cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3627 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3627 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3627 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3627 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - -----E----  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - -----M----  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - -----D----  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - -----P----  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - -----G----  
Candida.guilliermondii.IME2 ---------- - ----------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - -----E----  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - -----D----  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - -----L----  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - -----D----  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - -----A----  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - -----D----  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - -----P----  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - -----K----  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - -----A----  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - -----N----  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei VRMDNAVPIV P QAPAAQ---- Site 2280
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - -----E----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - -----A----  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - -----K----  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - -----D----  
Strongylocentrotus.purpuratus.CDK1 ---------- - -----M----  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - -----S----  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - -----Q----  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - -----E----  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - -----P----  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- - -----D----  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 IPPLTHNLSA V APSINS---- Site 2696
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- - -----D----  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - -----D----  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - ----------  
Bombus.terrestris.CDK1 ---------- - -----L----  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar KNILQANKKK R EFSKTD---- Site 2710
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - -----D----  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- - ---LSKMAPP  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - -----A----  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - -----E----  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - -----D----  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - ----------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - -----A----  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - -----E----  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei TQQMLVPAWQ Q VTPLAP---- Site 2287
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - -----L----  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - -----G----  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - -----T----  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - -----L----  
Naegleria.gruberi.LF4 ---------- - -----A----  
Saccharomyces.bayanus.IME2 ---------- - -----A----  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - -----K----  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - -----E----  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - -----K----  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - -----D----  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - -----C----  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - -----Q----  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - -----K----  
Aspergillus.nidulans.IME2 ---------- - -----D----  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - -----L----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - -----K----  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- - -----D----  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - -----D----  
Penicillium.marneffei.IME2 ---------- - -----D----  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - -----D----  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - -----C----  
Drosophila.melanogaster.MAK ---------- - -----R----  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- - -----LSKMA  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - -----L----  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - -----L----  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- - -----D----  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - -----D----  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - -----K----  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - -----L----  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - -----C----  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - -----D----  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - -----K----  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - -----C----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - -----E----  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - -----K----  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - -----K----  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - -----D----  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - -----D----  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - -----E----  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - -----D----  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - -----D----  
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - -----G----  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - -----D----  
Debaryomyces.hansenii.IME2 KTEFQIHDDF D DGYEKE---- Site 2478
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - -----D----  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - -----P----  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - -----T----  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - -----N----  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - -----L----  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - -----K----  
Monosiga.brevicollis.CDK1 ---------- - -----K----  
Saccharomyces.cerevisiae.SKY1 --GMEEIRVP D RELYGS---- Site 2504
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - -----D----  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - -----M----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - -----C----  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d YPKADVRLPE L NYNHLP---- Site 2703
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - -----F----  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - -----D----  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - -----R----  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - -----L----  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - -----D----  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - -----D----  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- - -----D----  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 ITTITTTPAK L LNSLSN---- Site 2454
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - -----D----  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - -----G----  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - -----Y----  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - -----L----  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - -----E----  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - -----R----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - -----T----  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - -----G----  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - -----G----  
Salmo.salar.CDK1 ---------- - -----M----  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - -----A----  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - -----L----  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - -----H----  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - -----D----  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - -----L----  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - -----P----  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - -----D----  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - -----L----  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PGFQGLQASP S KHAGYS---- Site 2263
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - -----D----  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - -----P----  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - -----L----  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - -----E----  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - -----D----  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - -----E----  
Candida.glabrata.IME2 HQCNRINEEI Q NELSKP---- Site 2500
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - -----D----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - -----N----  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - -----D----  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - -----E----  
Branchiostoma.floridae.CDK1 ---------- - -----K----  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - -----M----  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - -----D----  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD PTSTSKIPLT N PQSKRN---- Site 2487
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - -----S----  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - -----P----  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - -----P----  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - -----D----  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - -----K----  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - -----D----  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - -----D----  
Lachancea.thermotolerans.SKY1 --GLEGVALS E RKLYQS---- Site 2504
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - -----F----  
Dictyostelium.discoideum.CDK1 ---------- - -----T----  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - -----D----  
Xenopus.tropicalis.IME2 ---------- - -----R----  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U IVPQAPAAQP L QIQSGV---- Site 2288
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - -----K----  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - -----R----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----PQ----  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -----S----  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - -----N----  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - -----D----  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - -----D----  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - -----Q----  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - -----L----  
Encephalitozoon.cuniculi.CDK1 ---------- - -----L----  
Saccharomyces.kluyveri.IME2 ---------- - -----V----  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - -----D----  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -----S----  
Cryptococcus.neoformans.IME2 ---------- - -----P----  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ---------- - -----T----  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom VRMDNAVPIV P QAPAAQ---- Site 2280
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - -----M----  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - -----L----  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - -----E----  
Gallus.gallus.CDK2 ---------- - -----R----  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - -----K----  
Homo.sapiens.CDK1 ---------- - -----N----  
Candida.albicans.CDK1 ---------- - -----D----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - -----K----  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - -----D----  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---------- - -----A----  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - -----K----  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - -----G----  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - -----P----  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - -----D----  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - -----E----  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - -----G----  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - -----M----  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei FQGLQASPSK H AGYSVR---- Site 2265
Acyrthosiphon.pisum.CDK1 ---------- - -----L----  
Candida.tropicalis.CDK1 ---------- - -----K----  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - -----Q----  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - -----Q----  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - -----K----  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - -----E----  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - -----A----  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - -----P----  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - -----D----  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - -----K----  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - -----E----  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - -----D----  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - -----D----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - -----Y----  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - -----K----  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U WSNGTQPILV P AWQQMT---- Site 2283
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - -----L----  
Candida.dubliniensis.IME2 ---------- - -----A----  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - -----D----  
Aspergillus.niger.IME2 ---------- - -----D----  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - -----D----  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d KLNFSRSDRK E FHFPEL---- Site 2724
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - -----P----  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - -----K----  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - -----D----  
Gallus.gallus.CDK1 ---------- - -----K----  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - -----P----  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - -----D----  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - -----N----  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - -----D----  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 ---------- - ----------  
Debaryomyces.hansenii.SKY1 ---------G L ENVVLE---- Site 2241
Saccharomyces.cerevisiae.IME2 ---------- - -----A----  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - -----K----  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - -----K----  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - -----F----  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - -----R----  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - -----R----  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - -----D----  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de LNFPKCDRKE F HFPELP---- Site 2731
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - -----D----  
Candida.albicans.IME2 ---------- - -----T----  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - -----Q----  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - -----Q----  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - -----D----  
Kluyveromyces.lactis.IME2 ---------- - -----M----  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - -----D----  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- - -----D----  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - -----D----  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - -----D----  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - -----E----  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----SG----  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - -----L----  
Neurospora.crassa.IME2 ---------- - -----D----  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - -----S----  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - -----A----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - -----S----  
Hydra.magnipapillata.CDK1 ---------- - -----H----  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - -----L----  
Ashbya.gossypii.IME2 INNYLNRNNN S GTQHGP---- Site 2409
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - -----H----  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - -----L----  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - -----N----  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - -----D----  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom QAPAVQPLQI R PGVLSQ---- Site 2291
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - -----A----  
Saccoglossus.kowalevskii.CDK1 ---------- - -----V----  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - -----D----  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - -----S----  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----PS----  
Yarrowia.lipolytica.IME2 NKSHLSGVNG S TKRNSL---- Site 2298
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - -----I----  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - -----M----  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - -----D----  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - -----D----  
Species Residue at Site 3627
in 'msaprobs'
muscle

The residue for every species at site 3627 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - -----E----  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - ----------  
Scheffersomyces.stipitis.SKY1 ---------G L ENVVLE---- Site 2241
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - -----P----  

Generated by PhyloBot at 10:50, October 23rd 2020
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