoon.cuniculi.CDK1 ---------- - --L-------  
Saccharomyces.kluyveri.IME2 ---------- - --V-------  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - --D-------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --S-------  
Cryptococcus.neoformans.IME2 ---------- - --P-------  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ---------- - --T-------  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom DNAVPIVPQA P AAQ------- Site 2283
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - --M-------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - --L-------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - --E-------  
Gallus.gallus.CDK2 ---------- - --R-------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - --K-------  
Homo.sapiens.CDK1 ---------- - --N-------  
Candida.albicans.CDK1 ---------- - --D-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - --K-------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - --D-------  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---------- - --A-------  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - --K-------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - --G-------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --P-------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - --D-------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - --E-------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - --G-------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - --M-------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei LQASPSKHAG Y SVR------- Site 2268
Acyrthosiphon.pisum.CDK1 ---------- - --L-------  
Candida.tropicalis.CDK1 ---------- - --K-------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - --Q-------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - --Q-------  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - --K-------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - --E-------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - --A-------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - --P-------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - --D-------  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - --K-------  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - --E-------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - --D-------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - --D-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - --Y-------  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - --K-------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U GTQPILVPAW Q QMT------- Site 2286
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - --L-------  
Candida.dubliniensis.IME2 ---------- - --A-------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - --D-------  
Aspergillus.niger.IME2 ---------- - --D-------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - --D-------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d FSRSDRKEFH F PEL------- Site 2727
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --P-------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - --K-------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - --D-------  
Gallus.gallus.CDK1 ---------- - --K-------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - --P-------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - --D-------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - --N-------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - --D-------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 ---------- - ----------  
Debaryomyces.hansenii.SKY1 ------GLEN V VLE------- Site 2509
Saccharomyces.cerevisiae.IME2 ---------- - --A-------  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - --K-------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - --K-------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - --F-------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - --R-------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - --R-------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - --D-------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de PKCDRKEFHF P ELP------- Site 2734
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - --D-------  
Candida.albicans.IME2 ---------- - --T-------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - --Q-------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - --Q-------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - --D-------  
Kluyveromyces.lactis.IME2 ---------- - --M-------  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - --D-------  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- - --D-------  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - --D-------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - --D-------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - --E-------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - -SG-------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - --L-------  
Neurospora.crassa.IME2 ---------- - --D-------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - --S-------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - --A-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - --S-------  
Hydra.magnipapillata.CDK1 ---------- - --H-------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - --L-------  
Ashbya.gossypii.IME2 YLNRNNNSGT Q HGP------- Site 2412
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - --H-------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - --L-------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - --N-------  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - --D-------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom AVQPLQIRPG V LSQ------- Site 2294
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - --A-------  
Saccoglossus.kowalevskii.CDK1 ---------- - --V-------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - --D-------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - --S-------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - -PS-------  
Yarrowia.lipolytica.IME2 HLSGVNGSTK R NSL------- Site 2301
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - --I-------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - --M-------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - --D-------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - --D-------  
Species Residue at Site 3630
in 'msaprobs'
muscle

The residue for every species at site 3630 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - --E-------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - ----------  
Scheffersomyces.stipitis.SKY1 ------GLEN V VLE------- Site 2509
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - --P-------  

Generated by PhyloBot at 14:01, April 21st 2021
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