cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 3304 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3304 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3304 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3304 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------A C L--E-L-DF- Site 2072
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------D C L--N-H-TW- Site 2072
Danio.rerio.CDK1 ---------N A L--V-H-RF- Site 2072
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------D A L--A-H-PY- Site 2072
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------E A L--Q-H-PY- Site 2072
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------Q A L--M-H-QY- Site 2072
Candida.guilliermondii.IME2 ---------E L Y--D-Q-SY- Site 2072
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ LFSSNSGSRP S S--T-Q-RVN Site 2685
Chlamydomonas.reinhardtii.LF4 ---------Q A L--R-H-PY- Site 2072
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------E V L--T-H-PF- Site 2072
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 LRQLFRILFR T L--N-H-QYD Site 2012
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 QMQQKSKQFA N T--G-A-NGQ Site 2690
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------Q A M--Q-D-PY- Site 2072
Schizosaccharomyces.octosporus.b.IME2 ---------S C K----E-KY- Site 2072
Candida.albicans.MAPK3..Extracellular.signal.regul ---------D A L--K-H-PY- Site 2072
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------E A M--A-H-PY- Site 2072
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 PLVKEEETSR R M--L-G-EGG Site 2482
Suberites.domuncula.JNK..Stress.activated.protein. ---------Q A L--A-H-PY- Site 2072
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------E A L--L-H-PF- Site 2072
Aedes.aegypti.CDK1 ---------K I L--E-H-KY- Site 2072
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------E A L--K-H-PF- Site 2072
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------E A L--Q-H-PF- Site 2072
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------Q A L--K-H-AW- Site 2072
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------K T L--N-H-QF- Site 2072
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------Q L L--Q-H-PY- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------Q A L--N-H-KF- Site 2072
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------E A M--E-H-PY- Site 2072
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------E A L--A-H-PY- Site 2072
Strongylocentrotus.purpuratus.CDK1 ---------T G L--S-H-PY- Site 2072
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca NLHPERLGVS A S--H-N-NVL Site 2482
Drosophila.melanogaster.CDK1 ---------D I L--E-H-PY- Site 2072
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 AGAVPLPNIA K Q--N-S-NSN Site 2695
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. QFRQLLSTPS Y N--N-V-DSD Site 2510
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------Q C L--D-H-PW- Site 2072
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------A A L--S-H-SY- Site 2072
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------Q A L--H-H-EY- Site 2072
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------E A L--Q-H-PY- Site 2072
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------E L L--H-H-DF- Site 2072
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------E A L--Q-H-PY- Site 2072
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------Q A L--T-H-PF- Site 2072
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------D A L--A-H-PY- Site 2072
Bombus.terrestris.CDK1 ---------K G L--S-H-PY- Site 2072
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------E C L--R-H-PW- Site 2072
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------E L L--Q-S-DF- Site 2072
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------D A L--Q-H-PY- Site 2072
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------Q T L--Q-S-DF- Site 2072
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------Q A L--Q-H-PY- Site 2072
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------D A L--C-H-PF- Site 2072
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------E A L--C-H-PY- Site 2072
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 LRQLFRILFR T L--N-H-QYD Site 2012
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 DNFPGSEELL Q R--S-R-TGD Site 2670
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------E A L--N-H-SF- Site 2072
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------E A M--A-H-AY- Site 2072
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------D A L--A-H-PY- Site 2072
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------Q L L--H-H-PY- Site 2072
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------E T L--N-H-PF- Site 2072
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------D G L--K-H-EY- Site 2072
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------Q C L--N-H-PV- Site 2072
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------E A L--Q-H-PF- Site 2072
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------D G L--K-H-EY- Site 2072
Naegleria.gruberi.LF4 ---------K A L--R-H-PY- Site 2072
Saccharomyces.bayanus.IME2 ---------E L C--E-M-PF- Site 2072
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------E A M--E-H-PY- Site 2072
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------E A L--A-F-PF- Site 2072
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------D A L--N-H-PY- Site 2072
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------E A L--Q-H-SF- Site 2072
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------G A L--Q-H-GF- Site 2072
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------Q A L--R-H-PW- Site 2072
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------Q C L--N-H-PT- Site 2072
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------Q A L--Q-H-PY- Site 2072
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------E L L--D-H-PY- Site 2072
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------Q A L--K-H-AW- Site 2072
Aspergillus.nidulans.IME2 ---------Q A M--Q-H-EY- Site 2072
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------A A L--L-H-AF- Site 2072
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------E A L--Q-H-RY- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------Q A L--K-H-PY- Site 2072
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------A A L--A-H-PF- Site 2072
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------E A L--Q-H-PY- Site 2072
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------D A L--T-H-PF- Site 2072
Penicillium.marneffei.IME2 ---------Q A L--N-H-EY- Site 2072
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------Q A L--A-H-PY- Site 2072
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------M G L--Q-H-PY- Site 2072
Drosophila.melanogaster.MAK ---------Q S L--K-Y-PY- Site 2072
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------V A L--K-H-PF- Site 2072
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------Q A L--Q-H-AF- Site 2072
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------Q T L--Q-S-DF- Site 2072
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------E A L--D-H-PY- Site 2072
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------D C L--E-S-SY- Site 2072
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------D A L--Q-H-PY- Site 2072
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------E A L--R-H-PY- Site 2072
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------E A L--K-H-PF- Site 2072
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------E A L--L-H-PF- Site 2072
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 LRQLFRILFR T L--N-H-QYD Site 2012
Candida.parapsilosis.IME2 ---------D L A--C-S-KY- Site 2072
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------Q A L--E-H-VF- Site 2072
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------E A C--A-H-SF- Site 2072
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------E A L--R-H-PY- Site 2072
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------E A M--E-H-PY- Site 2072
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------E A L--Q-H-PF- Site 2072
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------M G L--Q-H-PY- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------D A R--K-H-PF- Site 2072
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------E A M--E-H-PY- Site 2072
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------D A L--L-H-PY- Site 2072
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------E A L--E-H-PY- Site 2072
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------G A L--Q-H-GF- Site 2072
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------E A M--G-H-EY- Site 2072
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------E G C--A-H-AF- Site 2072
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------E I C--A-H-PF- Site 2072
Candida.orthopsilosis.IME2 ---------E L A--C-F-EY- Site 2072
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------Q A L--K-M-KY- Site 2072
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------D A L--A-H-EY- Site 2072
Debaryomyces.hansenii.IME2 ---------T V C--A-M-SY- Site 2072
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------Q A M--T-H-PF- Site 2072
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------D A L--E-H-EY- Site 2072
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------G A L--C-H-RY- Site 2072
Caenorhabditis.briggsae.CDK1 ---------K A L--H-H-PY- Site 2072
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------E A M--A-H-PY- Site 2072
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------Q A L--L-H-QY- Site 2072
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------Q A L--R-H-PW- Site 2072
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------A A L--S-H-PY- Site 2072
Monosiga.brevicollis.CDK1 ---------V A L--C-H-PY- Site 2072
Saccharomyces.cerevisiae.SKY1 ---------G L V--N-H-PW- Site 2072
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------D A L--R-H-PY- Site 2072
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------R L L--Q-H-DY- Site 2072
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------K A C--A-H-PF- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas YTYLRRLLKD L F--I-R-EGF Site 2027
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------Q A L--Q-H-PY- Site 2072
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------D L L--R-H-DF- Site 2072
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------D A I--K-H-PF- Site 2072
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------Q C L--N-H-PT- Site 2072
Ajellomyces.capsulatus.CDK1 ---------Q A C--M-H-PY- Site 2072
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------E A L--A-H-PY- Site 2072
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------S A L--S-H-PY- Site 2072
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------D C L--E-S-SY- Site 2072
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------E A L--Q-H-PY- Site 2072
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------Q A L--A-H-PF- Site 2072
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------A C L--E-H-DY- Site 2072
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------D A L--A-H-PY- Site 2072
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------E A L--Q-H-PY- Site 2072
Saccharomyces.cerevisiae.CDK1 ---------R A A--I-H-PY- Site 2072
Lodderomyces.elongisporus.IME2 ---------Q L S--K-M-SY- Site 2072
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------E A L--A-H-PY- Site 2072
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------A A L--K-H-PF- Site 2072
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------Q C L--N-H-PS- Site 2072
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------Q C M--FNS-TY- Site 2072
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------E A I--R-H-PY- Site 2072
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------E A L--Q-H-PF- Site 2072
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------E T L--N-H-PF- Site 2072
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------Q L L--Q-H-PY- Site 2072
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------E A C--A-H-SF- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------K A L--V-H-PY- Site 2072
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------R A L--Q-H-SY- Site 2072
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------D A L--R-H-PW- Site 2072
Salmo.salar.CDK1 ---------N A L--V-H-RF- Site 2072
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------Q A L--R-K-RY- Site 2072
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------K A L--L-H-QY- Site 2072
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------E L L--A-H-PY- Site 2072
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------E A C--A-H-SF- Site 2072
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------D V V--H-I-TF- Site 1882
Aspergillus.fumigatus.IME2 ---------D A L--N-H-EY- Site 2072
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------Q A M--Q-D-PY- Site 2072
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------S A L--E-H-PF- Site 2072
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------E A L--A-H-PY- Site 2072
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------E A L--S-H-PY- Site 2072
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------E T L--N-H-PF- Site 2072
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------E A L--A-H-PY- Site 2072
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------E A M--K-H-VY- Site 2072
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------D C L--E-S-SY- Site 2072
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------Q L L--E-Q-PY- Site 2072
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------E A L--K-H-EY- Site 2072
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------E A L--Q-H-PF- Site 2072
Candida.glabrata.IME2 ---------Q L S--S-M-PF- Site 2072
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------Q A L--K-H-PY- Site 2072
Schizosaccharomyces.pombe.IME2 ---------M C L--D-L-EF- Site 2072
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------D A L--K-H-PY- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------Q A M--Q-H-PY- Site 2072
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------A A L--R-H-PF- Site 2072
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. LFRILFRTLN H Q--Y-D-YTF Site 2037
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------A A L--N-H-PY- Site 2072
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------Q L L--D-S-AY- Site 2072
Branchiostoma.floridae.CDK1 ---------A A I--N-H-VY- Site 2072
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------E A L--K-H-PF- Site 2072
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------E A M--C-H-PF- Site 2072
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------S L L--T-NSEY- Site 2072
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------A A C--Q-H-AF- Site 2072
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------Q A L--R-Y-PY- Site 2072
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------E A L--L-H-PF- Site 2072
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------Y A L--Q-H-SF- Site 2072
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------A A L--A-H-PF- Site 2072
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------A A L--R-H-PF- Site 2072
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------Q A L--A-H-AY- Site 2072
Lachancea.thermotolerans.SKY1 ---------G M V--N-H-PW- Site 2072
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------E A L--S-H-PY- Site 2072
Dictyostelium.discoideum.CDK1 ---------E A L--L-H-PY- Site 2072
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------E A L--T-H-PY- Site 2072
Xenopus.tropicalis.IME2 ---------A A L--T-H-AF- Site 2072
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------K T L--N-H-PF- Site 2072
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------E A M--E-H-PY- Site 2072
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------V A L--T-H-PF- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------A A L--S-H-QY- Site 2072
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------E A L--V-H-DY- Site 2072
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------E A L--A-H-PF- Site 2072
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------Y A L--Q-H-SF- Site 2072
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------E A C--A-H-SF- Site 2072
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------M G C--A-H-PF- Site 2072
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------A A L--K-H-QY- Site 2072
Encephalitozoon.cuniculi.CDK1 ---------N G L--S-H-KY- Site 2072
Saccharomyces.kluyveri.IME2 ---------Q V C--C-M-PY- Site 2072
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------E A L--Q-H-PF- Site 2072
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------Q A L--A-H-PY- Site 2072
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------E A L--V-H-DY- Site 2072
Cryptococcus.neoformans.IME2 ---------Q C I--D-H-PY- Site 2072
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------A A L--R-H-PF- Site 2072
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------E C L--R-H-PW- Site 2072
Candida.lusitaniae.IME2 ---------E L F--R-S-TY- Site 2072
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------K T L--N-H-QF- Site 2072
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------Q A M--Q-D-PY- Site 2072
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------Q A L--L-H-PY- Site 2072
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------Q L L--Q-Q-PY- Site 2072
Gallus.gallus.CDK2 ---------A A L--S-H-PF- Site 2072
Emericella.nidulans.CDK1 ---------Q A C--M-H-PY- Site 2072
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------Q A L--Q-H-PY- Site 2072
Homo.sapiens.CDK1 ---------M A L--N-H-PY- Site 2072
Candida.albicans.CDK1 ---------R A L--I-H-PY- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------E A M--D-H-SY- Site 2072
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------A A L--R-H-PF- Site 2072
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------Q A L--R-Y-PY- Site 2072
Saccharomyces.castelli.IME2 ---------D L C--L-M-EY- Site 2072
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------Q A L--R-H-PF- Site 2072
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------Q A L--K-T-KY- Site 2072
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------A A L--S-H-EY- Site 2072
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------E I C--C-H-RY- Site 2072
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------D L L--K-T-PF- Site 2072
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------Q A L--K-M-RY- Site 2072
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------D A L--N-H-DF- Site 2072
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------E T L--N-H-PF- Site 2072
Acyrthosiphon.pisum.CDK1 ---------K I L--E-M-DY- Site 2072
Candida.tropicalis.CDK1 ---------E L A--K-M-PY- Site 2072
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------Q A M--Q-D-QY- Site 2072
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------E A C--A-H-AM- Site 2072
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------E A M--D-H-PY- Site 2072
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------D A M--K-H-PF- Site 2072
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------E A M--A-H-AY- Site 2072
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------E A M--K-H-VY- Site 2072
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------E A L--A-H-PY- Site 2072
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------Q A L--L-H-PY- Site 2072
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------Q A L--R-H-PY- Site 2072
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------E A C--A-H-QF- Site 2072
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------G A L--A-H-SY- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------M A L--E-H-EY- Site 2072
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------E A M--D-H-PY- Site 2072
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------D T L--S-Q-SF- Site 2072
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------D G L--K-H-EY- Site 2072
Candida.dubliniensis.IME2 ---------E I A--K-M-QY- Site 2072
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------E A L--R-H-PY- Site 2072
Aspergillus.niger.IME2 ---------Q A L--N-H-EY- Site 2072
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------E A L--A-H-SY- Site 2072
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------D L L--H-H-EY- Site 2072
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------A A L--S-H-EY- Site 2072
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------E A M--E-H-PY- Site 2072
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------T L FPVS-H-TA- Site 2072
Schizosaccharomyces.japonicus.IME2 ---------E C L--A-M-PF- Site 2072
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------D A L--R-H-PY- Site 2072
Gallus.gallus.CDK1 ---------M A L--N-H-PY- Site 2072
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------E A L--Q-H-PY- Site 2072
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------N A M--V-H-PF- Site 2072
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------A A L--G-H-EF- Site 2072
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------A A C--Q-H-AF- Site 2072
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------E A L--A-H-PY- Site 2072
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------E A M--D-H-KF- Site 2072
Kluyveromyces.waltii.IME2 ---------E I C--A-M-PY- Site 2072
Debaryomyces.hansenii.SKY1 ---------G M V--N-H-SW- Site 2072
Saccharomyces.cerevisiae.IME2 ---------E L C--E-M-PF- Site 2072
Schizosaccharomyces.japonicus.b.IME2 ---------L C I----L-RY- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------S A L--S-H-PY- Site 2072
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------E A M--E-H-PY- Site 2072
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------E A L--S-H-PY- Site 2072
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------G A L--N-H-PY- Site 2072
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------Q C L--L-S-SY- Site 2072
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------E A L--A-H-AY- Site 2072
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------D L L--R-H-DY- Site 2072
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------E A L--Q-H-PY- Site 2072
Candida.albicans.IME2 ---------E I A--K-M-QY- Site 2072
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------D A L--L-H-PF- Site 2072
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------D A L--K-H-PY- Site 2072
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------Q A L--A-H-AY- Site 2072
Kluyveromyces.lactis.IME2 ---------E I C--A-L-PY- Site 2072
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------A A L--R-H-PF- Site 2072
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------D A L--Q-H-PY- Site 2072
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------E A L--A-H-AY- Site 2072
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 LRQLFRILFR T L--N-H-QYD Site 2012
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------E A L--A-H-AY- Site 2072
Amphimedon.queenslandica.CDK1 ---------N G M--R-H-PF- Site 2072
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------Q L L--E-S-SY- Site 2072
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------A A L--N-H-QY- Site 2072
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------A A L--K-H-GF- Site 2072
Neurospora.crassa.IME2 ---------Q A L--A-H-DY- Site 2072
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------A A M--Q-H-PY- Site 2072
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------Q G L--K-H-DW- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------R A L--Q-H-SY- Site 2072
Hydra.magnipapillata.CDK1 ---------N A M--N-H-PY- Site 2072
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------D S L--D-S-SY- Site 2072
Ashbya.gossypii.IME2 ---------D L S--Q-M-PY- Site 2072
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------E L L--T-H-PY- Site 2072
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------Q A L--R-H-PW- Site 2072
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------Q C L--C-S-PY- Site 2072
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------E A L--R-H-PY- Site 2072
Schizosaccharomyces.pombe.b.IME2 ---------Y C K----E-VF- Site 2072
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------Q A L--A-H-PY- Site 2072
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------E T L--N-H-PF- Site 2072
Schizosaccharomyces.pombe.CDK1 ---------R A L--Q-Q-NY- Site 2072
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------D S L--K-H-PF- Site 2072
Saccoglossus.kowalevskii.CDK1 ---------T A L--S-H-RY- Site 2072
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas RPVSGMERER K V--S-M-RLH Site 2482
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------E A L--Q-H-PY- Site 2072
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------T A L--A-H-PY- Site 2072
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------D V M--Q-V-TF- Site 1913
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------T A L--A-H-PY- Site 2072
Yarrowia.lipolytica.IME2 ---------D I M--Y-H-RY- Site 2072
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------N A L--E-H-KY- Site 2072
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------N A L--V-H-RF- Site 2072
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------D L L--E-H-LW- Site 2072
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------D A M--V-H-PF- Site 2072
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------E A M--C-H-PF- Site 2072
Species Residue at Site 3304
in 'msaprobs'
muscle

The residue for every species at site 3304 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------Y V V--R-H-PF- Site 2072
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------D A L--A-H-PY- Site 2072
Scheffersomyces.stipitis.SKY1 ---------G M V--N-H-PW- Site 2072
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------E A L--Q-H-PY- Site 2072

Generated by PhyloBot at 10:01, February 29th 2020
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