cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 3321 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3321 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3321 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3321 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -DF--F---V A K--------- Site 2237
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -TW--L---K D V--------- Site 2237
Danio.rerio.CDK1 -RF--F---R D V--------- Site 2237
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -PY--L---T S L--------- Site 2237
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -PY--F---A D F--------- Site 2239
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -QY--F---T M L--------- Site 2520
Candida.guilliermondii.IME2 -SY--F---M Y T--------- Site 2235
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -RVNPSPGEA - ----------  
Chlamydomonas.reinhardtii.LF4 -PY--F---R D L--------- Site 2194
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -PF--F---D E L--------- Site 2237
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -QYDYIYDWT - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -NGQTNKYPY - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -PY--F---L E D--------- Site 2237
Schizosaccharomyces.octosporus.b.IME2 -KY--F---P K P--------- Site 2237
Candida.albicans.MAPK3..Extracellular.signal.regul -PY--L---Q L Y--------- Site 2237
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -PY--F---A Q V--------- Site 2517
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -EGGVDTLKD - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. -PY--V---S I W--------- Site 2232
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -PF--F---A G L--------- Site 2513
Aedes.aegypti.CDK1 -KY--F---- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -PF--F---Y P L--------- Site 2237
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -PF--F---A R L--------- Site 2237
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -AW--I---H Q S--------- Site 2237
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -QF--V---T M T--------- Site 2103
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -PY--F---D S V--------- Site 2237
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -KF--F---E D F--------- Site 2237
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -PY--F---Y P V--------- Site 2237
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -PY--L---E Q Y--------- Site 2237
Strongylocentrotus.purpuratus.CDK1 -PY--F---K D V--------- Site 2194
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -NVLLQSTSL - ----------  
Drosophila.melanogaster.CDK1 -PY--F---N G F--------- Site 2521
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -NSNTRVNSQ - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -DSDQSPQQT - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -PW--M---N V T--------- Site 2509
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -SY--F---R S L--------- Site 2237
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -EY--F---G D L--------- Site 2237
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -PY--I---N V W--------- Site 2232
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -DF--F---Q M D--------- Site 2184
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -PY--I---N V W--------- Site 2232
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -PF--F---E P F--------- Site 2237
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -PY--L---D E G--------- Site 2237
Bombus.terrestris.CDK1 -PY--F---T G V--------- Site 2237
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -PW--L---N - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -DF--F---N K D--------- Site 2192
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -PY--I---N V W--------- Site 2232
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -DF--L---K D V--------- Site 2234
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -PY--F---Q V Q--------- Site 2194
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -PF--F---N E L--------- Site 2237
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -PY--F---D E L--------- Site 2237
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -QYDYIYDWT - ----------  
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -TGDVSRGVI - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -SF--T---R L T--------- Site 2103
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -AY--F---A Q V--------- Site 2517
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -PY--L---D E G--------- Site 2237
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -PY--F---E N I--------- Site 2237
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -PF--V---N M K--------- Site 2103
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -EY--F---R E T--------- Site 2237
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -PV--F---Q G L--------- Site 2097
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -PF--F---A C L--------- Site 2237
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -EY--F---R E T--------- Site 2237
Naegleria.gruberi.LF4 -PY--F---K E L--------- Site 2194
Saccharomyces.bayanus.IME2 -PF--F---E N T--------- Site 2226
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -PY--F---Y P V--------- Site 2237
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -PF--F---S E F--------- Site 2194
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -PY--F---T S G--------- Site 2237
Dictyostelium.discoideum.DYRK1..Probable.serine.th -SF--F---L T D--------- Site 2237
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -GF--F---R R T--------- Site 2194
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -PW--L---R R R--------- Site 2237
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -PT--F---Q T Q--------- Site 2088
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -PY--V---Q R F--------- Site 2194
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -PY--L---Q L Q--------- Site 2237
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -AW--I---H E P--------- Site 2237
Aspergillus.nidulans.IME2 -EY--F---A D A--------- Site 2237
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -AF--F---K D M--------- Site 2240
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -RY--L---E E G--------- Site 2237
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -PY--F---Q V G--------- Site 2175
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -PF--F---Q D V--------- Site 2237
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -PY--I---N V W--------- Site 2232
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -PF--F---D E L--------- Site 2237
Penicillium.marneffei.IME2 -EY--F---A D A--------- Site 2183
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -PY--F---A Q Y--------- Site 2237
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -PY--M---S P Y--------- Site 2233
Drosophila.melanogaster.MAK -PY--F---H A L--------- Site 2194
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -PF--F---I K ---------- Site 2242
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -AF--I---Q E K--------- Site 2241
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -DF--L---K D V--------- Site 2234
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -PY--F---K E L--------- Site 2194
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -SY--F---K E K--------- Site 2235
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -PY--I---N V W--------- Site 2232
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -PY--I---T V W--------- Site 2232
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -PF--F---D L L--------- Site 2243
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -PF--F---K D M--------- Site 2240
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -QYDYIYDWT - ----------  
Candida.parapsilosis.IME2 -KY--F---S E ---------- Site 2088
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -VF--F---T S D--------- Site 2237
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -SF--F---D E L--------- Site 2237
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -PY--I---T V W--------- Site 2232
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -PY--F---Y T V--------- Site 2237
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -PF--F---D P L--------- Site 2237
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -PY--M---S P Y--------- Site 2233
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -PF--F---L S L--------- Site 2237
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -PY--F---Y T V--------- Site 2237
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -PY--F---T E A--------- Site 2237
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -PY--F---D E F--------- Site 2237
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -GF--F---R R T--------- Site 2236
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -EY--F---R P V--------- Site 2237
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -AF--F---D E L--------- Site 2237
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -PF--F---D E L--------- Site 2194
Candida.orthopsilosis.IME2 -EY--F---S K ---------- Site 2243
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -KY--F---S N R--------- Site 2237
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -EY--V---N V W--------- Site 2232
Debaryomyces.hansenii.IME2 -SY--F---K N T--------- Site 2188
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -PF--F---D E L--------- Site 2237
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -EY--F---T N N--------- Site 2237
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -RY--F---L H N--------- Site 2237
Caenorhabditis.briggsae.CDK1 -PY--F---N D I--------- Site 2511
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -PY--F---L P I--------- Site 2237
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -QY--F---F T A--------- Site 2235
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -PW--I---S K S--------- Site 2237
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -PY--F---H D L--------- Site 2237
Monosiga.brevicollis.CDK1 -PY--F---D D I--------- Site 2237
Saccharomyces.cerevisiae.SKY1 -PW--L---K D T--------- Site 2237
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -PY--L---Q L Y--------- Site 2237
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -DY--F---T A D--------- Site 2237
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -PF--F---D E L--------- Site 2194
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -EGFTYDFLF - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -PY--V---Q R F--------- Site 2237
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -DF--F---Q M DGFAERFSQE Site 2231
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -PF--F---Y E N--------- Site 2237
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -PT--F---Q T Q--------- Site 2113
Ajellomyces.capsulatus.CDK1 -PY--F---Q A G--------- Site 2514
Dictystelium.discoideum.MAPK3..Extracellular.signa -PY--F---Q S L--------- Site 2237
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -PY--F---Q D L--------- Site 2237
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -SY--F---K E K--------- Site 2235
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -PY--I---N V W--------- Site 2232
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -PF--F---E P F--------- Site 2237
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -DY--F---Q Q E--------- Site 2240
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -PY--L---E E G--------- Site 2237
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -PY--I---N V W--------- Site 2232
Saccharomyces.cerevisiae.CDK1 -PY--F---Q E S--------- Site 2242
Lodderomyces.elongisporus.IME2 -SY--F---K E S--------- Site 2237
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -PY--F---A Q Y--------- Site 2237
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -PF--F---S P F--------- Site 2237
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -PS--F---Q T Q--------- Site 2088
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -TY--F---T D I--------- Site 2237
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -PY--V---S R F--------- Site 2135
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -PF--F---D L L--------- Site 2419
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -PF--V---T M T--------- Site 2103
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -PY--F---D S I--------- Site 2237
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -SF--F---D E L--------- Site 2228
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -PY--F---D N M--------- Site 2511
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -SY--L---H K D--------- Site 2237
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -PW--F---Q E E--------- Site 2237
Salmo.salar.CDK1 -RF--F---R D V--------- Site 2237
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -RY--F---S N R--------- Site 2237
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -QY--F---F T A--------- Site 2235
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -PY--V---Q I Q--------- Site 2237
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -SF--F---D E L--------- Site 2237
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -TF--L---R G ---------- Site 1890
Aspergillus.fumigatus.IME2 -EY--F---A D A--------- Site 2194
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -PY--F---L E E--------- Site 2238
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -PF--F---L P L--------- Site 2237
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -PY--F---D Q F--------- Site 2237
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -PY--L---E E G--------- Site 2237
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -PF--V---T M T--------- Site 2103
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -PY--L---E Q Y--------- Site 2237
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -VY--F---R S L--------- Site 2237
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -SY--F---K E K--------- Site 2235
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -PY--F---D S L--------- Site 2237
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -EY--I---N V W--------- Site 2232
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -PF--F---S E T--------- Site 2194
Candida.glabrata.IME2 -PF--F---T N T--------- Site 2148
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -PY--F---Q V G--------- Site 2165
Schizosaccharomyces.pombe.IME2 -EF--C---R V S--------- Site 2234
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -PY--L---K L Y--------- Site 2237
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -PY--F---T D S--------- Site 2239
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -PF--V---S M Q--------- Site 2235
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -YTFDWTMLK - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -PY--F---Q S L--------- Site 2237
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -AY--F---E S F--------- Site 2237
Branchiostoma.floridae.CDK1 -VY--F---H D V--------- Site 2518
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -PF--F---D V L--------- Site 2237
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -PF--F---D E L--------- Site 2237
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD SEY--F---L N D--------- Site 2237
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -AF--F---D E L--------- Site 2237
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -PY--F---Q V G--------- Site 2171
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -PF--F---A G L--------- Site 2513
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -SF--F---K K T--------- Site 2224
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -PF--F---Q D V--------- Site 2237
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -PF--L---A K Y--------- Site 2154
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -AY--F---A Q Y--------- Site 2237
Lachancea.thermotolerans.SKY1 -PW--L---R D T--------- Site 2237
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -PY--M---S I Y--------- Site 2233
Dictyostelium.discoideum.CDK1 -PY--F---G D L--------- Site 2237
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -PY--F---E S L--------- Site 2237
Xenopus.tropicalis.IME2 -AF--F---R D V--------- Site 2237
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -PF--V---T M T--------- Site 2103
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -PY--F---Y P I--------- Site 2237
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -PF--F---R D V--------- Site 2237
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -QY--F---F R K--------- Site 2237
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -DY--F---S V L--------- Site 2237
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -PF--V---T Q F--------- Site 2194
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -SF--F---K K T--------- Site 2237
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -SF--F---D E L--------- Site 2237
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -PF--F---D E L--------- Site 2194
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -QY--F---K E A--------- Site 2237
Encephalitozoon.cuniculi.CDK1 -KY--F---E G M--------- Site 2237
Saccharomyces.kluyveri.IME2 -PY--F---K E T--------- Site 2194
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -PF--F---D L L--------- Site 2525
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -PY--L---E Q Y--------- Site 2237
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -DY--F---S A L--------- Site 2237
Cryptococcus.neoformans.IME2 -PY--F---H E T--------- Site 2139
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -PF--V---S M Q--------- Site 2235
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -PW--L---N - ----------  
Candida.lusitaniae.IME2 -TY--F---K E Y--------- Site 2237
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -QF--V---T M S--------- Site 2103
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -PY--F---S E D--------- Site 2194
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -PY--F---F T D--------- Site 2237
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -PY--F---D S C--------- Site 2237
Gallus.gallus.CDK2 -PF--F---R D V--------- Site 2237
Emericella.nidulans.CDK1 -PY--F---Q H G--------- Site 2513
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -PY--F---Q E Q--------- Site 2237
Homo.sapiens.CDK1 -PY--F---N D L--------- Site 2237
Candida.albicans.CDK1 -PY--F---N D N--------- Site 2237
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -SY--F---Y P I--------- Site 2237
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -PF--L---A K Y--------- Site 2154
Mus.musculus.ICK..Serine.threonine.protein.kinase. -PY--F---Q I G--------- Site 2168
Saccharomyces.castelli.IME2 -EY--F---K D T--------- Site 2237
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -PF--F---T C L--------- Site 2237
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -KY--F---S N R--------- Site 2237
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -EY--F---S D L--------- Site 2237
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -RY--F---D D L--------- Site 2237
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -PF--F---N E L--------- Site 2237
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -RY--F---S I R--------- Site 2237
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -DF--F---W S D--------- Site 2237
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -PF--V---T M T--------- Site 2103
Acyrthosiphon.pisum.CDK1 -DY--F---H S L--------- Site 2194
Candida.tropicalis.CDK1 -PY--F---K E T--------- Site 2237
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -QY--F---Q E E--------- Site 2237
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -AM--F---N E I--------- Site 2194
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -PY--F---Y P I--------- Site 2237
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -PF--F---L S L--------- Site 2237
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -AY--F---A Q V--------- Site 2517
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -VY--F---R S L--------- Site 2237
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -PY--F---D Q F--------- Site 2237
Candida.albicans.SSN3..Serine.threonine.protein.ki -PY--F---L E L--------- Site 2237
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -PY--F---R E I--------- Site 2237
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -QF--F---S E L--------- Site 2194
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -SY--F---D G L--------- Site 2194
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -EY--F---T T P--------- Site 2235
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -PY--F---Y P I--------- Site 2237
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -SF--I---T M K--------- Site 2103
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -EY--F---R E T--------- Site 2237
Candida.dubliniensis.IME2 -QY--F---K E S--------- Site 2237
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -PY--I---T V W--------- Site 2232
Aspergillus.niger.IME2 -EY--F---A D A--------- Site 2235
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -SY--F---A Q Y--------- Site 2237
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -EY--F---T R D--------- Site 2184
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -EY--F---S D L--------- Site 2237
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -PY--F---Y T V--------- Site 2237
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -TA--Y---N Q ---------- Site 2082
Schizosaccharomyces.japonicus.IME2 -PF--L---Y V P--------- Site 2228
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -PY--V---N V W--------- Site 2232
Gallus.gallus.CDK1 -PY--F---D D L--------- Site 2515
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -PY--F---S D F--------- Site 2239
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -PF--F---D E L--------- Site 2237
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -EF--L---K L K--------- Site 2512
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -AF--F---D E L--------- Site 2237
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -PY--F---E S L--------- Site 2237
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -KF--F---K T K--------- Site 2240
Kluyveromyces.waltii.IME2 -PY--F---A E T--------- Site 2237
Debaryomyces.hansenii.SKY1 -SW--L---S D A--------- Site 2237
Saccharomyces.cerevisiae.IME2 -PF--F---E N T--------- Site 2222
Schizosaccharomyces.japonicus.b.IME2 -RY--F---S N G--------- Site 2237
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -PY--F---H D L--------- Site 2237
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -PY--F---Y P V--------- Site 2237
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -PY--M---S I Y--------- Site 2233
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -PY--F---Q D L--------- Site 2237
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -SY--F---D E T--------- Site 2237
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -AY--F---E Q F--------- Site 2237
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -DY--F---T R D--------- Site 2228
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -PY--I---N V W--------- Site 2232
Candida.albicans.IME2 -QY--F---K E S--------- Site 2237
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -PF--F---A D D--------- Site 2237
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -PY--F---F E N--------- Site 2237
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -AY--F---A Q Y--------- Site 2233
Kluyveromyces.lactis.IME2 -PY--F---K E Y--------- Site 2135
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -PF--L---A K Y--------- Site 2156
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -PY--I---N V W--------- Site 2232
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -AY--F---S Q Y--------- Site 2237
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -QYDYIYDWT - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -AY--F---S Q Y--------- Site 2237
Amphimedon.queenslandica.CDK1 -PF--F---S E ---------- Site 2243
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -SY--F---D S F--------- Site 2237
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -QY--F---L C R--------- Site 2512
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -GF--F---K E L--------- Site 2237
Neurospora.crassa.IME2 -DY--F---T D A--------- Site 2194
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -PY--F---T D S--------- Site 2237
Dictyostelium.discoideum.DYRK2..Probable.serine.th -DW--I---I K V--------- Site 2518
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -SY--L---H K E--------- Site 2237
Hydra.magnipapillata.CDK1 -PY--F---D D L--------- Site 2237
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -SY--F---K E K--------- Site 2235
Ashbya.gossypii.IME2 -PY--F---A G T--------- Site 2194
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -PY--V---Q I Q--------- Site 2237
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -PW--I---S K S--------- Site 2237
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -PY--F---D E L--------- Site 2237
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -PY--V---S K F--------- Site 2237
Schizosaccharomyces.pombe.b.IME2 -VF--F---P L ---------- Site 2237
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -PY--L---E Q Y--------- Site 2237
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -PF--V---N M K--------- Site 2152
Schizosaccharomyces.pombe.CDK1 -NY--L---R D F--------- Site 2237
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -PF--F---E N G--------- Site 2509
Saccoglossus.kowalevskii.CDK1 -RY--F---R D V--------- Site 2237
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -RLHRGAPVN - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -PY--I---N V W--------- Site 2232
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -PY--F---S P G--------- Site 2237
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -TF--M---S N S--------- Site 1921
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -PY--F---S S P--------- Site 2237
Yarrowia.lipolytica.IME2 -RY--F---A Q E--------- Site 2174
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -KY--F---T E S--------- Site 2237
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -RF--F---R D V--------- Site 2237
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -LW--F---K E L--------- Site 2237
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -PF--F---D E L--------- Site 2237
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -PF--F---D E L--------- Site 2237
Species Residue at Site 3321
in 'msaprobs'
muscle

The residue for every species at site 3321 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -PF--L---K Q K--------- Site 2233
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -PY--L---D E G--------- Site 2237
Scheffersomyces.stipitis.SKY1 -PW--L---S D A--------- Site 2237
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -PY--F---S D F--------- Site 2239

Generated by PhyloBot at 23:22, May 31st 2020
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