cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 3320 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3320 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3320 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3320 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 L-DF--F--- V AK-------- Site 2087
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD H-TW--L--- K DV-------- Site 2087
Danio.rerio.CDK1 H-RF--F--- R DV-------- Site 2087
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge H-PY--L--- T SL-------- Site 2087
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d H-PY--F--- A DF-------- Site 2087
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK H-QY--F--- T ML-------- Site 2087
Candida.guilliermondii.IME2 Q-SY--F--- M YT-------- Site 2087
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ Q-RVNPSPGE A ---------- Site 2697
Chlamydomonas.reinhardtii.LF4 H-PY--F--- R DL-------- Site 2087
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g H-PF--F--- D EL-------- Site 2087
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 H-QYDYIYDW T ---------- Site 2048
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 A-NGQTNKYP Y ---------- Site 2702
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho D-PY--F--- L ED-------- Site 2087
Schizosaccharomyces.octosporus.b.IME2 E-KY--F--- P KP-------- Site 2087
Candida.albicans.MAPK3..Extracellular.signal.regul H-PY--L--- Q LY-------- Site 2087
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. H-PY--F--- A QV-------- Site 2087
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 G-EGGVDTLK D ---------- Site 2494
Suberites.domuncula.JNK..Stress.activated.protein. H-PY--V--- S IW-------- Site 2087
Homo.sapiens.CLK3..Dual.specificity.protein.kinase H-PF--F--- A GL-------- Site 2087
Aedes.aegypti.CDK1 H-KY--F--- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci H-PF--F--- Y PL-------- Site 2087
Homo.sapiens.CLK2..Dual.specificity.protein.kinase H-PF--F--- A RL-------- Site 2087
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos H-AW--I--- H QS-------- Site 2087
Homo.sapiens.HIPK1..Homeodomain.interacting.protei H-QF--V--- T MT-------- Site 2087
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar H-PY--F--- D SV-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 H-KF--F--- E DF-------- Site 2087
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. H-PY--F--- Y PV-------- Site 2087
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM H-PY--L--- E QY-------- Site 2087
Strongylocentrotus.purpuratus.CDK1 H-PY--F--- K DV-------- Site 2087
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca N-NVLLQSTS L ---------- Site 2494
Drosophila.melanogaster.CDK1 H-PY--F--- N GF-------- Site 2087
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 S-NSNTRVNS Q ---------- Site 2707
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. V-DSDQSPQQ T ---------- Site 2522
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH H-PW--M--- N VT-------- Site 2087
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d H-SY--F--- R SL-------- Site 2087
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. H-EY--F--- G DL-------- Site 2087
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET H-PY--I--- N VW-------- Site 2087
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 H-DF--F--- Q MD-------- Site 2087
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U H-PY--I--- N VW-------- Site 2087
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. H-PF--F--- E PF-------- Site 2087
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo H-PY--L--- D EG-------- Site 2087
Bombus.terrestris.CDK1 H-PY--F--- T GV-------- Site 2087
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 H-PW--L--- N ---------- Site 2087
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar S-DF--F--- N KD-------- Site 2087
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. H-PY--I--- N VW-------- Site 2087
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d S-DF--L--- K DV-------- Site 2087
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. H-PY--F--- Q VQ-------- Site 2087
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. H-PF--F--- N EL-------- Site 2087
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G H-PY--F--- D EL-------- Site 2087
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 H-QYDYIYDW T ---------- Site 2048
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 R-TGDVSRGV I ---------- Site 2682
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO H-SF--T--- R LT-------- Site 2087
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C H-AY--F--- A QV-------- Site 2087
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl H-PY--L--- D EG-------- Site 2087
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 H-PY--F--- E NI-------- Site 2087
Homo.sapiens.HIPK3..Homeodomain.interacting.protei H-PF--V--- N MK-------- Site 2087
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O H-EY--F--- R ET-------- Site 2087
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d H-PV--F--- Q GL-------- Site 2087
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci H-PF--F--- A CL-------- Site 2087
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O H-EY--F--- R ET-------- Site 2087
Naegleria.gruberi.LF4 H-PY--F--- K EL-------- Site 2087
Saccharomyces.bayanus.IME2 M-PF--F--- E NT-------- Site 2087
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. H-PY--F--- Y PV-------- Site 2087
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a F-PF--F--- S EF-------- Site 2087
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki H-PY--F--- T SG-------- Site 2087
Dictyostelium.discoideum.DYRK1..Probable.serine.th H-SF--F--- L TD-------- Site 2087
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos H-GF--F--- R RT-------- Site 2087
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos H-PW--L--- R RR-------- Site 2087
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d H-PT--F--- Q TQ-------- Site 2087
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a H-PY--V--- Q RF-------- Site 2087
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific H-PY--L--- Q LQ-------- Site 2087
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos H-AW--I--- H EP-------- Site 2087
Aspergillus.nidulans.IME2 H-EY--F--- A DA-------- Site 2087
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi H-AF--F--- K DM-------- Site 2087
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se H-RY--L--- E EG-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. H-PY--F--- Q VG-------- Site 2087
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep H-PF--F--- Q DV-------- Site 2087
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. H-PY--I--- N VW-------- Site 2087
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. H-PF--F--- D EL-------- Site 2087
Penicillium.marneffei.IME2 H-EY--F--- A DA-------- Site 2087
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen H-PY--F--- A QY-------- Site 2087
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a H-PY--M--- S PY-------- Site 2087
Drosophila.melanogaster.MAK Y-PY--F--- H AL-------- Site 2087
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH H-PF--F--- I K--------- Site 2087
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr H-AF--I--- Q EK-------- Site 2087
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de S-DF--L--- K DV-------- Site 2087
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep H-PY--F--- K EL-------- Site 2087
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d S-SY--F--- K EK-------- Site 2087
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin H-PY--I--- N VW-------- Site 2087
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a H-PY--I--- T VW-------- Site 2087
Homo.sapiens.CLK1..Dual.specificity.protein.kinase H-PF--F--- D LL-------- Site 2087
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis H-PF--F--- K DM-------- Site 2087
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 H-QYDYIYDW T ---------- Site 2048
Candida.parapsilosis.IME2 S-KY--F--- S E--------- Site 2087
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p H-VF--F--- T SD-------- Site 2087
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen H-SF--F--- D EL-------- Site 2087
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. H-PY--I--- T VW-------- Site 2087
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki H-PY--F--- Y TV-------- Site 2087
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U H-PF--F--- D PL-------- Site 2087
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a H-PY--M--- S PY-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d H-PF--F--- L SL-------- Site 2087
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. H-PY--F--- Y TV-------- Site 2087
Yarrowia.lipolytica.SSN3..Serine.threonine.protein H-PY--F--- T EA-------- Site 2087
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. H-PY--F--- D EF-------- Site 2087
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos H-GF--F--- R RT-------- Site 2087
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE H-EY--F--- R PV-------- Site 2087
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH H-AF--F--- D EL-------- Site 2087
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD H-PF--F--- D EL-------- Site 2087
Candida.orthopsilosis.IME2 F-EY--F--- S K--------- Site 2087
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot M-KY--F--- S NR-------- Site 2087
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str H-EY--V--- N VW-------- Site 2087
Debaryomyces.hansenii.IME2 M-SY--F--- K NT-------- Site 2087
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati H-PF--F--- D EL-------- Site 2087
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin H-EY--F--- T NN-------- Site 2087
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE H-RY--F--- L HN-------- Site 2087
Caenorhabditis.briggsae.CDK1 H-PY--F--- N DI-------- Site 2087
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO H-PY--F--- L PI-------- Site 2087
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de H-QY--F--- F TA-------- Site 2087
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos H-PW--I--- S KS-------- Site 2087
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. H-PY--F--- H DL-------- Site 2087
Monosiga.brevicollis.CDK1 H-PY--F--- D DI-------- Site 2087
Saccharomyces.cerevisiae.SKY1 H-PW--L--- K DT-------- Site 2087
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP H-PY--L--- Q LY-------- Site 2087
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U H-DY--F--- T AD-------- Site 2087
Drosophila.melanogaster.GSK3..Protein.kinase.shagg H-PF--F--- D EL-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas R-EGFTYDFL F ---------- Site 2039
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. H-PY--V--- Q RF-------- Site 2087
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d H-DF--F--- Q MDGFAERFSQ Site 2087
Dictyostelium.discoideum.CDK10..Probable.cyclin.de H-PF--F--- Y EN-------- Site 2087
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d H-PT--F--- Q TQ-------- Site 2087
Ajellomyces.capsulatus.CDK1 H-PY--F--- Q AG-------- Site 2087
Dictystelium.discoideum.MAPK3..Extracellular.signa H-PY--F--- Q SL-------- Site 2087
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep H-PY--F--- Q DL-------- Site 2087
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep S-SY--F--- K EK-------- Site 2087
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac H-PY--I--- N VW-------- Site 2087
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. H-PF--F--- E PF-------- Site 2087
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO H-DY--F--- Q QE-------- Site 2087
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri H-PY--L--- E EG-------- Site 2087
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha H-PY--I--- N VW-------- Site 2087
Saccharomyces.cerevisiae.CDK1 H-PY--F--- Q ES-------- Site 2087
Lodderomyces.elongisporus.IME2 M-SY--F--- K ES-------- Site 2087
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen H-PY--F--- A QY-------- Site 2087
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un H-PF--F--- S PF-------- Site 2087
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar H-PS--F--- Q TQ-------- Site 2087
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. S-TY--F--- T DI-------- Site 2087
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D H-PY--V--- S RF-------- Site 2087
Homo.sapiens.CLK4..Dual.specificity.protein.kinase H-PF--F--- D LL-------- Site 2087
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U H-PF--V--- T MT-------- Site 2087
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d H-PY--F--- D SI-------- Site 2087
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen H-SF--F--- D EL-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 H-PY--F--- D NM-------- Site 2087
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep H-SY--L--- H KD-------- Site 2087
Cryptococcus.neoformans.SSN3..Serine.threonine.pro H-PW--F--- Q EE-------- Site 2087
Salmo.salar.CDK1 H-RF--F--- R DV-------- Site 2087
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d K-RY--F--- S NR-------- Site 2087
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d H-QY--F--- F TA-------- Site 2087
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi H-PY--V--- Q IQ-------- Site 2087
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen H-SF--F--- D EL-------- Site 2087
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable I-TF--L--- R G--------- Site 1889
Aspergillus.fumigatus.IME2 H-EY--F--- A DA-------- Site 2087
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan D-PY--F--- L EE-------- Site 2087
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha H-PF--F--- L PL-------- Site 2087
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha H-PY--F--- D QF-------- Site 2087
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S H-PY--L--- E EG-------- Site 2087
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma H-PF--V--- T MT-------- Site 2087
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina H-PY--L--- E QY-------- Site 2087
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d H-VY--F--- R SL-------- Site 2087
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. S-SY--F--- K EK-------- Site 2087
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de Q-PY--F--- D SL-------- Site 2087
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S H-EY--I--- N VW-------- Site 2087
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. H-PF--F--- S ET-------- Site 2087
Candida.glabrata.IME2 M-PF--F--- T NT-------- Site 2087
Homo.sapiens.MAK..Serine.threonine.protein.kinase. H-PY--F--- Q VG-------- Site 2087
Schizosaccharomyces.pombe.IME2 L-EF--C--- R VS-------- Site 2087
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P H-PY--L--- K LY-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl H-PY--F--- T DS-------- Site 2087
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom H-PF--V--- S MQ-------- Site 2087
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. D-YTFDWTML K ---------- Site 2051
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d H-PY--F--- Q SL-------- Site 2087
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d S-AY--F--- E SF-------- Site 2087
Branchiostoma.floridae.CDK1 H-VY--F--- H DV-------- Site 2087
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara H-PF--F--- D VL-------- Site 2087
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH H-PF--F--- D EL-------- Site 2087
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD NSEY--F--- L ND-------- Site 2087
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR H-AF--F--- D EL-------- Site 2087
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. Y-PY--F--- Q VG-------- Site 2087
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci H-PF--F--- A GL-------- Site 2087
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos H-SF--F--- K KT-------- Site 2087
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep H-PF--F--- Q DV-------- Site 2087
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act H-PF--L--- A KY-------- Site 2087
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. H-AY--F--- A QY-------- Site 2087
Lachancea.thermotolerans.SKY1 H-PW--L--- R DT-------- Site 2087
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a H-PY--M--- S IY-------- Site 2087
Dictyostelium.discoideum.CDK1 H-PY--F--- G DL-------- Site 2087
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. H-PY--F--- E SL-------- Site 2087
Xenopus.tropicalis.IME2 H-AF--F--- R DV-------- Site 2087
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U H-PF--V--- T MT-------- Site 2087
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. H-PY--F--- Y PI-------- Site 2087
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d H-PF--F--- R DV-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara H-QY--F--- F RK-------- Site 2087
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. H-DY--F--- S VL-------- Site 2087
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD H-PF--V--- T QF-------- Site 2087
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos H-SF--F--- K KT-------- Site 2087
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen H-SF--F--- D EL-------- Site 2087
Drosophila.melanogaster.GSK3H..Putative.glycogen.s H-PF--F--- D EL-------- Site 2087
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD H-QY--F--- K EA-------- Site 2087
Encephalitozoon.cuniculi.CDK1 H-KY--F--- E GM-------- Site 2087
Saccharomyces.kluyveri.IME2 M-PY--F--- K ET-------- Site 2087
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci H-PF--F--- D LL-------- Site 2087
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a H-PY--L--- E QY-------- Site 2087
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. H-DY--F--- S AL-------- Site 2087
Cryptococcus.neoformans.IME2 H-PY--F--- H ET-------- Site 2087
Homo.sapiens.HIPK4..Homeodomain.interacting.protei H-PF--V--- S MQ-------- Site 2087
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote H-PW--L--- N ---------- Site 2087
Candida.lusitaniae.IME2 S-TY--F--- K EY-------- Site 2087
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom H-QF--V--- T MS-------- Site 2087
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A D-PY--F--- S ED-------- Site 2087
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep H-PY--F--- F TD-------- Site 2087
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. Q-PY--F--- D SC-------- Site 2087
Gallus.gallus.CDK2 H-PF--F--- R DV-------- Site 2087
Emericella.nidulans.CDK1 H-PY--F--- Q HG-------- Site 2087
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. H-PY--F--- Q EQ-------- Site 2087
Homo.sapiens.CDK1 H-PY--F--- N DL-------- Site 2087
Candida.albicans.CDK1 H-PY--F--- N DN-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca H-SY--F--- Y PI-------- Site 2087
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a H-PF--L--- A KY-------- Site 2087
Mus.musculus.ICK..Serine.threonine.protein.kinase. Y-PY--F--- Q IG-------- Site 2087
Saccharomyces.castelli.IME2 M-EY--F--- K DT-------- Site 2087
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec H-PF--F--- T CL-------- Site 2087
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep T-KY--F--- S NR-------- Site 2087
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. H-EY--F--- S DL-------- Site 2087
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly H-RY--F--- D DL-------- Site 2087
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS T-PF--F--- N EL-------- Site 2087
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli M-RY--F--- S IR-------- Site 2087
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho H-DF--F--- W SD-------- Site 2087
Homo.sapiens.HIPK2..Homeodomain.interacting.protei H-PF--V--- T MT-------- Site 2087
Acyrthosiphon.pisum.CDK1 M-DY--F--- H SL-------- Site 2087
Candida.tropicalis.CDK1 M-PY--F--- K ET-------- Site 2087
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin D-QY--F--- Q EE-------- Site 2087
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G H-AM--F--- N EI-------- Site 2087
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR H-PY--F--- Y PI-------- Site 2087
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de H-PF--F--- L SL-------- Site 2087
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 H-AY--F--- A QV-------- Site 2087
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d H-VY--F--- R SL-------- Site 2087
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA H-PY--F--- D QF-------- Site 2087
Candida.albicans.SSN3..Serine.threonine.protein.ki H-PY--F--- L EL-------- Site 2087
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF H-PY--F--- R EI-------- Site 2087
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA H-QF--F--- S EL-------- Site 2087
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara H-SY--F--- D GL-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de H-EY--F--- T TP-------- Site 2087
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei H-PY--F--- Y PI-------- Site 2087
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U Q-SF--I--- T MK-------- Site 2087
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d H-EY--F--- R ET-------- Site 2087
Candida.dubliniensis.IME2 M-QY--F--- K ES-------- Site 2087
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a H-PY--I--- T VW-------- Site 2087
Aspergillus.niger.IME2 H-EY--F--- A DA-------- Site 2087
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge H-SY--F--- A QY-------- Site 2087
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d H-EY--F--- T RD-------- Site 2087
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. H-EY--F--- S DL-------- Site 2087
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein H-PY--F--- Y TV-------- Site 2087
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty H-TA--Y--- N Q--------- Site 2081
Schizosaccharomyces.japonicus.IME2 M-PF--L--- Y VP-------- Site 2087
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. H-PY--V--- N VW-------- Site 2087
Gallus.gallus.CDK1 H-PY--F--- D DL-------- Site 2087
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep H-PY--F--- S DF-------- Site 2087
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P H-PF--F--- D EL-------- Site 2087
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE H-EF--L--- K LK-------- Site 2087
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. H-AF--F--- D EL-------- Site 2087
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. H-PY--F--- E SL-------- Site 2087
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ H-KF--F--- K TK-------- Site 2087
Kluyveromyces.waltii.IME2 M-PY--F--- A ET-------- Site 2087
Debaryomyces.hansenii.SKY1 H-SW--L--- S DA-------- Site 2087
Saccharomyces.cerevisiae.IME2 M-PF--F--- E NT-------- Site 2087
Schizosaccharomyces.japonicus.b.IME2 L-RY--F--- S NG-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un H-PY--F--- H DL-------- Site 2087
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein H-PY--F--- Y PV-------- Site 2087
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a H-PY--M--- S IY-------- Site 2087
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep H-PY--F--- Q DL-------- Site 2087
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST S-SY--F--- D ET-------- Site 2087
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk H-AY--F--- E QF-------- Site 2087
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de H-DY--F--- T RD-------- Site 2087
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act H-PY--I--- N VW-------- Site 2087
Candida.albicans.IME2 M-QY--F--- K ES-------- Site 2087
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d H-PF--F--- A DD-------- Site 2087
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k H-PY--F--- F EN-------- Site 2087
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. H-AY--F--- A QY-------- Site 2087
Kluyveromyces.lactis.IME2 L-PY--F--- K EY-------- Site 2087
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina H-PF--L--- A KY-------- Site 2087
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. H-PY--I--- N VW-------- Site 2087
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. H-AY--F--- S QY-------- Site 2087
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 H-QYDYIYDW T ---------- Site 2048
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. H-AY--F--- S QY-------- Site 2087
Amphimedon.queenslandica.CDK1 H-PF--F--- S E--------- Site 2087
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d S-SY--F--- D SF-------- Site 2087
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U H-QY--F--- L CR-------- Site 2087
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME H-GF--F--- K EL-------- Site 2087
Neurospora.crassa.IME2 H-DY--F--- T DA-------- Site 2087
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME H-PY--F--- T DS-------- Site 2087
Dictyostelium.discoideum.DYRK2..Probable.serine.th H-DW--I--- I KV-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep H-SY--L--- H KE-------- Site 2087
Hydra.magnipapillata.CDK1 H-PY--F--- D DL-------- Site 2087
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar S-SY--F--- K EK-------- Site 2087
Ashbya.gossypii.IME2 M-PY--F--- A GT-------- Site 2087
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi H-PY--V--- Q IQ-------- Site 2087
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos H-PW--I--- S KS-------- Site 2087
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p S-PY--F--- D EL-------- Site 2087
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace H-PY--V--- S KF-------- Site 2087
Schizosaccharomyces.pombe.b.IME2 E-VF--F--- P L--------- Site 2087
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a H-PY--L--- E QY-------- Site 2087
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom H-PF--V--- N MK-------- Site 2087
Schizosaccharomyces.pombe.CDK1 Q-NY--L--- R DF-------- Site 2087
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch H-PF--F--- E NG-------- Site 2087
Saccoglossus.kowalevskii.CDK1 H-RY--F--- R DV-------- Site 2087
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas M-RLHRGAPV N ---------- Site 2494
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac H-PY--I--- N VW-------- Site 2087
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep H-PY--F--- S PG-------- Site 2087
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable V-TF--M--- S NS-------- Site 1920
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep H-PY--F--- S SP-------- Site 2087
Yarrowia.lipolytica.IME2 H-RY--F--- A QE-------- Site 2087
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil H-KY--F--- T ES-------- Site 2087
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli H-RF--F--- R DV-------- Site 2087
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K H-LW--F--- K EL-------- Site 2087
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly H-PF--F--- D EL-------- Site 2087
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk H-PF--F--- D EL-------- Site 2087
Species Residue at Site 3320
in 'msaprobs'
muscle

The residue for every species at site 3320 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro H-PF--L--- K QK-------- Site 2087
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo H-PY--L--- D EG-------- Site 2087
Scheffersomyces.stipitis.SKY1 H-PW--L--- S DA-------- Site 2087
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep H-PY--F--- S DF-------- Site 2087

Generated by PhyloBot at 11:06, October 23rd 2020
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