cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 3316 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3316 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3316 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3316 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --E-L-DF-- F ---VAK---- Site 2086
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD --N-H-TW-- L ---KDV---- Site 2086
Danio.rerio.CDK1 --V-H-RF-- F ---RDV---- Site 2086
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --A-H-PY-- L ---TSL---- Site 2086
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d --Q-H-PY-- F ---ADF---- Site 2086
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK --M-H-QY-- F ---TML---- Site 2086
Candida.guilliermondii.IME2 --D-Q-SY-- F ---MYT---- Site 2086
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ --T-Q-RVNP S PGEA------ Site 2693
Chlamydomonas.reinhardtii.LF4 --R-H-PY-- F ---RDL---- Site 2086
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --T-H-PF-- F ---DEL---- Site 2086
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 --N-H-QYDY I YDWT------ Site 2044
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 --G-A-NGQT N KYPY------ Site 2698
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho --Q-D-PY-- F ---LED---- Site 2086
Schizosaccharomyces.octosporus.b.IME2 ----E-KY-- F ---PKP---- Site 2086
Candida.albicans.MAPK3..Extracellular.signal.regul --K-H-PY-- L ---QLY---- Site 2086
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. --A-H-PY-- F ---AQV---- Site 2086
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 --L-G-EGGV D TLKD------ Site 2490
Suberites.domuncula.JNK..Stress.activated.protein. --A-H-PY-- V ---SIW---- Site 2086
Homo.sapiens.CLK3..Dual.specificity.protein.kinase --L-H-PF-- F ---AGL---- Site 2086
Aedes.aegypti.CDK1 --E-H-KY-- F ---------- Site 2086
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci --K-H-PF-- F ---YPL---- Site 2086
Homo.sapiens.CLK2..Dual.specificity.protein.kinase --Q-H-PF-- F ---ARL---- Site 2086
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos --K-H-AW-- I ---HQS---- Site 2086
Homo.sapiens.HIPK1..Homeodomain.interacting.protei --N-H-QF-- V ---TMT---- Site 2086
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar --Q-H-PY-- F ---DSV---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --N-H-KF-- F ---EDF---- Site 2086
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --E-H-PY-- F ---YPV---- Site 2086
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --A-H-PY-- L ---EQY---- Site 2086
Strongylocentrotus.purpuratus.CDK1 --S-H-PY-- F ---KDV---- Site 2086
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca --H-N-NVLL Q STSL------ Site 2490
Drosophila.melanogaster.CDK1 --E-H-PY-- F ---NGF---- Site 2086
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 --N-S-NSNT R VNSQ------ Site 2703
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. --N-V-DSDQ S PQQT------ Site 2518
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH --D-H-PW-- M ---NVT---- Site 2086
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --S-H-SY-- F ---RSL---- Site 2086
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. --H-H-EY-- F ---GDL---- Site 2086
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --Q-H-PY-- I ---NVW---- Site 2086
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --H-H-DF-- F ---QMD---- Site 2086
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --Q-H-PY-- I ---NVW---- Site 2086
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --T-H-PF-- F ---EPF---- Site 2086
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --A-H-PY-- L ---DEG---- Site 2086
Bombus.terrestris.CDK1 --S-H-PY-- F ---TGV---- Site 2086
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 --R-H-PW-- L ---N------ Site 2086
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --Q-S-DF-- F ---NKD---- Site 2086
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --Q-H-PY-- I ---NVW---- Site 2086
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --Q-S-DF-- L ---KDV---- Site 2086
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. --Q-H-PY-- F ---QVQ---- Site 2086
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. --C-H-PF-- F ---NEL---- Site 2086
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G --C-H-PY-- F ---DEL---- Site 2086
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 --N-H-QYDY I YDWT------ Site 2044
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 --S-R-TGDV S RGVI------ Site 2678
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO --N-H-SF-- T ---RLT---- Site 2086
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --A-H-AY-- F ---AQV---- Site 2086
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --A-H-PY-- L ---DEG---- Site 2086
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --H-H-PY-- F ---ENI---- Site 2086
Homo.sapiens.HIPK3..Homeodomain.interacting.protei --N-H-PF-- V ---NMK---- Site 2086
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --K-H-EY-- F ---RET---- Site 2086
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --N-H-PV-- F ---QGL---- Site 2086
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci --Q-H-PF-- F ---ACL---- Site 2086
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --K-H-EY-- F ---RET---- Site 2086
Naegleria.gruberi.LF4 --R-H-PY-- F ---KEL---- Site 2086
Saccharomyces.bayanus.IME2 --E-M-PF-- F ---ENT---- Site 2086
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --E-H-PY-- F ---YPV---- Site 2086
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --A-F-PF-- F ---SEF---- Site 2086
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --N-H-PY-- F ---TSG---- Site 2086
Dictyostelium.discoideum.DYRK1..Probable.serine.th --Q-H-SF-- F ---LTD---- Site 2086
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos --Q-H-GF-- F ---RRT---- Site 2086
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos --R-H-PW-- L ---RRR---- Site 2086
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --N-H-PT-- F ---QTQ---- Site 2086
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --Q-H-PY-- V ---QRF---- Site 2086
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific --D-H-PY-- L ---QLQ---- Site 2086
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos --K-H-AW-- I ---HEP---- Site 2086
Aspergillus.nidulans.IME2 --Q-H-EY-- F ---ADA---- Site 2086
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi --L-H-AF-- F ---KDM---- Site 2086
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --Q-H-RY-- L ---EEG---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --K-H-PY-- F ---QVG---- Site 2086
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep --A-H-PF-- F ---QDV---- Site 2086
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --Q-H-PY-- I ---NVW---- Site 2086
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --T-H-PF-- F ---DEL---- Site 2086
Penicillium.marneffei.IME2 --N-H-EY-- F ---ADA---- Site 2086
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --A-H-PY-- F ---AQY---- Site 2086
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --Q-H-PY-- M ---SPY---- Site 2086
Drosophila.melanogaster.MAK --K-Y-PY-- F ---HAL---- Site 2086
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH --K-H-PF-- F ---IK----- Site 2086
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr --Q-H-AF-- I ---QEK---- Site 2086
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --Q-S-DF-- L ---KDV---- Site 2086
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep --D-H-PY-- F ---KEL---- Site 2086
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d --E-S-SY-- F ---KEK---- Site 2086
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --Q-H-PY-- I ---NVW---- Site 2086
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --R-H-PY-- I ---TVW---- Site 2086
Homo.sapiens.CLK1..Dual.specificity.protein.kinase --K-H-PF-- F ---DLL---- Site 2086
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis --L-H-PF-- F ---KDM---- Site 2086
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 --N-H-QYDY I YDWT------ Site 2044
Candida.parapsilosis.IME2 --C-S-KY-- F ---SE----- Site 2086
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p --E-H-VF-- F ---TSD---- Site 2086
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --A-H-SF-- F ---DEL---- Site 2086
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --R-H-PY-- I ---TVW---- Site 2086
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --E-H-PY-- F ---YTV---- Site 2086
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U --Q-H-PF-- F ---DPL---- Site 2086
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --Q-H-PY-- M ---SPY---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --K-H-PF-- F ---LSL---- Site 2086
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --E-H-PY-- F ---YTV---- Site 2086
Yarrowia.lipolytica.SSN3..Serine.threonine.protein --L-H-PY-- F ---TEA---- Site 2086
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --E-H-PY-- F ---DEF---- Site 2086
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos --Q-H-GF-- F ---RRT---- Site 2086
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --G-H-EY-- F ---RPV---- Site 2086
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --A-H-AF-- F ---DEL---- Site 2086
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --A-H-PF-- F ---DEL---- Site 2086
Candida.orthopsilosis.IME2 --C-F-EY-- F ---SK----- Site 2086
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --K-M-KY-- F ---SNR---- Site 2086
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --A-H-EY-- V ---NVW---- Site 2086
Debaryomyces.hansenii.IME2 --A-M-SY-- F ---KNT---- Site 2086
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --T-H-PF-- F ---DEL---- Site 2086
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin --E-H-EY-- F ---TNN---- Site 2086
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --C-H-RY-- F ---LHN---- Site 2086
Caenorhabditis.briggsae.CDK1 --H-H-PY-- F ---NDI---- Site 2086
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO --A-H-PY-- F ---LPI---- Site 2086
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --L-H-QY-- F ---FTA---- Site 2086
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos --R-H-PW-- I ---SKS---- Site 2086
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --S-H-PY-- F ---HDL---- Site 2086
Monosiga.brevicollis.CDK1 --C-H-PY-- F ---DDI---- Site 2086
Saccharomyces.cerevisiae.SKY1 --N-H-PW-- L ---KDT---- Site 2086
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --R-H-PY-- L ---QLY---- Site 2086
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --Q-H-DY-- F ---TAD---- Site 2086
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --A-H-PF-- F ---DEL---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas --I-R-EGFT Y DFLF------ Site 2035
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --Q-H-PY-- V ---QRF---- Site 2086
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d --R-H-DF-- F ---QMDGFAE Site 2086
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --K-H-PF-- F ---YEN---- Site 2086
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --N-H-PT-- F ---QTQ---- Site 2086
Ajellomyces.capsulatus.CDK1 --M-H-PY-- F ---QAG---- Site 2086
Dictystelium.discoideum.MAPK3..Extracellular.signa --A-H-PY-- F ---QSL---- Site 2086
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --S-H-PY-- F ---QDL---- Site 2086
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --E-S-SY-- F ---KEK---- Site 2086
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --Q-H-PY-- I ---NVW---- Site 2086
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --A-H-PF-- F ---EPF---- Site 2086
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --E-H-DY-- F ---QQE---- Site 2086
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --A-H-PY-- L ---EEG---- Site 2086
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --Q-H-PY-- I ---NVW---- Site 2086
Saccharomyces.cerevisiae.CDK1 --I-H-PY-- F ---QES---- Site 2086
Lodderomyces.elongisporus.IME2 --K-M-SY-- F ---KES---- Site 2086
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --A-H-PY-- F ---AQY---- Site 2086
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un --K-H-PF-- F ---SPF---- Site 2086
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --N-H-PS-- F ---QTQ---- Site 2086
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --FNS-TY-- F ---TDI---- Site 2086
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D --R-H-PY-- V ---SRF---- Site 2086
Homo.sapiens.CLK4..Dual.specificity.protein.kinase --Q-H-PF-- F ---DLL---- Site 2086
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U --N-H-PF-- V ---TMT---- Site 2086
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d --Q-H-PY-- F ---DSI---- Site 2086
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --A-H-SF-- F ---DEL---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --V-H-PY-- F ---DNM---- Site 2086
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep --Q-H-SY-- L ---HKD---- Site 2086
Cryptococcus.neoformans.SSN3..Serine.threonine.pro --R-H-PW-- F ---QEE---- Site 2086
Salmo.salar.CDK1 --V-H-RF-- F ---RDV---- Site 2086
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --R-K-RY-- F ---SNR---- Site 2086
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --L-H-QY-- F ---FTA---- Site 2086
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi --A-H-PY-- V ---QIQ---- Site 2086
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --A-H-SF-- F ---DEL---- Site 2086
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable --H-I-TF-- L ---RG----- Site 1888
Aspergillus.fumigatus.IME2 --N-H-EY-- F ---ADA---- Site 2086
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan --Q-D-PY-- F ---LEE---- Site 2086
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha --E-H-PF-- F ---LPL---- Site 2086
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --A-H-PY-- F ---DQF---- Site 2086
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --S-H-PY-- L ---EEG---- Site 2086
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma --N-H-PF-- V ---TMT---- Site 2086
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --A-H-PY-- L ---EQY---- Site 2086
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --K-H-VY-- F ---RSL---- Site 2086
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. --E-S-SY-- F ---KEK---- Site 2086
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --E-Q-PY-- F ---DSL---- Site 2086
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --K-H-EY-- I ---NVW---- Site 2086
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --Q-H-PF-- F ---SET---- Site 2086
Candida.glabrata.IME2 --S-M-PF-- F ---TNT---- Site 2086
Homo.sapiens.MAK..Serine.threonine.protein.kinase. --K-H-PY-- F ---QVG---- Site 2086
Schizosaccharomyces.pombe.IME2 --D-L-EF-- C ---RVS---- Site 2086
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --K-H-PY-- L ---KLY---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl --Q-H-PY-- F ---TDS---- Site 2086
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --R-H-PF-- V ---SMQ---- Site 2086
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. --Y-D-YTFD W TMLK------ Site 2047
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --N-H-PY-- F ---QSL---- Site 2086
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --D-S-AY-- F ---ESF---- Site 2086
Branchiostoma.floridae.CDK1 --N-H-VY-- F ---HDV---- Site 2086
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara --K-H-PF-- F ---DVL---- Site 2086
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --C-H-PF-- F ---DEL---- Site 2086
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --T-NSEY-- F ---LND---- Site 2086
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --Q-H-AF-- F ---DEL---- Site 2086
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --R-Y-PY-- F ---QVG---- Site 2086
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci --L-H-PF-- F ---AGL---- Site 2086
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos --Q-H-SF-- F ---KKT---- Site 2086
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep --A-H-PF-- F ---QDV---- Site 2086
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --R-H-PF-- L ---AKY---- Site 2086
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --A-H-AY-- F ---AQY---- Site 2086
Lachancea.thermotolerans.SKY1 --N-H-PW-- L ---RDT---- Site 2086
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --S-H-PY-- M ---SIY---- Site 2086
Dictyostelium.discoideum.CDK1 --L-H-PY-- F ---GDL---- Site 2086
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --T-H-PY-- F ---ESL---- Site 2086
Xenopus.tropicalis.IME2 --T-H-AF-- F ---RDV---- Site 2086
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U --N-H-PF-- V ---TMT---- Site 2086
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --E-H-PY-- F ---YPI---- Site 2086
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d --T-H-PF-- F ---RDV---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --S-H-QY-- F ---FRK---- Site 2086
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --V-H-DY-- F ---SVL---- Site 2086
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --A-H-PF-- V ---TQF---- Site 2086
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos --Q-H-SF-- F ---KKT---- Site 2086
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --A-H-SF-- F ---DEL---- Site 2086
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --A-H-PF-- F ---DEL---- Site 2086
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD --K-H-QY-- F ---KEA---- Site 2086
Encephalitozoon.cuniculi.CDK1 --S-H-KY-- F ---EGM---- Site 2086
Saccharomyces.kluyveri.IME2 --C-M-PY-- F ---KET---- Site 2086
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci --Q-H-PF-- F ---DLL---- Site 2086
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --A-H-PY-- L ---EQY---- Site 2086
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --V-H-DY-- F ---SAL---- Site 2086
Cryptococcus.neoformans.IME2 --D-H-PY-- F ---HET---- Site 2086
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --R-H-PF-- V ---SMQ---- Site 2086
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote --R-H-PW-- L ---N------ Site 2086
Candida.lusitaniae.IME2 --R-S-TY-- F ---KEY---- Site 2086
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom --N-H-QF-- V ---TMS---- Site 2086
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A --Q-D-PY-- F ---SED---- Site 2086
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --L-H-PY-- F ---FTD---- Site 2086
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --Q-Q-PY-- F ---DSC---- Site 2086
Gallus.gallus.CDK2 --S-H-PF-- F ---RDV---- Site 2086
Emericella.nidulans.CDK1 --M-H-PY-- F ---QHG---- Site 2086
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --Q-H-PY-- F ---QEQ---- Site 2086
Homo.sapiens.CDK1 --N-H-PY-- F ---NDL---- Site 2086
Candida.albicans.CDK1 --I-H-PY-- F ---NDN---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca --D-H-SY-- F ---YPI---- Site 2086
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --R-H-PF-- L ---AKY---- Site 2086
Mus.musculus.ICK..Serine.threonine.protein.kinase. --R-Y-PY-- F ---QIG---- Site 2086
Saccharomyces.castelli.IME2 --L-M-EY-- F ---KDT---- Site 2086
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec --R-H-PF-- F ---TCL---- Site 2086
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --K-T-KY-- F ---SNR---- Site 2086
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --S-H-EY-- F ---SDL---- Site 2086
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --C-H-RY-- F ---DDL---- Site 2086
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS --K-T-PF-- F ---NEL---- Site 2086
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --K-M-RY-- F ---SIR---- Site 2086
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --N-H-DF-- F ---WSD---- Site 2086
Homo.sapiens.HIPK2..Homeodomain.interacting.protei --N-H-PF-- V ---TMT---- Site 2086
Acyrthosiphon.pisum.CDK1 --E-M-DY-- F ---HSL---- Site 2086
Candida.tropicalis.CDK1 --K-M-PY-- F ---KET---- Site 2086
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin --Q-D-QY-- F ---QEE---- Site 2086
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --A-H-AM-- F ---NEI---- Site 2086
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --D-H-PY-- F ---YPI---- Site 2086
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --K-H-PF-- F ---LSL---- Site 2086
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --A-H-AY-- F ---AQV---- Site 2086
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --K-H-VY-- F ---RSL---- Site 2086
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --A-H-PY-- F ---DQF---- Site 2086
Candida.albicans.SSN3..Serine.threonine.protein.ki --L-H-PY-- F ---LEL---- Site 2086
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --R-H-PY-- F ---REI---- Site 2086
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --A-H-QF-- F ---SEL---- Site 2086
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --A-H-SY-- F ---DGL---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de --E-H-EY-- F ---TTP---- Site 2086
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --D-H-PY-- F ---YPI---- Site 2086
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U --S-Q-SF-- I ---TMK---- Site 2086
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --K-H-EY-- F ---RET---- Site 2086
Candida.dubliniensis.IME2 --K-M-QY-- F ---KES---- Site 2086
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --R-H-PY-- I ---TVW---- Site 2086
Aspergillus.niger.IME2 --N-H-EY-- F ---ADA---- Site 2086
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --A-H-SY-- F ---AQY---- Site 2086
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d --H-H-EY-- F ---TRD---- Site 2086
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --S-H-EY-- F ---SDL---- Site 2086
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --E-H-PY-- F ---YTV---- Site 2086
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty PVS-H-TA-- Y ---NQ----- Site 2080
Schizosaccharomyces.japonicus.IME2 --A-M-PF-- L ---YVP---- Site 2086
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --R-H-PY-- V ---NVW---- Site 2086
Gallus.gallus.CDK1 --N-H-PY-- F ---DDL---- Site 2086
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep --Q-H-PY-- F ---SDF---- Site 2086
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P --V-H-PF-- F ---DEL---- Site 2086
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE --G-H-EF-- L ---KLK---- Site 2086
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --Q-H-AF-- F ---DEL---- Site 2086
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --A-H-PY-- F ---ESL---- Site 2086
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --D-H-KF-- F ---KTK---- Site 2086
Kluyveromyces.waltii.IME2 --A-M-PY-- F ---AET---- Site 2086
Debaryomyces.hansenii.SKY1 --N-H-SW-- L ---SDA---- Site 2086
Saccharomyces.cerevisiae.IME2 --E-M-PF-- F ---ENT---- Site 2086
Schizosaccharomyces.japonicus.b.IME2 ----L-RY-- F ---SNG---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --S-H-PY-- F ---HDL---- Site 2086
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --E-H-PY-- F ---YPV---- Site 2086
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --S-H-PY-- M ---SIY---- Site 2086
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --N-H-PY-- F ---QDL---- Site 2086
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --L-S-SY-- F ---DET---- Site 2086
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --A-H-AY-- F ---EQF---- Site 2086
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de --R-H-DY-- F ---TRD---- Site 2086
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --Q-H-PY-- I ---NVW---- Site 2086
Candida.albicans.IME2 --K-M-QY-- F ---KES---- Site 2086
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --L-H-PF-- F ---ADD---- Site 2086
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k --K-H-PY-- F ---FEN---- Site 2086
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --A-H-AY-- F ---AQY---- Site 2086
Kluyveromyces.lactis.IME2 --A-L-PY-- F ---KEY---- Site 2086
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --R-H-PF-- L ---AKY---- Site 2086
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --Q-H-PY-- I ---NVW---- Site 2086
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --A-H-AY-- F ---SQY---- Site 2086
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 --N-H-QYDY I YDWT------ Site 2044
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --A-H-AY-- F ---SQY---- Site 2086
Amphimedon.queenslandica.CDK1 --R-H-PF-- F ---SE----- Site 2086
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d --E-S-SY-- F ---DSF---- Site 2086
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --N-H-QY-- F ---LCR---- Site 2086
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME --K-H-GF-- F ---KEL---- Site 2086
Neurospora.crassa.IME2 --A-H-DY-- F ---TDA---- Site 2086
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME --Q-H-PY-- F ---TDS---- Site 2086
Dictyostelium.discoideum.DYRK2..Probable.serine.th --K-H-DW-- I ---IKV---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep --Q-H-SY-- L ---HKE---- Site 2086
Hydra.magnipapillata.CDK1 --N-H-PY-- F ---DDL---- Site 2086
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar --D-S-SY-- F ---KEK---- Site 2086
Ashbya.gossypii.IME2 --Q-M-PY-- F ---AGT---- Site 2086
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi --T-H-PY-- V ---QIQ---- Site 2086
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos --R-H-PW-- I ---SKS---- Site 2086
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p --C-S-PY-- F ---DEL---- Site 2086
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --R-H-PY-- V ---SKF---- Site 2086
Schizosaccharomyces.pombe.b.IME2 ----E-VF-- F ---PL----- Site 2086
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a --A-H-PY-- L ---EQY---- Site 2086
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom --N-H-PF-- V ---NMK---- Site 2086
Schizosaccharomyces.pombe.CDK1 --Q-Q-NY-- L ---RDF---- Site 2086
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch --K-H-PF-- F ---ENG---- Site 2086
Saccoglossus.kowalevskii.CDK1 --S-H-RY-- F ---RDV---- Site 2086
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas --S-M-RLHR G APVN------ Site 2490
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --Q-H-PY-- I ---NVW---- Site 2086
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep --A-H-PY-- F ---SPG---- Site 2086
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable --Q-V-TF-- M ---SNS---- Site 1919
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep --A-H-PY-- F ---SSP---- Site 2086
Yarrowia.lipolytica.IME2 --Y-H-RY-- F ---AQE---- Site 2086
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil --E-H-KY-- F ---TES---- Site 2086
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli --V-H-RF-- F ---RDV---- Site 2086
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K --E-H-LW-- F ---KEL---- Site 2086
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --V-H-PF-- F ---DEL---- Site 2086
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --C-H-PF-- F ---DEL---- Site 2086
Species Residue at Site 3316
in 'msaprobs'
muscle

The residue for every species at site 3316 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro --R-H-PF-- L ---KQK---- Site 2086
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --A-H-PY-- L ---DEG---- Site 2086
Scheffersomyces.stipitis.SKY1 --N-H-PW-- L ---SDA---- Site 2086
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep --Q-H-PY-- F ---SDF---- Site 2086

Generated by PhyloBot at 10:35, October 23rd 2020
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