cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 3317 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3317 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3317 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3317 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -E-L-DF--F - --VAK-----  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -N-H-TW--L - --KDV-----  
Danio.rerio.CDK1 -V-H-RF--F - --RDV-----  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -A-H-PY--L - --TSL-----  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -Q-H-PY--F - --ADF-----  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -M-H-QY--F - --TML-----  
Candida.guilliermondii.IME2 -D-Q-SY--F - --MYT-----  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -T-Q-RVNPS P GEA------- Site 2694
Chlamydomonas.reinhardtii.LF4 -R-H-PY--F - --RDL-----  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -T-H-PF--F - --DEL-----  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -N-H-QYDYI Y DWT------- Site 2045
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -G-A-NGQTN K YPY------- Site 2699
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -Q-D-PY--F - --LED-----  
Schizosaccharomyces.octosporus.b.IME2 ---E-KY--F - --PKP-----  
Candida.albicans.MAPK3..Extracellular.signal.regul -K-H-PY--L - --QLY-----  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -A-H-PY--F - --AQV-----  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -L-G-EGGVD T LKD------- Site 2491
Suberites.domuncula.JNK..Stress.activated.protein. -A-H-PY--V - --SIW-----  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -L-H-PF--F - --AGL-----  
Aedes.aegypti.CDK1 -E-H-KY--F - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -K-H-PF--F - --YPL-----  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -Q-H-PF--F - --ARL-----  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -K-H-AW--I - --HQS-----  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -N-H-QF--V - --TMT-----  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -Q-H-PY--F - --DSV-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -N-H-KF--F - --EDF-----  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -E-H-PY--F - --YPV-----  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -A-H-PY--L - --EQY-----  
Strongylocentrotus.purpuratus.CDK1 -S-H-PY--F - --KDV-----  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -H-N-NVLLQ S TSL------- Site 2491
Drosophila.melanogaster.CDK1 -E-H-PY--F - --NGF-----  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -N-S-NSNTR V NSQ------- Site 2704
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -N-V-DSDQS P QQT------- Site 2519
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -D-H-PW--M - --NVT-----  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -S-H-SY--F - --RSL-----  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -H-H-EY--F - --GDL-----  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -Q-H-PY--I - --NVW-----  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -H-H-DF--F - --QMD-----  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -Q-H-PY--I - --NVW-----  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -T-H-PF--F - --EPF-----  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -A-H-PY--L - --DEG-----  
Bombus.terrestris.CDK1 -S-H-PY--F - --TGV-----  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -R-H-PW--L - --N-------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -Q-S-DF--F - --NKD-----  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -Q-H-PY--I - --NVW-----  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -Q-S-DF--L - --KDV-----  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -Q-H-PY--F - --QVQ-----  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -C-H-PF--F - --NEL-----  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -C-H-PY--F - --DEL-----  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -N-H-QYDYI Y DWT------- Site 2045
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -S-R-TGDVS R GVI------- Site 2679
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -N-H-SF--T - --RLT-----  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -A-H-AY--F - --AQV-----  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -A-H-PY--L - --DEG-----  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -H-H-PY--F - --ENI-----  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -N-H-PF--V - --NMK-----  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -K-H-EY--F - --RET-----  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -N-H-PV--F - --QGL-----  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -Q-H-PF--F - --ACL-----  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -K-H-EY--F - --RET-----  
Naegleria.gruberi.LF4 -R-H-PY--F - --KEL-----  
Saccharomyces.bayanus.IME2 -E-M-PF--F - --ENT-----  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -E-H-PY--F - --YPV-----  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -A-F-PF--F - --SEF-----  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -N-H-PY--F - --TSG-----  
Dictyostelium.discoideum.DYRK1..Probable.serine.th -Q-H-SF--F - --LTD-----  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -Q-H-GF--F - --RRT-----  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -R-H-PW--L - --RRR-----  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -N-H-PT--F - --QTQ-----  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -Q-H-PY--V - --QRF-----  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -D-H-PY--L - --QLQ-----  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -K-H-AW--I - --HEP-----  
Aspergillus.nidulans.IME2 -Q-H-EY--F - --ADA-----  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -L-H-AF--F - --KDM-----  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -Q-H-RY--L - --EEG-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -K-H-PY--F - --QVG-----  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -A-H-PF--F - --QDV-----  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -Q-H-PY--I - --NVW-----  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -T-H-PF--F - --DEL-----  
Penicillium.marneffei.IME2 -N-H-EY--F - --ADA-----  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -A-H-PY--F - --AQY-----  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -Q-H-PY--M - --SPY-----  
Drosophila.melanogaster.MAK -K-Y-PY--F - --HAL-----  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -K-H-PF--F - --IK------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -Q-H-AF--I - --QEK-----  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -Q-S-DF--L - --KDV-----  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -D-H-PY--F - --KEL-----  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -E-S-SY--F - --KEK-----  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -Q-H-PY--I - --NVW-----  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -R-H-PY--I - --TVW-----  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -K-H-PF--F - --DLL-----  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -L-H-PF--F - --KDM-----  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -N-H-QYDYI Y DWT------- Site 2045
Candida.parapsilosis.IME2 -C-S-KY--F - --SE------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -E-H-VF--F - --TSD-----  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -A-H-SF--F - --DEL-----  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -R-H-PY--I - --TVW-----  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -E-H-PY--F - --YTV-----  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -Q-H-PF--F - --DPL-----  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -Q-H-PY--M - --SPY-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -K-H-PF--F - --LSL-----  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -E-H-PY--F - --YTV-----  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -L-H-PY--F - --TEA-----  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -E-H-PY--F - --DEF-----  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -Q-H-GF--F - --RRT-----  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -G-H-EY--F - --RPV-----  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -A-H-AF--F - --DEL-----  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -A-H-PF--F - --DEL-----  
Candida.orthopsilosis.IME2 -C-F-EY--F - --SK------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -K-M-KY--F - --SNR-----  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -A-H-EY--V - --NVW-----  
Debaryomyces.hansenii.IME2 -A-M-SY--F - --KNT-----  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -T-H-PF--F - --DEL-----  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -E-H-EY--F - --TNN-----  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -C-H-RY--F - --LHN-----  
Caenorhabditis.briggsae.CDK1 -H-H-PY--F - --NDI-----  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -A-H-PY--F - --LPI-----  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -L-H-QY--F - --FTA-----  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -R-H-PW--I - --SKS-----  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -S-H-PY--F - --HDL-----  
Monosiga.brevicollis.CDK1 -C-H-PY--F - --DDI-----  
Saccharomyces.cerevisiae.SKY1 -N-H-PW--L - --KDT-----  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -R-H-PY--L - --QLY-----  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -Q-H-DY--F - --TAD-----  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -A-H-PF--F - --DEL-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -I-R-EGFTY D FLF------- Site 2036
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -Q-H-PY--V - --QRF-----  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -R-H-DF--F - --QMDGFAER  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -K-H-PF--F - --YEN-----  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -N-H-PT--F - --QTQ-----  
Ajellomyces.capsulatus.CDK1 -M-H-PY--F - --QAG-----  
Dictystelium.discoideum.MAPK3..Extracellular.signa -A-H-PY--F - --QSL-----  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -S-H-PY--F - --QDL-----  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -E-S-SY--F - --KEK-----  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -Q-H-PY--I - --NVW-----  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -A-H-PF--F - --EPF-----  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -E-H-DY--F - --QQE-----  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -A-H-PY--L - --EEG-----  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -Q-H-PY--I - --NVW-----  
Saccharomyces.cerevisiae.CDK1 -I-H-PY--F - --QES-----  
Lodderomyces.elongisporus.IME2 -K-M-SY--F - --KES-----  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -A-H-PY--F - --AQY-----  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -K-H-PF--F - --SPF-----  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -N-H-PS--F - --QTQ-----  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -FNS-TY--F - --TDI-----  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -R-H-PY--V - --SRF-----  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -Q-H-PF--F - --DLL-----  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -N-H-PF--V - --TMT-----  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -Q-H-PY--F - --DSI-----  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -A-H-SF--F - --DEL-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -V-H-PY--F - --DNM-----  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -Q-H-SY--L - --HKD-----  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -R-H-PW--F - --QEE-----  
Salmo.salar.CDK1 -V-H-RF--F - --RDV-----  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -R-K-RY--F - --SNR-----  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -L-H-QY--F - --FTA-----  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -A-H-PY--V - --QIQ-----  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -A-H-SF--F - --DEL-----  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -H-I-TF--L - --RG------  
Aspergillus.fumigatus.IME2 -N-H-EY--F - --ADA-----  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -Q-D-PY--F - --LEE-----  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -E-H-PF--F - --LPL-----  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -A-H-PY--F - --DQF-----  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -S-H-PY--L - --EEG-----  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -N-H-PF--V - --TMT-----  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -A-H-PY--L - --EQY-----  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -K-H-VY--F - --RSL-----  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -E-S-SY--F - --KEK-----  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -E-Q-PY--F - --DSL-----  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -K-H-EY--I - --NVW-----  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -Q-H-PF--F - --SET-----  
Candida.glabrata.IME2 -S-M-PF--F - --TNT-----  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -K-H-PY--F - --QVG-----  
Schizosaccharomyces.pombe.IME2 -D-L-EF--C - --RVS-----  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -K-H-PY--L - --KLY-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -Q-H-PY--F - --TDS-----  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -R-H-PF--V - --SMQ-----  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -Y-D-YTFDW T MLK------- Site 2048
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -N-H-PY--F - --QSL-----  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -D-S-AY--F - --ESF-----  
Branchiostoma.floridae.CDK1 -N-H-VY--F - --HDV-----  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -K-H-PF--F - --DVL-----  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -C-H-PF--F - --DEL-----  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -T-NSEY--F - --LND-----  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -Q-H-AF--F - --DEL-----  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -R-Y-PY--F - --QVG-----  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -L-H-PF--F - --AGL-----  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -Q-H-SF--F - --KKT-----  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -A-H-PF--F - --QDV-----  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -R-H-PF--L - --AKY-----  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -A-H-AY--F - --AQY-----  
Lachancea.thermotolerans.SKY1 -N-H-PW--L - --RDT-----  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -S-H-PY--M - --SIY-----  
Dictyostelium.discoideum.CDK1 -L-H-PY--F - --GDL-----  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -T-H-PY--F - --ESL-----  
Xenopus.tropicalis.IME2 -T-H-AF--F - --RDV-----  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -N-H-PF--V - --TMT-----  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -E-H-PY--F - --YPI-----  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -T-H-PF--F - --RDV-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -S-H-QY--F - --FRK-----  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -V-H-DY--F - --SVL-----  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -A-H-PF--V - --TQF-----  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -Q-H-SF--F - --KKT-----  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -A-H-SF--F - --DEL-----  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -A-H-PF--F - --DEL-----  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -K-H-QY--F - --KEA-----  
Encephalitozoon.cuniculi.CDK1 -S-H-KY--F - --EGM-----  
Saccharomyces.kluyveri.IME2 -C-M-PY--F - --KET-----  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -Q-H-PF--F - --DLL-----  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -A-H-PY--L - --EQY-----  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -V-H-DY--F - --SAL-----  
Cryptococcus.neoformans.IME2 -D-H-PY--F - --HET-----  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -R-H-PF--V - --SMQ-----  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -R-H-PW--L - --N-------  
Candida.lusitaniae.IME2 -R-S-TY--F - --KEY-----  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -N-H-QF--V - --TMS-----  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -Q-D-PY--F - --SED-----  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -L-H-PY--F - --FTD-----  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -Q-Q-PY--F - --DSC-----  
Gallus.gallus.CDK2 -S-H-PF--F - --RDV-----  
Emericella.nidulans.CDK1 -M-H-PY--F - --QHG-----  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -Q-H-PY--F - --QEQ-----  
Homo.sapiens.CDK1 -N-H-PY--F - --NDL-----  
Candida.albicans.CDK1 -I-H-PY--F - --NDN-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -D-H-SY--F - --YPI-----  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -R-H-PF--L - --AKY-----  
Mus.musculus.ICK..Serine.threonine.protein.kinase. -R-Y-PY--F - --QIG-----  
Saccharomyces.castelli.IME2 -L-M-EY--F - --KDT-----  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -R-H-PF--F - --TCL-----  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -K-T-KY--F - --SNR-----  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -S-H-EY--F - --SDL-----  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -C-H-RY--F - --DDL-----  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -K-T-PF--F - --NEL-----  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -K-M-RY--F - --SIR-----  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -N-H-DF--F - --WSD-----  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -N-H-PF--V - --TMT-----  
Acyrthosiphon.pisum.CDK1 -E-M-DY--F - --HSL-----  
Candida.tropicalis.CDK1 -K-M-PY--F - --KET-----  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -Q-D-QY--F - --QEE-----  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -A-H-AM--F - --NEI-----  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -D-H-PY--F - --YPI-----  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -K-H-PF--F - --LSL-----  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -A-H-AY--F - --AQV-----  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -K-H-VY--F - --RSL-----  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -A-H-PY--F - --DQF-----  
Candida.albicans.SSN3..Serine.threonine.protein.ki -L-H-PY--F - --LEL-----  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -R-H-PY--F - --REI-----  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -A-H-QF--F - --SEL-----  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -A-H-SY--F - --DGL-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -E-H-EY--F - --TTP-----  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -D-H-PY--F - --YPI-----  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -S-Q-SF--I - --TMK-----  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -K-H-EY--F - --RET-----  
Candida.dubliniensis.IME2 -K-M-QY--F - --KES-----  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -R-H-PY--I - --TVW-----  
Aspergillus.niger.IME2 -N-H-EY--F - --ADA-----  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -A-H-SY--F - --AQY-----  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -H-H-EY--F - --TRD-----  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -S-H-EY--F - --SDL-----  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -E-H-PY--F - --YTV-----  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty VS-H-TA--Y - --NQ------  
Schizosaccharomyces.japonicus.IME2 -A-M-PF--L - --YVP-----  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -R-H-PY--V - --NVW-----  
Gallus.gallus.CDK1 -N-H-PY--F - --DDL-----  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -Q-H-PY--F - --SDF-----  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -V-H-PF--F - --DEL-----  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -G-H-EF--L - --KLK-----  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -Q-H-AF--F - --DEL-----  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -A-H-PY--F - --ESL-----  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -D-H-KF--F - --KTK-----  
Kluyveromyces.waltii.IME2 -A-M-PY--F - --AET-----  
Debaryomyces.hansenii.SKY1 -N-H-SW--L - --SDA-----  
Saccharomyces.cerevisiae.IME2 -E-M-PF--F - --ENT-----  
Schizosaccharomyces.japonicus.b.IME2 ---L-RY--F - --SNG-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -S-H-PY--F - --HDL-----  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -E-H-PY--F - --YPV-----  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -S-H-PY--M - --SIY-----  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -N-H-PY--F - --QDL-----  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -L-S-SY--F - --DET-----  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -A-H-AY--F - --EQF-----  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -R-H-DY--F - --TRD-----  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -Q-H-PY--I - --NVW-----  
Candida.albicans.IME2 -K-M-QY--F - --KES-----  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -L-H-PF--F - --ADD-----  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -K-H-PY--F - --FEN-----  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -A-H-AY--F - --AQY-----  
Kluyveromyces.lactis.IME2 -A-L-PY--F - --KEY-----  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -R-H-PF--L - --AKY-----  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -Q-H-PY--I - --NVW-----  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -A-H-AY--F - --SQY-----  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -N-H-QYDYI Y DWT------- Site 2045
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -A-H-AY--F - --SQY-----  
Amphimedon.queenslandica.CDK1 -R-H-PF--F - --SE------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -E-S-SY--F - --DSF-----  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -N-H-QY--F - --LCR-----  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -K-H-GF--F - --KEL-----  
Neurospora.crassa.IME2 -A-H-DY--F - --TDA-----  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -Q-H-PY--F - --TDS-----  
Dictyostelium.discoideum.DYRK2..Probable.serine.th -K-H-DW--I - --IKV-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -Q-H-SY--L - --HKE-----  
Hydra.magnipapillata.CDK1 -N-H-PY--F - --DDL-----  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -D-S-SY--F - --KEK-----  
Ashbya.gossypii.IME2 -Q-M-PY--F - --AGT-----  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -T-H-PY--V - --QIQ-----  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -R-H-PW--I - --SKS-----  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -C-S-PY--F - --DEL-----  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -R-H-PY--V - --SKF-----  
Schizosaccharomyces.pombe.b.IME2 ---E-VF--F - --PL------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -A-H-PY--L - --EQY-----  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -N-H-PF--V - --NMK-----  
Schizosaccharomyces.pombe.CDK1 -Q-Q-NY--L - --RDF-----  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -K-H-PF--F - --ENG-----  
Saccoglossus.kowalevskii.CDK1 -S-H-RY--F - --RDV-----  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -S-M-RLHRG A PVN------- Site 2491
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -Q-H-PY--I - --NVW-----  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -A-H-PY--F - --SPG-----  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -Q-V-TF--M - --SNS-----  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -A-H-PY--F - --SSP-----  
Yarrowia.lipolytica.IME2 -Y-H-RY--F - --AQE-----  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -E-H-KY--F - --TES-----  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -V-H-RF--F - --RDV-----  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -E-H-LW--F - --KEL-----  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -V-H-PF--F - --DEL-----  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -C-H-PF--F - --DEL-----  
Species Residue at Site 3317
in 'msaprobs'
muscle

The residue for every species at site 3317 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -R-H-PF--L - --KQK-----  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -A-H-PY--L - --DEG-----  
Scheffersomyces.stipitis.SKY1 -N-H-PW--L - --SDA-----  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -Q-H-PY--F - --SDF-----  

Generated by PhyloBot at 01:15, December 7th 2019
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