cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3396 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3396 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3396 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3396 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- E ---------- Site 2239
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- P ---------- Site 2239
Danio.rerio.CDK1 ---------- T ---------- Site 2239
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- H ---------- Site 2239
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- C ---------- Site 2241
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- N ---------- Site 2522
Candida.guilliermondii.IME2 ---------- P ---------- Site 2237
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- R ---------- Site 2196
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- R ---------- Site 2239
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- P ---------- Site 2239
Schizosaccharomyces.octosporus.b.IME2 ---------- P ---------- Site 2239
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- H ---------- Site 2239
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- R ---------- Site 2519
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- Y ---------- Site 2234
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- T ---------- Site 2515
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- K ---------- Site 2239
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- R ---------- Site 2239
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- R ---------- Site 2239
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - ----------  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- R ---------- Site 2239
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- V ---------- Site 2239
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- V ---------- Site 2239
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- Y ---------- Site 2239
Strongylocentrotus.purpuratus.CDK1 ---------- K ---------- Site 2196
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- Q ---------- Site 2523
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- T ---------- Site 2511
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- G ---------- Site 2239
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- P ---------- Site 2239
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- Y ---------- Site 2234
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- G ---------- Site 2186
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- Y ---------- Site 2234
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- R ---------- Site 2239
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- R ---------- Site 2239
Bombus.terrestris.CDK1 ---------- T ---------- Site 2239
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- G ---------- Site 2194
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- Y ---------- Site 2234
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- E ---------- Site 2236
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- R ---------- Site 2196
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- R ---------- Site 2239
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- H ---------- Site 2239
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- H ---------- Site 2105
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- R ---------- Site 2519
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- R ---------- Site 2239
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- R ---------- Site 2239
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- H ---------- Site 2105
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- P ---------- Site 2239
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- R ---------- Site 2099
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- R ---------- Site 2239
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- P ---------- Site 2239
Naegleria.gruberi.LF4 ---------- Y ---------- Site 2196
Saccharomyces.bayanus.IME2 ---------- V ---------- Site 2228
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- V ---------- Site 2239
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- R ---------- Site 2196
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- V ---------- Site 2239
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- E ---------- Site 2239
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- A ---------- Site 2196
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- L ---------- Site 2239
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- R ---------- Site 2090
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- H ---------- Site 2196
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- P ---------- Site 2239
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- R ---------- Site 2239
Aspergillus.nidulans.IME2 ---------- V ---------- Site 2239
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- R ---------- Site 2239
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- Q ---------- Site 2177
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- T ---------- Site 2239
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- Y ---------- Site 2234
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- R ---------- Site 2239
Penicillium.marneffei.IME2 ---------- V ---------- Site 2185
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- H ---------- Site 2239
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- S ---------- Site 2235
Drosophila.melanogaster.MAK ---------- K ---------- Site 2196
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- E ---------- Site 2236
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- P ---------- Site 2196
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- P ---------- Site 2237
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- Y ---------- Site 2234
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- Y ---------- Site 2234
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- K ---------- Site 2525
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- K ---------- Site 2239
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- R ---------- Site 2239
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- Y ---------- Site 2234
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- V ---------- Site 2239
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- N ---------- Site 2239
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- S ---------- Site 2235
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- G ---------- Site 2239
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- V ---------- Site 2239
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- P ---------- Site 2239
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- H ---------- Site 2239
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- A ---------- Site 2238
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- V ---------- Site 2239
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- R ---------- Site 2239
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- R ---------- Site 2196
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- P ---------- Site 2239
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- Y ---------- Site 2234
Debaryomyces.hansenii.IME2 ---------- S ---------- Site 2190
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- R ---------- Site 2239
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- D ---------- Site 2239
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- E ---------- Site 2239
Caenorhabditis.briggsae.CDK1 ---------- D ---------- Site 2513
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- V ---------- Site 2239
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- P ---------- Site 2237
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- T ---------- Site 2239
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- E ---------- Site 2239
Monosiga.brevicollis.CDK1 ---------- D ---------- Site 2239
Saccharomyces.cerevisiae.SKY1 ---------- L ---------- Site 2239
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- H ---------- Site 2239
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- G ---------- Site 2239
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- R ---------- Site 2196
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- H ---------- Site 2239
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d VKGSKIDVEK M ---------- Site 2434
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- P ---------- Site 2239
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- R ---------- Site 2115
Ajellomyces.capsulatus.CDK1 ---------- S ---------- Site 2516
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- H ---------- Site 2239
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- E ---------- Site 2239
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- P ---------- Site 2237
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- Y ---------- Site 2234
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- R ---------- Site 2239
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- P ---------- Site 2242
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- R ---------- Site 2239
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- Y ---------- Site 2234
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 ---------- V ---------- Site 2239
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- H ---------- Site 2239
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- K ---------- Site 2239
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- R ---------- Site 2090
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- V ---------- Site 2239
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- Q ---------- Site 2137
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- K ---------- Site 2421
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- H ---------- Site 2105
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- R ---------- Site 2239
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- R ---------- Site 2230
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- D ---------- Site 2513
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- E ---------- Site 2239
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- G ---------- Site 2239
Salmo.salar.CDK1 ---------- T ---------- Site 2239
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- P ---------- Site 2239
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- P ---------- Site 2237
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- T ---------- Site 2239
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- R ---------- Site 2239
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- V ---------- Site 2196
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- P ---------- Site 2240
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- N ---------- Site 2239
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- R ---------- Site 2239
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- R ---------- Site 2239
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- H ---------- Site 2105
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- Y ---------- Site 2239
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- G ---------- Site 2239
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- P ---------- Site 2237
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- R ---------- Site 2239
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- Y ---------- Site 2234
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- R ---------- Site 2196
Candida.glabrata.IME2 ---------- V ---------- Site 2150
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- Q ---------- Site 2167
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- H ---------- Site 2239
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- S ---------- Site 2241
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- Q ---------- Site 2237
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- G ---------- Site 2239
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- Q ---------- Site 2239
Branchiostoma.floridae.CDK1 ---------- R ---------- Site 2520
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- E ---------- Site 2239
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- R ---------- Site 2239
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- R ---------- Site 2239
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- H ---------- Site 2173
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- T ---------- Site 2515
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- A ---------- Site 2226
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- T ---------- Site 2239
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- H ---------- Site 2156
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- H ---------- Site 2239
Lachancea.thermotolerans.SKY1 ---------- V ---------- Site 2239
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- S ---------- Site 2235
Dictyostelium.discoideum.CDK1 ---------- D ---------- Site 2239
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- R ---------- Site 2239
Xenopus.tropicalis.IME2 ---------- S ---------- Site 2239
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- H ---------- Site 2105
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- V ---------- Site 2239
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- S ---------- Site 2239
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- S ---------- Site 2239
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- P ---------- Site 2239
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- H ---------- Site 2196
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- A ---------- Site 2239
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- R ---------- Site 2239
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- R ---------- Site 2196
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- P ---------- Site 2239
Encephalitozoon.cuniculi.CDK1 ---------- P ---------- Site 2239
Saccharomyces.kluyveri.IME2 ---------- I ---------- Site 2196
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- K ---------- Site 2527
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- Y ---------- Site 2239
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- P ---------- Site 2239
Cryptococcus.neoformans.IME2 ---------- L ---------- Site 2141
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- Q ---------- Site 2237
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ---------- N ---------- Site 2239
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - ----------  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- P ---------- Site 2196
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- P ---------- Site 2239
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- R ---------- Site 2239
Gallus.gallus.CDK2 ---------- T ---------- Site 2239
Emericella.nidulans.CDK1 ---------- S ---------- Site 2515
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- R ---------- Site 2239
Homo.sapiens.CDK1 ---------- D ---------- Site 2239
Candida.albicans.CDK1 ---------- D ---------- Site 2239
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- V ---------- Site 2239
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- H ---------- Site 2156
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- H ---------- Site 2170
Saccharomyces.castelli.IME2 ---------- V ---------- Site 2239
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- R ---------- Site 2239
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- P ---------- Site 2239
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- P ---------- Site 2239
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- R ---------- Site 2239
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- N ---------- Site 2239
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- P ---------- Site 2239
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- P ---------- Site 2239
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- H ---------- Site 2105
Acyrthosiphon.pisum.CDK1 ---------- R ---------- Site 2196
Candida.tropicalis.CDK1 ---------- I ---------- Site 2239
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- P ---------- Site 2239
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- R ---------- Site 2196
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- V ---------- Site 2239
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- G ---------- Site 2239
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- R ---------- Site 2519
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- G ---------- Site 2239
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- R ---------- Site 2239
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- P ---------- Site 2239
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- R ---------- Site 2239
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- R ---------- Site 2196
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- R ---------- Site 2196
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- P ---------- Site 2237
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- V ---------- Site 2239
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - ----------  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- P ---------- Site 2239
Candida.dubliniensis.IME2 ---------- I ---------- Site 2239
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- Y ---------- Site 2234
Aspergillus.niger.IME2 ---------- I ---------- Site 2237
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- H ---------- Site 2239
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- G FIEKFMPELK Site 2186
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- P ---------- Site 2239
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- V ---------- Site 2239
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- F ---------- Site 2234
Gallus.gallus.CDK1 ---------- D ---------- Site 2517
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- C ---------- Site 2241
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- R ---------- Site 2239
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- P ---------- Site 2514
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- R ---------- Site 2239
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- H ---------- Site 2239
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- F ---------- Site 2242
Kluyveromyces.waltii.IME2 ---------- G ---------- Site 2239
Debaryomyces.hansenii.SKY1 ---------- L ---------- Site 2239
Saccharomyces.cerevisiae.IME2 ---------- V ---------- Site 2224
Schizosaccharomyces.japonicus.b.IME2 ARYTSLSERT L ---------- Site 2271
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- Q ---------- Site 2239
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- V ---------- Site 2239
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- S ---------- Site 2235
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- E ---------- Site 2239
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- K ---------- Site 2239
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- H ---------- Site 2239
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -------GFI E KFIPELRAKL Site 2233
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- Y ---------- Site 2234
Candida.albicans.IME2 ---------- I ---------- Site 2239
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- P ---------- Site 2239
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- P ---------- Site 2239
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- H ---------- Site 2235
Kluyveromyces.lactis.IME2 ---------- V ---------- Site 2137
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- H ---------- Site 2158
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- Y ---------- Site 2234
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- H ---------- Site 2239
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- H ---------- Site 2239
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- Q ---------- Site 2239
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- N ---------- Site 2514
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- P ---------- Site 2239
Neurospora.crassa.IME2 ---------- V ---------- Site 2196
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- S ---------- Site 2239
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- I ---------- Site 2520
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- E ---------- Site 2239
Hydra.magnipapillata.CDK1 ---------- N ---------- Site 2239
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- P ---------- Site 2237
Ashbya.gossypii.IME2 ---------- I ---------- Site 2196
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- P ---------- Site 2239
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- V ---------- Site 2239
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- K ---------- Site 2239
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- H ---------- Site 2239
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- Y ---------- Site 2239
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - ----------  
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- G ---------- Site 2511
Saccoglossus.kowalevskii.CDK1 ---------- Q ---------- Site 2239
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- Y ---------- Site 2234
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- H ---------- Site 2239
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- F ---------- Site 1923
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- E ---------- Site 2239
Yarrowia.lipolytica.IME2 ---------- S ---------- Site 2176
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- D ---------- Site 2239
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- T ---------- Site 2239
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- N ---------- Site 2239
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- R ---------- Site 2239
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- R ---------- Site 2239
Species Residue at Site 3396
in 'msaprobs'
muscle

The residue for every species at site 3396 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- E ---------- Site 2235
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- R ---------- Site 2239
Scheffersomyces.stipitis.SKY1 ---------- L ---------- Site 2239
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- C ---------- Site 2241

Generated by PhyloBot at 02:39, October 16th 2019
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