cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 3319 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3319 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3319 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3319 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -L-DF--F-- - VAK-------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -H-TW--L-- - KDV-------  
Danio.rerio.CDK1 -H-RF--F-- - RDV-------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -H-PY--L-- - TSL-------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -H-PY--F-- - ADF-------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -H-QY--F-- - TML-------  
Candida.guilliermondii.IME2 -Q-SY--F-- - MYT-------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -Q-RVNPSPG E A--------- Site 2696
Chlamydomonas.reinhardtii.LF4 -H-PY--F-- - RDL-------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -H-PF--F-- - DEL-------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -H-QYDYIYD W T--------- Site 2047
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -A-NGQTNKY P Y--------- Site 2701
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -D-PY--F-- - LED-------  
Schizosaccharomyces.octosporus.b.IME2 -E-KY--F-- - PKP-------  
Candida.albicans.MAPK3..Extracellular.signal.regul -H-PY--L-- - QLY-------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -H-PY--F-- - AQV-------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -G-EGGVDTL K D--------- Site 2493
Suberites.domuncula.JNK..Stress.activated.protein. -H-PY--V-- - SIW-------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -H-PF--F-- - AGL-------  
Aedes.aegypti.CDK1 -H-KY--F-- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -H-PF--F-- - YPL-------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -H-PF--F-- - ARL-------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -H-AW--I-- - HQS-------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -H-QF--V-- - TMT-------  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -H-PY--F-- - DSV-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -H-KF--F-- - EDF-------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -H-PY--F-- - YPV-------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -H-PY--L-- - EQY-------  
Strongylocentrotus.purpuratus.CDK1 -H-PY--F-- - KDV-------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -N-NVLLQST S L--------- Site 2493
Drosophila.melanogaster.CDK1 -H-PY--F-- - NGF-------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -S-NSNTRVN S Q--------- Site 2706
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -V-DSDQSPQ Q T--------- Site 2521
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -H-PW--M-- - NVT-------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -H-SY--F-- - RSL-------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -H-EY--F-- - GDL-------  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -H-PY--I-- - NVW-------  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -H-DF--F-- - QMD-------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -H-PY--I-- - NVW-------  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -H-PF--F-- - EPF-------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -H-PY--L-- - DEG-------  
Bombus.terrestris.CDK1 -H-PY--F-- - TGV-------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -H-PW--L-- - N---------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -S-DF--F-- - NKD-------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -H-PY--I-- - NVW-------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -S-DF--L-- - KDV-------  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -H-PY--F-- - QVQ-------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -H-PF--F-- - NEL-------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -H-PY--F-- - DEL-------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -H-QYDYIYD W T--------- Site 2047
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -R-TGDVSRG V I--------- Site 2681
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -H-SF--T-- - RLT-------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -H-AY--F-- - AQV-------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -H-PY--L-- - DEG-------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -H-PY--F-- - ENI-------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -H-PF--V-- - NMK-------  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -H-EY--F-- - RET-------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -H-PV--F-- - QGL-------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -H-PF--F-- - ACL-------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -H-EY--F-- - RET-------  
Naegleria.gruberi.LF4 -H-PY--F-- - KEL-------  
Saccharomyces.bayanus.IME2 -M-PF--F-- - ENT-------  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -H-PY--F-- - YPV-------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -F-PF--F-- - SEF-------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -H-PY--F-- - TSG-------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th -H-SF--F-- - LTD-------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -H-GF--F-- - RRT-------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -H-PW--L-- - RRR-------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -H-PT--F-- - QTQ-------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -H-PY--V-- - QRF-------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -H-PY--L-- - QLQ-------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -H-AW--I-- - HEP-------  
Aspergillus.nidulans.IME2 -H-EY--F-- - ADA-------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -H-AF--F-- - KDM-------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -H-RY--L-- - EEG-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -H-PY--F-- - QVG-------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -H-PF--F-- - QDV-------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -H-PY--I-- - NVW-------  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -H-PF--F-- - DEL-------  
Penicillium.marneffei.IME2 -H-EY--F-- - ADA-------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -H-PY--F-- - AQY-------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -H-PY--M-- - SPY-------  
Drosophila.melanogaster.MAK -Y-PY--F-- - HAL-------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -H-PF--F-- - IK--------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -H-AF--I-- - QEK-------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -S-DF--L-- - KDV-------  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -H-PY--F-- - KEL-------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -S-SY--F-- - KEK-------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -H-PY--I-- - NVW-------  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -H-PY--I-- - TVW-------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -H-PF--F-- - DLL-------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -H-PF--F-- - KDM-------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -H-QYDYIYD W T--------- Site 2047
Candida.parapsilosis.IME2 -S-KY--F-- - SE--------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -H-VF--F-- - TSD-------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -H-SF--F-- - DEL-------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -H-PY--I-- - TVW-------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -H-PY--F-- - YTV-------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -H-PF--F-- - DPL-------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -H-PY--M-- - SPY-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -H-PF--F-- - LSL-------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -H-PY--F-- - YTV-------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -H-PY--F-- - TEA-------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -H-PY--F-- - DEF-------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -H-GF--F-- - RRT-------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -H-EY--F-- - RPV-------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -H-AF--F-- - DEL-------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -H-PF--F-- - DEL-------  
Candida.orthopsilosis.IME2 -F-EY--F-- - SK--------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -M-KY--F-- - SNR-------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -H-EY--V-- - NVW-------  
Debaryomyces.hansenii.IME2 -M-SY--F-- - KNT-------  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -H-PF--F-- - DEL-------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -H-EY--F-- - TNN-------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -H-RY--F-- - LHN-------  
Caenorhabditis.briggsae.CDK1 -H-PY--F-- - NDI-------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -H-PY--F-- - LPI-------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -H-QY--F-- - FTA-------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -H-PW--I-- - SKS-------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -H-PY--F-- - HDL-------  
Monosiga.brevicollis.CDK1 -H-PY--F-- - DDI-------  
Saccharomyces.cerevisiae.SKY1 -H-PW--L-- - KDT-------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -H-PY--L-- - QLY-------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -H-DY--F-- - TAD-------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -H-PF--F-- - DEL-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -R-EGFTYDF L F--------- Site 2038
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -H-PY--V-- - QRF-------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -H-DF--F-- - QMDGFAERFS  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -H-PF--F-- - YEN-------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -H-PT--F-- - QTQ-------  
Ajellomyces.capsulatus.CDK1 -H-PY--F-- - QAG-------  
Dictystelium.discoideum.MAPK3..Extracellular.signa -H-PY--F-- - QSL-------  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -H-PY--F-- - QDL-------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -S-SY--F-- - KEK-------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -H-PY--I-- - NVW-------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -H-PF--F-- - EPF-------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -H-DY--F-- - QQE-------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -H-PY--L-- - EEG-------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -H-PY--I-- - NVW-------  
Saccharomyces.cerevisiae.CDK1 -H-PY--F-- - QES-------  
Lodderomyces.elongisporus.IME2 -M-SY--F-- - KES-------  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -H-PY--F-- - AQY-------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -H-PF--F-- - SPF-------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -H-PS--F-- - QTQ-------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. NS-TY--F-- - TDI-------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -H-PY--V-- - SRF-------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -H-PF--F-- - DLL-------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -H-PF--V-- - TMT-------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -H-PY--F-- - DSI-------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -H-SF--F-- - DEL-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -H-PY--F-- - DNM-------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -H-SY--L-- - HKD-------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -H-PW--F-- - QEE-------  
Salmo.salar.CDK1 -H-RF--F-- - RDV-------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -K-RY--F-- - SNR-------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -H-QY--F-- - FTA-------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -H-PY--V-- - QIQ-------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -H-SF--F-- - DEL-------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -I-TF--L-- - RG--------  
Aspergillus.fumigatus.IME2 -H-EY--F-- - ADA-------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -D-PY--F-- - LEE-------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -H-PF--F-- - LPL-------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -H-PY--F-- - DQF-------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -H-PY--L-- - EEG-------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -H-PF--V-- - TMT-------  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -H-PY--L-- - EQY-------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -H-VY--F-- - RSL-------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -S-SY--F-- - KEK-------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -Q-PY--F-- - DSL-------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -H-EY--I-- - NVW-------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -H-PF--F-- - SET-------  
Candida.glabrata.IME2 -M-PF--F-- - TNT-------  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -H-PY--F-- - QVG-------  
Schizosaccharomyces.pombe.IME2 -L-EF--C-- - RVS-------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -H-PY--L-- - KLY-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -H-PY--F-- - TDS-------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -H-PF--V-- - SMQ-------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -D-YTFDWTM L K--------- Site 2050
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -H-PY--F-- - QSL-------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -S-AY--F-- - ESF-------  
Branchiostoma.floridae.CDK1 -H-VY--F-- - HDV-------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -H-PF--F-- - DVL-------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -H-PF--F-- - DEL-------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -NSEY--F-- - LND-------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -H-AF--F-- - DEL-------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -Y-PY--F-- - QVG-------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -H-PF--F-- - AGL-------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -H-SF--F-- - KKT-------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -H-PF--F-- - QDV-------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -H-PF--L-- - AKY-------  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -H-AY--F-- - AQY-------  
Lachancea.thermotolerans.SKY1 -H-PW--L-- - RDT-------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -H-PY--M-- - SIY-------  
Dictyostelium.discoideum.CDK1 -H-PY--F-- - GDL-------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -H-PY--F-- - ESL-------  
Xenopus.tropicalis.IME2 -H-AF--F-- - RDV-------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -H-PF--V-- - TMT-------  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -H-PY--F-- - YPI-------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -H-PF--F-- - RDV-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -H-QY--F-- - FRK-------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -H-DY--F-- - SVL-------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -H-PF--V-- - TQF-------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -H-SF--F-- - KKT-------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -H-SF--F-- - DEL-------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -H-PF--F-- - DEL-------  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -H-QY--F-- - KEA-------  
Encephalitozoon.cuniculi.CDK1 -H-KY--F-- - EGM-------  
Saccharomyces.kluyveri.IME2 -M-PY--F-- - KET-------  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -H-PF--F-- - DLL-------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -H-PY--L-- - EQY-------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -H-DY--F-- - SAL-------  
Cryptococcus.neoformans.IME2 -H-PY--F-- - HET-------  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -H-PF--V-- - SMQ-------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -H-PW--L-- - N---------  
Candida.lusitaniae.IME2 -S-TY--F-- - KEY-------  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -H-QF--V-- - TMS-------  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -D-PY--F-- - SED-------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -H-PY--F-- - FTD-------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -Q-PY--F-- - DSC-------  
Gallus.gallus.CDK2 -H-PF--F-- - RDV-------  
Emericella.nidulans.CDK1 -H-PY--F-- - QHG-------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -H-PY--F-- - QEQ-------  
Homo.sapiens.CDK1 -H-PY--F-- - NDL-------  
Candida.albicans.CDK1 -H-PY--F-- - NDN-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -H-SY--F-- - YPI-------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -H-PF--L-- - AKY-------  
Mus.musculus.ICK..Serine.threonine.protein.kinase. -Y-PY--F-- - QIG-------  
Saccharomyces.castelli.IME2 -M-EY--F-- - KDT-------  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -H-PF--F-- - TCL-------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -T-KY--F-- - SNR-------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -H-EY--F-- - SDL-------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -H-RY--F-- - DDL-------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -T-PF--F-- - NEL-------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -M-RY--F-- - SIR-------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -H-DF--F-- - WSD-------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -H-PF--V-- - TMT-------  
Acyrthosiphon.pisum.CDK1 -M-DY--F-- - HSL-------  
Candida.tropicalis.CDK1 -M-PY--F-- - KET-------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -D-QY--F-- - QEE-------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -H-AM--F-- - NEI-------  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -H-PY--F-- - YPI-------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -H-PF--F-- - LSL-------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -H-AY--F-- - AQV-------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -H-VY--F-- - RSL-------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -H-PY--F-- - DQF-------  
Candida.albicans.SSN3..Serine.threonine.protein.ki -H-PY--F-- - LEL-------  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -H-PY--F-- - REI-------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -H-QF--F-- - SEL-------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -H-SY--F-- - DGL-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -H-EY--F-- - TTP-------  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -H-PY--F-- - YPI-------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -Q-SF--I-- - TMK-------  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -H-EY--F-- - RET-------  
Candida.dubliniensis.IME2 -M-QY--F-- - KES-------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -H-PY--I-- - TVW-------  
Aspergillus.niger.IME2 -H-EY--F-- - ADA-------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -H-SY--F-- - AQY-------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -H-EY--F-- - TRD-------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -H-EY--F-- - SDL-------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -H-PY--F-- - YTV-------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -H-TA--Y-- - NQ--------  
Schizosaccharomyces.japonicus.IME2 -M-PF--L-- - YVP-------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -H-PY--V-- - NVW-------  
Gallus.gallus.CDK1 -H-PY--F-- - DDL-------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -H-PY--F-- - SDF-------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -H-PF--F-- - DEL-------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -H-EF--L-- - KLK-------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -H-AF--F-- - DEL-------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -H-PY--F-- - ESL-------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -H-KF--F-- - KTK-------  
Kluyveromyces.waltii.IME2 -M-PY--F-- - AET-------  
Debaryomyces.hansenii.SKY1 -H-SW--L-- - SDA-------  
Saccharomyces.cerevisiae.IME2 -M-PF--F-- - ENT-------  
Schizosaccharomyces.japonicus.b.IME2 -L-RY--F-- - SNG-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -H-PY--F-- - HDL-------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -H-PY--F-- - YPV-------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -H-PY--M-- - SIY-------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -H-PY--F-- - QDL-------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -S-SY--F-- - DET-------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -H-AY--F-- - EQF-------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -H-DY--F-- - TRD-------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -H-PY--I-- - NVW-------  
Candida.albicans.IME2 -M-QY--F-- - KES-------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -H-PF--F-- - ADD-------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -H-PY--F-- - FEN-------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -H-AY--F-- - AQY-------  
Kluyveromyces.lactis.IME2 -L-PY--F-- - KEY-------  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -H-PF--L-- - AKY-------  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -H-PY--I-- - NVW-------  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -H-AY--F-- - SQY-------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -H-QYDYIYD W T--------- Site 2047
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -H-AY--F-- - SQY-------  
Amphimedon.queenslandica.CDK1 -H-PF--F-- - SE--------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -S-SY--F-- - DSF-------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -H-QY--F-- - LCR-------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -H-GF--F-- - KEL-------  
Neurospora.crassa.IME2 -H-DY--F-- - TDA-------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -H-PY--F-- - TDS-------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th -H-DW--I-- - IKV-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -H-SY--L-- - HKE-------  
Hydra.magnipapillata.CDK1 -H-PY--F-- - DDL-------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -S-SY--F-- - KEK-------  
Ashbya.gossypii.IME2 -M-PY--F-- - AGT-------  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -H-PY--V-- - QIQ-------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -H-PW--I-- - SKS-------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -S-PY--F-- - DEL-------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -H-PY--V-- - SKF-------  
Schizosaccharomyces.pombe.b.IME2 -E-VF--F-- - PL--------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -H-PY--L-- - EQY-------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -H-PF--V-- - NMK-------  
Schizosaccharomyces.pombe.CDK1 -Q-NY--L-- - RDF-------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -H-PF--F-- - ENG-------  
Saccoglossus.kowalevskii.CDK1 -H-RY--F-- - RDV-------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -M-RLHRGAP V N--------- Site 2493
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -H-PY--I-- - NVW-------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -H-PY--F-- - SPG-------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -V-TF--M-- - SNS-------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -H-PY--F-- - SSP-------  
Yarrowia.lipolytica.IME2 -H-RY--F-- - AQE-------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -H-KY--F-- - TES-------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -H-RF--F-- - RDV-------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -H-LW--F-- - KEL-------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -H-PF--F-- - DEL-------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -H-PF--F-- - DEL-------  
Species Residue at Site 3319
in 'msaprobs'
muscle

The residue for every species at site 3319 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -H-PF--L-- - KQK-------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -H-PY--L-- - DEG-------  
Scheffersomyces.stipitis.SKY1 -H-PW--L-- - SDA-------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -H-PY--F-- - SDF-------  

Generated by PhyloBot at 15:00, April 21st 2021
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