cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3626 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3626 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3626 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3626 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - ------E---  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ------M---  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ------D---  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ------P---  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ------G---  
Candida.guilliermondii.IME2 ---------- - ----------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ------E---  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - ------D---  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ------L---  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ------D---  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ------A---  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ------D---  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ------P---  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ------K---  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ------A---  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ------N---  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PVRMDNAVPI V PQAPAAQ--- Site 2279
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ------E---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ------A---  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ------K---  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ------D---  
Strongylocentrotus.purpuratus.CDK1 ---------- - ------M---  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ------S---  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ------Q---  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ------E---  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - ------P---  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- - ------D---  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 AIPPLTHNLS A VAPSINS--- Site 2695
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- - ------D---  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ------D---  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - ----------  
Bombus.terrestris.CDK1 ---------- - ------L---  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar EKNILQANKK K REFSKTD--- Site 2709
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - ------D---  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- - ----LSKMAP  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ------A---  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ------E---  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ------D---  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - ----------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ------A---  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ------E---  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei RTQQMLVPAW Q QVTPLAP--- Site 2286
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - ------L---  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ------G---  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ------T---  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - ------L---  
Naegleria.gruberi.LF4 ---------- - ------A---  
Saccharomyces.bayanus.IME2 ---------- - ------A---  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ------K---  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ------E---  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ------K---  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ------D---  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ------C---  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ------Q---  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ------K---  
Aspergillus.nidulans.IME2 ---------- - ------D---  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - ------L---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ------K---  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- - ------D---  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ------D---  
Penicillium.marneffei.IME2 ---------- - ------D---  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ------D---  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - ------C---  
Drosophila.melanogaster.MAK ---------- - ------R---  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- - ------LSKM  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ------L---  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ------L---  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- - ------D---  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - ------D---  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ------K---  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ------L---  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - ------C---  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ------D---  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ------K---  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - ------C---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ------E---  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ------K---  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ------K---  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ------D---  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ------D---  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ------E---  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ------D---  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - ------D---  
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ------G---  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ------D---  
Debaryomyces.hansenii.IME2 SKTEFQIHDD F DDGYEKE--- Site 2477
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ------D---  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - ------P---  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ------T---  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ------N---  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ------L---  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ------K---  
Monosiga.brevicollis.CDK1 ---------- - ------K---  
Saccharomyces.cerevisiae.SKY1 ---GMEEIRV P DRELYGS--- Site 2503
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ------D---  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - ------M---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ------C---  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d EYPKADVRLP E LNYNHLP--- Site 2702
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ------F---  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - ------D---  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ------R---  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ------L---  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - ------D---  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ------D---  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- - ------D---  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 TITTITTTPA K LLNSLSN--- Site 2453
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ------D---  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ------G---  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ------Y---  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - ------L---  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ------E---  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - ------R---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ------T---  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ------G---  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ------G---  
Salmo.salar.CDK1 ---------- - ------M---  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ------A---  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ------L---  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ------H---  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - ------D---  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ------L---  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ------P---  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ------D---  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - ------L---  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PPGFQGLQAS P SKHAGYS--- Site 2262
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ------D---  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ------P---  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ------L---  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ------E---  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ------D---  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ------E---  
Candida.glabrata.IME2 LHQCNRINEE I QNELSKP--- Site 2499
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ------D---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ------N---  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ------D---  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ------E---  
Branchiostoma.floridae.CDK1 ---------- - ------K---  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ------M---  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - ------D---  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD FPTSTSKIPL T NPQSKRN--- Site 2486
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ------S---  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ------P---  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ------P---  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ------D---  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ------K---  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - ------D---  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ------D---  
Lachancea.thermotolerans.SKY1 ---GLEGVAL S ERKLYQS--- Site 2503
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - ------F---  
Dictyostelium.discoideum.CDK1 ---------- - ------T---  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ------D---  
Xenopus.tropicalis.IME2 ---------- - ------R---  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PIVPQAPAAQ P LQIQSGV--- Site 2287
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ------K---  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ------R---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - -----PQ---  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ------S---  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ------N---  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ------D---  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - ------D---  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - ------Q---  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ------L---  
Encephalitozoon.cuniculi.CDK1 ---------- - ------L---  
Saccharomyces.kluyveri.IME2 ---------- - ------V---  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ------D---  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ------S---  
Cryptococcus.neoformans.IME2 ---------- - ------P---  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ---------- - ------T---  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PVRMDNAVPI V PQAPAAQ--- Site 2279
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - ------M---  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ------L---  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ------E---  
Gallus.gallus.CDK2 ---------- - ------R---  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ------K---  
Homo.sapiens.CDK1 ---------- - ------N---  
Candida.albicans.CDK1 ---------- - ------D---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ------K---  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - ------D---  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---------- - ------A---  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ------K---  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ------G---  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ------P---  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ------D---  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ------E---  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ------G---  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ------M---  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei GFQGLQASPS K HAGYSVR--- Site 2264
Acyrthosiphon.pisum.CDK1 ---------- - ------L---  
Candida.tropicalis.CDK1 ---------- - ------K---  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ------Q---  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - ------Q---  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ------K---  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ------E---  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ------A---  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ------P---  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ------D---  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - ------K---  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - ------E---  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - ------D---  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ------D---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - ------Y---  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ------K---  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U AWSNGTQPIL V PAWQQMT--- Site 2282
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - ------L---  
Candida.dubliniensis.IME2 ---------- - ------A---  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - ------D---  
Aspergillus.niger.IME2 ---------- - ------D---  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ------D---  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d RKLNFSRSDR K EFHFPEL--- Site 2723
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ------P---  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ------K---  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ------D---  
Gallus.gallus.CDK1 ---------- - ------K---  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ------P---  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - ------D---  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ------N---  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ------D---  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 ---------- - ----------  
Debaryomyces.hansenii.SKY1 ---------- G LENVVLE--- Site 2240
Saccharomyces.cerevisiae.IME2 ---------- - ------A---  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ------K---  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ------K---  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - ------F---  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ------R---  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ------R---  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ------D---  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de KLNFPKCDRK E FHFPELP--- Site 2730
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ------D---  
Candida.albicans.IME2 ---------- - ------T---  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ------Q---  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ------Q---  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ------D---  
Kluyveromyces.lactis.IME2 ---------- - ------M---  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - ------D---  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- - ------D---  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ------D---  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ------D---  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ------E---  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - -----SG---  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - ------L---  
Neurospora.crassa.IME2 ---------- - ------D---  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ------S---  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ------A---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ------S---  
Hydra.magnipapillata.CDK1 ---------- - ------H---  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ------L---  
Ashbya.gossypii.IME2 NINNYLNRNN N SGTQHGP--- Site 2408
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ------H---  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ------L---  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ------N---  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ------D---  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom TQAPAVQPLQ I RPGVLSQ--- Site 2290
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ------A---  
Saccoglossus.kowalevskii.CDK1 ---------- - ------V---  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ------D---  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ------S---  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - -----PS---  
Yarrowia.lipolytica.IME2 MNKSHLSGVN G STKRNSL--- Site 2297
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - ------I---  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ------M---  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - ------D---  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - ------D---  
Species Residue at Site 3626
in 'msaprobs'
muscle

The residue for every species at site 3626 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ------E---  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - ----------  
Scheffersomyces.stipitis.SKY1 ---------- G LENVVLE--- Site 2240
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ------P---  

Generated by PhyloBot at 20:38, October 19th 2020
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