cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3623 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3623 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3623 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3623 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - ---------E  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ---------M  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ---------D  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ---------P  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ---------G  
Candida.guilliermondii.IME2 ---------- - ----------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ---------E  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - ---------D  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ---------L  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ---------D  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ---------A  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ---------D  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ---------P  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ---------K  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ---------A  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ---------N  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei SGFPVRMDNA V PIVPQAPAAQ Site 2276
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ---------E  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ---------A  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ---------K  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ---------D  
Strongylocentrotus.purpuratus.CDK1 ---------- - ---------M  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ---------S  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ---------Q  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ---------E  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - ---------P  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- - ---------D  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 PSVAIPPLTH N LSAVAPSINS Site 2692
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- - ---------D  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ---------D  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - ----------  
Bombus.terrestris.CDK1 ---------- - ---------L  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar VSNEKNILQA N KKKREFSKTD Site 2706
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - ---------D  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- - -------LSK  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ---------A  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ---------E  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ---------D  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - ----------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ---------A  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ---------E  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei WSGRTQQMLV P AWQQVTPLAP Site 2283
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - ---------L  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ---------G  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ---------T  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - ---------L  
Naegleria.gruberi.LF4 ---------- - ---------A  
Saccharomyces.bayanus.IME2 ---------- - ---------A  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ---------K  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ---------E  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ---------K  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ---------D  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ---------C  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ---------Q  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ---------K  
Aspergillus.nidulans.IME2 ---------- - ---------D  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - ---------L  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ---------K  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- - ---------D  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - ---------D  
Penicillium.marneffei.IME2 ---------- - ---------D  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ---------D  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - ---------C  
Drosophila.melanogaster.MAK ---------- - ---------R  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- - ---------L  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ---------L  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ---------L  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- - ---------D  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - ---------D  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ---------K  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ---------L  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - ---------C  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ---------D  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ---------K  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - ---------C  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ---------E  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ---------K  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ---------K  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ---------D  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ---------D  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ---------E  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ---------D  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - ---------D  
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ---------G  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ---------D  
Debaryomyces.hansenii.IME2 NAISKTEFQI H DDFDDGYEKE Site 2474
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ---------D  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - ---------P  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ---------T  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ---------N  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ---------L  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ---------K  
Monosiga.brevicollis.CDK1 ---------- - ---------K  
Saccharomyces.cerevisiae.SKY1 ------GMEE I RVPDRELYGS Site 2500
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ---------D  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - ---------M  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ---------C  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d KRKEYPKADV R LPELNYNHLP Site 2699
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ---------F  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - ---------D  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ---------R  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ---------L  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - ---------D  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ---------D  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- - ---------D  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 TSSTITTITT T PAKLLNSLSN Site 2450
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ---------D  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ---------G  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ---------Y  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - ---------L  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ---------E  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - ---------R  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ---------T  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ---------G  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ---------G  
Salmo.salar.CDK1 ---------- - ---------M  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ---------A  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ---------L  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ---------H  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - ---------D  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ---------L  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ---------P  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ---------D  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - ---------L  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma IVCPPGFQGL Q ASPSKHAGYS Site 2259
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ---------D  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ---------P  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ---------L  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ---------E  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ---------D  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ---------E  
Candida.glabrata.IME2 SGQLHQCNRI N EEIQNELSKP Site 2496
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ---------D  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ---------N  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ---------D  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ---------E  
Branchiostoma.floridae.CDK1 ---------- - ---------K  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ---------M  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - ---------D  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD DLKFPTSTSK I PLTNPQSKRN Site 2483
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ---------S  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ---------P  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ---------P  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ---------D  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ---------K  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - ---------D  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ---------D  
Lachancea.thermotolerans.SKY1 ------GLEG V ALSERKLYQS Site 2500
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - ---------F  
Dictyostelium.discoideum.CDK1 ---------- - ---------T  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ---------D  
Xenopus.tropicalis.IME2 ---------- - ---------R  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U NSVPIVPQAP A AQPLQIQSGV Site 2284
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ---------K  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ---------R  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - --------PQ  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ---------S  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ---------N  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ---------D  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - ---------D  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - ---------Q  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ---------L  
Encephalitozoon.cuniculi.CDK1 ---------- - ---------L  
Saccharomyces.kluyveri.IME2 ---------- - ---------V  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ---------D  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ---------S  
Cryptococcus.neoformans.IME2 ---------- - ---------P  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ---------- - ---------T  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom SGFPVRMDNA V PIVPQAPAAQ Site 2276
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - ---------M  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ---------L  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ---------E  
Gallus.gallus.CDK2 ---------- - ---------R  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ---------K  
Homo.sapiens.CDK1 ---------- - ---------N  
Candida.albicans.CDK1 ---------- - ---------D  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ---------K  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - ---------D  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---------- - ---------A  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ---------K  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ---------G  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ---------P  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ---------D  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ---------E  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ---------G  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ---------M  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei CPPGFQGLQA S PSKHAGYSVR Site 2261
Acyrthosiphon.pisum.CDK1 ---------- - ---------L  
Candida.tropicalis.CDK1 ---------- - ---------K  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ---------Q  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - ---------Q  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ---------K  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ---------E  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ---------A  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ---------P  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ---------D  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - ---------K  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - ---------E  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - ---------D  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ---------D  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - ---------Y  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ---------K  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U LTQAWSNGTQ P ILVPAWQQMT Site 2279
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - ---------L  
Candida.dubliniensis.IME2 ---------- - ---------A  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - ---------D  
Aspergillus.niger.IME2 ---------- - ---------D  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ---------D  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ENKRKLNFSR S DRKEFHFPEL Site 2720
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ---------P  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ---------K  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ---------D  
Gallus.gallus.CDK1 ---------- - ---------K  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ---------P  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - ---------D  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ---------N  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ---------D  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 ---------- - ----------  
Debaryomyces.hansenii.SKY1 ---------- - --GLENVVLE  
Saccharomyces.cerevisiae.IME2 ---------- - ---------A  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ---------K  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ---------K  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - ---------F  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ---------R  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ---------R  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ---------D  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de NKRKLNFPKC D RKEFHFPELP Site 2727
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ---------D  
Candida.albicans.IME2 ---------- - ---------T  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ---------Q  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ---------Q  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ---------D  
Kluyveromyces.lactis.IME2 ---------- - ---------M  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - ---------D  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- - ---------D  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ---------D  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ---------D  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ---------E  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - --------SG  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - ---------L  
Neurospora.crassa.IME2 ---------- - ---------D  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ---------S  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ---------A  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ---------S  
Hydra.magnipapillata.CDK1 ---------- - ---------H  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ---------L  
Ashbya.gossypii.IME2 SNHNINNYLN R NNNSGTQHGP Site 2405
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ---------H  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ---------L  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ---------N  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ---------D  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom PLVTQAPAVQ P LQIRPGVLSQ Site 2287
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ---------A  
Saccoglossus.kowalevskii.CDK1 ---------- - ---------V  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ---------D  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ---------S  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - --------PS  
Yarrowia.lipolytica.IME2 GLQMNKSHLS G VNGSTKRNSL Site 2294
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - ---------I  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ---------M  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - ---------D  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - ---------D  
Species Residue at Site 3623
in 'msaprobs'
muscle

The residue for every species at site 3623 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ---------E  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - ----------  
Scheffersomyces.stipitis.SKY1 ---------- - --GLENVVLE  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ---------P  

Generated by PhyloBot at 01:09, December 7th 2019
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