cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3130 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3130 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3130 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3130 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -------LQW N PDARPSAQ-- Site 2048
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -------LNY L PEKRATAK-- Site 2048
Danio.rerio.CDK1 -------LTY D PNKRISAK-- Site 2048
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -------LTF D PRKRITVE-- Site 2048
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -------LKC N PVQRICAD-- Site 2048
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -------LMP N PQSRLTAD-- Site 2048
Candida.guilliermondii.IME2 -------LRW N PETRPIAS-- Site 2048
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ QTDSYAQRPR E TVSMSLKE-- Site 2476
Chlamydomonas.reinhardtii.LF4 -------LMY N PDERLSAR-- Site 2048
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -------LTY V PSKRISAI-- Site 2048
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 IQFGRYLEIV R NLSFEETPDY Site 1904
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -------LTM D PIKRITSE-- Site 2048
Schizosaccharomyces.octosporus.b.IME2 -------LAW D PFIRPSAV-- Site 2048
Candida.albicans.MAPK3..Extracellular.signal.regul -------LIF N PAKRITVE-- Site 2048
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -------LRY D HQDRLTAK-- Site 2048
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 GFPDDYVFDW T ALTRNASSSL Site 2043
Suberites.domuncula.JNK..Stress.activated.protein. -------LQI D PQNRITVE-- Site 2048
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -------LEF D PAQRITLA-- Site 2048
Aedes.aegypti.CDK1 -------LIY D PVHRISAK-- Site 2048
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -------LEY D PAKRITLK-- Site 2048
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -------LEY E PAKRLTLG-- Site 2048
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -------LVW E PSLRMTPD-- Site 2048
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -------LTI D ADKRITPL-- Site 2048
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -------LHM D PAERQTCE-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -------FIY D PIIRISAQ-- Site 2048
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -------LRY D HQQRLTAK-- Site 2048
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -------LTF N PHKRIPVE-- Site 2048
Strongylocentrotus.purpuratus.CDK1 -------LCY E PDKRISAK-- Site 2048
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca YVYDWTLLKC K QSQKAKVQQG Site 2048
Drosophila.melanogaster.CDK1 -------LIY D PVHRISAK-- Site 2048
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 FVREGFDFDF M YDWILKKQAM Site 2039
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -------LEF A PEKRPTAQ-- Site 2048
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -------LLY E SKSRMSAE-- Site 2048
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -------LQM I PSRRVYAH-- Site 2048
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -------LII D PAKRISVD-- Site 2048
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -------LHI D PDKRPFCA-- Site 2048
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -------LII D PAKRISVD-- Site 2048
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -------LEL D VDKRLTAA-- Site 2048
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -------LVF D PSKRISAK-- Site 2048
Bombus.terrestris.CDK1 -------LTY D PNQRITAK-- Site 2048
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -------LEL I PEKRATAA-- Site 2048
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -------LQI D PDKRPSCA-- Site 2048
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -------LVI D ASKRISVD-- Site 2048
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -------LTL D PSKRCTAE-- Site 2048
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -------VAY D PDERIAAH-- Site 2048
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -------FKY V PDQRITPL-- Site 2048
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -------LQY L PEDRMKPY-- Site 2048
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -------LTI D QERRLTPA-- Site 2048
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -------LRY D HQDRLTAK-- Site 2048
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -------LVF D PSKRISAK-- Site 2048
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -------LHM D PTQRLTCE-- Site 2048
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -------LLI D ADLRITPA-- Site 2048
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -------LTY F PGRRISAE-- Site 2048
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -------LCL N PTERFLTE-- Site 2048
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -------LEY E PAKRLTLG-- Site 2048
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -------LTY F PGRRISAE-- Site 2048
Naegleria.gruberi.LF4 -------LIY N PEERITAS-- Site 2048
Saccharomyces.bayanus.IME2 -------LRW D PNERATAQ-- Site 2048
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -------LRY D HQQRLTAK-- Site 2048
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -------LLL D PESRITAA-- Site 2048
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -------LLF N PSNRISAA-- Site 2048
Dictyostelium.discoideum.DYRK1..Probable.serine.th -------LIY D PQKRITPL-- Site 2048
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -------LEY E PAARISPL-- Site 2048
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -------LEW D PAVRMTPG-- Site 2048
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -------LKL D PADRYLTE-- Site 2048
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -------LAF A PDKRLSAE-- Site 2048
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -------LVR N PRERISIA-- Site 2048
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -------LVW E PSLRMTPE-- Site 2048
Aspergillus.nidulans.IME2 -------LMW D PKNRPTSS-- Site 2048
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -------LDL N PASRITAE-- Site 2048
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -------LHF D PDKRISVE-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -------LNW D PKKRPTAS-- Site 2048
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -------LHY D PNKRISAK-- Site 2048
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -------LVI D PAKRISVD-- Site 2048
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -------LQY S PNLRCTAL-- Site 2048
Penicillium.marneffei.IME2 -------LMW D PRNRPTST-- Site 2048
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -------LVL D TDKRITAS-- Site 2048
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -------LTF N PMDRLTAE-- Site 2048
Drosophila.melanogaster.MAK -------LAY D PDKRPTAQ-- Site 2048
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -------LEL N PEKRVPPE-- Site 2048
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -------LML D PAKRISIN-- Site 2048
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -------LTL D PSKRCTAE-- Site 2048
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -------ILY D PSKRITAS-- Site 2048
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -------FMY D PKKRATSG-- Site 2048
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -------LVI D PAKRISVD-- Site 2048
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -------LVI D PDKRISVD-- Site 2048
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -------LEY D PAKRITLR-- Site 2048
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -------LDL N PASRITAE-- Site 2048
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 -------LQW S PEQRPTAQ-- Site 2048
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -------LQY D PKSRITAK-- Site 2048
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -------LEY T PSSRLSPL-- Site 2048
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -------LVV D PDKRISVD-- Site 2048
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -------LRY D HQSRLTAR-- Site 2048
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -------LEY D PAKRITLD-- Site 2048
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -------LTF N PMDRLTAE-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -------LQF E GRNRISAE-- Site 2048
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -------LRY D HQSRLTAR-- Site 2048
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -------LEY D PAKRLTAN-- Site 2048
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -------LEL D VEKRLTAT-- Site 2048
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -------LEY E PAARISPL-- Site 2048
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -------LRY D HAERLTAQ-- Site 2048
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -------LAY A PERRVKPL-- Site 2048
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -------LLY D PSSRLKPV-- Site 2048
Candida.orthopsilosis.IME2 -------LQW D PISRPTAQ-- Site 2048
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -------FTY N PCSRTTAM-- Site 2048
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -------LVI D PEKRISVD-- Site 2048
Debaryomyces.hansenii.IME2 -------LTW N PDVRADVE-- Site 2048
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -------LQY A PQKRMTAI-- Site 2048
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -------LKY D PITRIDAI-- Site 2048
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -------LRY P PEHRLTAK-- Site 2048
Caenorhabditis.briggsae.CDK1 -------LIY D PALRISSK-- Site 2048
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -------LRY D HVDRLTAR-- Site 2048
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -------LLY P PRQRIAAS-- Site 2048
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -------LQW D PSARLTPA-- Site 2048
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -------LAF N PAKRISAY-- Site 2048
Monosiga.brevicollis.CDK1 -------LVY N PAKRISAK-- Site 2048
Saccharomyces.cerevisiae.SKY1 -------LQL D PRKRADAG-- Site 2048
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -------LTF S PARRICVD-- Site 2048
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -------LYM D ADTRPPCS-- Site 2048
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -------LEY T PSARITPL-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -------LVF A PDKRLSAT-- Site 2048
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -------LHI D PDKRPFCA-- Site 2048
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -------LTY D PTKRITAS-- Site 2048
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -------LKL D PADRYLTE-- Site 2048
Ajellomyces.capsulatus.CDK1 -------LEY D PARRISAK-- Site 2048
Dictystelium.discoideum.MAPK3..Extracellular.signa -------LYF D PSKRLTVE-- Site 2048
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -------LTF N PAKRISAY-- Site 2048
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -------FMY D PKKRATAG-- Site 2048
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -------LVI D ASKRISVD-- Site 2048
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -------LEL D VDKRLTAA-- Site 2048
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -------LSY D LHLRPSAL-- Site 2048
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -------LLF D PLKRISAK-- Site 2048
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -------LVI D PAKRISVD-- Site 2048
Saccharomyces.cerevisiae.CDK1 -------LAY D PINRISAR-- Site 2048
Lodderomyces.elongisporus.IME2 -------LLW D PLARPDAN-- Site 2048
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -------LVL D TDKRITAA-- Site 2048
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -------LEY E PSKRMTLA-- Site 2048
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -------LKL D PADRYLTE-- Site 2048
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -------MKY D PNIRYSAL-- Site 2048
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -------LVL N PHNRLTAK-- Site 2048
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -------LEY D PTQRITLD-- Site 2048
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -------LTI D ADKRITPI-- Site 2048
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -------LHM D PAERLTCE-- Site 2048
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -------LEY T PSSRLSPL-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -------LIY D PSLRLNAK-- Site 2048
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -------LTF N PHKRISAF-- Site 2048
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -------FEW D PARRITAR-- Site 2048
Salmo.salar.CDK1 -------LAY D PNKRISAK-- Site 2048
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -------FTF N PCARCTAS-- Site 2048
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -------LLY P PHQRIAAS-- Site 2048
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -------LKR D PKQRISIP-- Site 2048
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -------LEY T PTARLTPL-- Site 2048
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -------LQI D PSDRITIK-- Site 1869
Aspergillus.fumigatus.IME2 -------CIF E PFRDL-VP-- Site 2046
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -------LTM D PIRRITSE-- Site 2048
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -------LEY E PSKRISLH-- Site 2048
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -------LQL D VEKRLTAT-- Site 2048
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -------LKF N PDERISVE-- Site 2048
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -------LTI D ADKRVTPI-- Site 2048
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -------LTF N PNKRITVE-- Site 2048
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -------LQY E SKKRVPAE-- Site 2048
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -------FMY D PKKRATAG-- Site 2048
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -------LRM D PAERLSCE-- Site 2048
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -------LVI D PEQRISVD-- Site 2048
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -------LAL D PEQRPTAS-- Site 2048
Candida.glabrata.IME2 -------LKW D PNERASVE-- Site 2048
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -------LNW D PKKRPTAS-- Site 2048
Schizosaccharomyces.pombe.IME2 -------LKW D PAKRPTAE-- Site 2048
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -------LIF N PAKRITVD-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -------LVC R PNQRVSAE-- Site 2048
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -------LTW E SHERISPS-- Site 2048
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -------LLY E SKSRMSAE-- Site 2048
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -------LKM N PDERLTCA-- Site 2048
Branchiostoma.floridae.CDK1 -------LLY E PNKRISAK-- Site 2048
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -------LEY E PSKRISLA-- Site 2048
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -------LQY T PTDRLTAA-- Site 2048
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -------LNL S PCARETAC-- Site 2048
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -------IEY T PTSRPTPQ-- Site 2048
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -------LQW D PKKRPTAS-- Site 2048
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -------LEF D PAQRITLA-- Site 2048
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -------LDY D PKTRIQPY-- Site 2048
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -------LHY D PNKRISAK-- Site 2048
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -------LRF E PSARVSAA-- Site 2048
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -------LVL D SDKRITAA-- Site 2048
Lachancea.thermotolerans.SKY1 -------LRL D PQERADAG-- Site 2048
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -------LTF S PMDRLTAE-- Site 2048
Dictyostelium.discoideum.CDK1 -------LQY E PSKRISAK-- Site 2048
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -------LVL D AEQRVTAA-- Site 2048
Xenopus.tropicalis.IME2 -------LQY D SNKRISAK-- Site 2048
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -------LTI D ADKRITPL-- Site 2048
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -------LRY D HQSRLTAR-- Site 2048
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -------LQY D SNKRISAK-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -------LLY D PSKRISAK-- Site 2048
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -------LKG F PRDRVSAQ-- Site 2048
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -------LQF N PDKRITAE-- Site 2048
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -------LDY D PKTRIQPY-- Site 2048
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -------LEY T PTARLTPL-- Site 2048
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -------LIY S PNARVSPL-- Site 2048
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -------LAY C PEKRITAA-- Site 2048
Encephalitozoon.cuniculi.CDK1 -------LEY D PKMRMTAK-- Site 2048
Saccharomyces.kluyveri.IME2 -------LTW D PDKRANVN-- Site 2048
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -------LEY D PARRITLD-- Site 2048
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -------LTF N PHKRIEVE-- Site 2048
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -------LKG F PRDRVSAQ-- Site 2048
Cryptococcus.neoformans.IME2 -------LRY N PKYRMTAA-- Site 2048
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -------LTW E SHERISPS-- Site 2048
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -------LEL M PEKRATAA-- Site 2048
Candida.lusitaniae.IME2 -------FLW D PDSRPTAE-- Site 2048
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -------LTI D ADKRITPL-- Site 2048
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -------LLM D PNKRITSE-- Site 2048
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -------LVY P SKQRISAR-- Site 2048
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -------LAM D PGARQSCE-- Site 2048
Gallus.gallus.CDK2 -------LHY D PNKRISAK-- Site 2048
Emericella.nidulans.CDK1 -------LEY D PARRISAK-- Site 2048
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -------VAY D PDERIAAH-- Site 2048
Homo.sapiens.CDK1 -------LIY D PAKRISGK-- Site 2048
Candida.albicans.CDK1 -------LVY D PSRRISAK-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -------LRY D HQARLTAR-- Site 2048
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -------LRF E PSARISAA-- Site 2048
Mus.musculus.ICK..Serine.threonine.protein.kinase. -------LQW D PKKRPTAS-- Site 2048
Saccharomyces.castelli.IME2 -------LRW N PLERASAN-- Site 2048
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -------LEY D PAKRLSLD-- Site 2048
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -------FLF N PCTRTTAS-- Site 2048
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -------LQC S PKNRLSAQ-- Site 2048
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -------LVY S PDVRFGGL-- Site 2048
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -------FEM D PQKRSSAE-- Site 2048
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -------FTF N PCTRTTAS-- Site 2048
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -------LVL D PAQRIDSD-- Site 2048
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -------LTI D ADKRITPI-- Site 2048
Acyrthosiphon.pisum.CDK1 -------CTY N PANRMSAE-- Site 2048
Candida.tropicalis.CDK1 -------LKW D PLARADAN-- Site 2048
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -------LLM D PNKRITSE-- Site 2048
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -------LEY T PSNRITPM-- Site 2048
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -------LRY D HYERYTAR-- Site 2048
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -------LQF E GRNRISAE-- Site 2048
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -------LRY D HQDRLTAK-- Site 2048
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -------LQY E SKKRVSAE-- Site 2048
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -------LQL D VEKRLTAT-- Site 2048
Candida.albicans.SSN3..Serine.threonine.protein.ki -------LKY D PELRLTAD-- Site 2048
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -------LAY N PDDRLSAR-- Site 2048
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -------LEY T PKSRIKPL-- Site 2048
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -------LVL D ADARLTAS-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -------LTL N PDERLSAS-- Site 2048
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -------LRY D HQTRLTAR-- Site 2048
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -------LMI D ADKRISPA-- Site 2048
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -------LTY Y PGRRINAE-- Site 2048
Candida.dubliniensis.IME2 -------LKW D PSARADAT-- Site 2048
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -------LVI D PDKRISVD-- Site 2048
Aspergillus.niger.IME2 -------LMW D PKNRPTST-- Site 2048
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -------LVL D TDKRITAA-- Site 2048
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -------LQI D PADRISSS-- Site 2048
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -------LQC S PKNRLSAQ-- Site 2048
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -------LRY D HQSRLTAR-- Site 2048
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -------LNF D PKQRILRT-- Site 2048
Schizosaccharomyces.japonicus.IME2 -------LKW D PKKRPTAS-- Site 2048
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -------LVI D PERRISVD-- Site 2048
Gallus.gallus.CDK1 -------LIY D PAKRISGK-- Site 2048
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -------LKC N PVQRISAE-- Site 2048
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -------LEY T PTEREAAV-- Site 2048
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -------LIY D PARRMGSR-- Site 2048
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -------IEY T PTSRPTPQ-- Site 2048
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -------LVL D AEQRVTAG-- Site 2048
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -------LRY D HQERLTAK-- Site 2048
Kluyveromyces.waltii.IME2 -------LTW D PKKRATVD-- Site 2048
Debaryomyces.hansenii.SKY1 -------LTL Q PELRADAG-- Site 2048
Saccharomyces.cerevisiae.IME2 -------LRW D PNERATAQ-- Site 2048
Schizosaccharomyces.japonicus.b.IME2 -------LAW N PNLRPSAK-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -------LTF S PANRISAY-- Site 2048
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -------LRY D HQQRLTAK-- Site 2048
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -------LTF S PMDRLTAE-- Site 2048
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -------LTF N PAKRISAY-- Site 2048
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -------LKY H PCERLVPL-- Site 2048
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -------LVL D AEKRITAT-- Site 2048
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -------LQI D PAERTSST-- Site 2048
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -------LVI D ASKRISVD-- Site 2048
Candida.albicans.IME2 -------LKW D PSARADAT-- Site 2048
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -------LTF S PQKRISAS-- Site 2048
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -------LEL N PEARISAS-- Site 2048
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -------LVL D SDKRITAA-- Site 2048
Kluyveromyces.lactis.IME2 -------LKW N PSERATAN-- Site 2048
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -------LRF E PSARISAA-- Site 2048
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -------LVI D PVKRISVD-- Site 2048
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -------LVL D SDQRVSAA-- Site 2048
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -------LVL D SDQRVSAA-- Site 2048
Amphimedon.queenslandica.CDK1 -------LCY E PCKRITAI-- Site 2048
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -------LKM N PDDRLTCS-- Site 2048
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -------LLY D PSKRISAK-- Site 2048
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -------LTY D PKQRLSAD-- Site 2048
Neurospora.crassa.IME2 -------LMW D PKNRPTST-- Site 2048
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -------LIC R PNQRISAE-- Site 2048
Dictyostelium.discoideum.DYRK2..Probable.serine.th -------LKW E PSQRITAE-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -------LTF N PHKRISAF-- Site 2048
Hydra.magnipapillata.CDK1 -------LLY S PASRISAK-- Site 2048
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -------FMY D PKKRATAK-- Site 2048
Ashbya.gossypii.IME2 -------LVW N PDDRATVE-- Site 2048
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -------LVR N PKERISIP-- Site 2048
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -------LHW D PSARLTPA-- Site 2048
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -------LKY D PLERFNAL-- Site 2048
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -------LLF N PDKRLSAE-- Site 2048
Schizosaccharomyces.pombe.b.IME2 -------LAW N PDVRPTAK-- Site 2048
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -------LTF N PHKRIEVE-- Site 2048
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -------LLI D ADLRITPI-- Site 2048
Schizosaccharomyces.pombe.CDK1 -------LVY D PAHRISAK-- Site 2048
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -------LEY E PARRLTLA-- Site 2048
Saccoglossus.kowalevskii.CDK1 -------LTY E PNKRMSAK-- Site 2048
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas VFDWNMLKFG A SRAADDAE-- Site 2054
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -------LVI D ASKRISVD-- Site 2048
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -------LQY D PSQRISAK-- Site 2048
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -------LHI N PSDRLAIK-- Site 1903
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -------LQY D PSQRITAK-- Site 2048
Yarrowia.lipolytica.IME2 -------LTW D PDARCSAR-- Site 2048
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -------LNY D PIKRIDAF-- Site 2048
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -------LIY D PNKRISAK-- Site 2048
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -------FEL N SYKRPSAS-- Site 2048
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -------LEY T PTERLAAI-- Site 2048
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -------LQY T PTDRLTAA-- Site 2048
Species Residue at Site 3130
in 'msaprobs'
muscle

The residue for every species at site 3130 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -------LQF D PKQRISPY-- Site 2048
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -------LVF D PSKRISAK-- Site 2048
Scheffersomyces.stipitis.SKY1 -------LTI Q PEMRADAG-- Site 2048
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -------LKC N PVQRISAE-- Site 2048

Generated by PhyloBot at 02:22, October 16th 2019
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