cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 3103 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3103 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3103 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3103 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -----PW--N G AFASM----- Site 2011
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -----QE--A K DFEAF----- Site 2011
Danio.rerio.CDK1 ------L--D E DGRDL----- Site 2011
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ------V--H P EAIDL----- Site 2011
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ------L--N A TGRDL----- Site 2011
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ------L--S E TGIDL----- Site 2011
Candida.guilliermondii.IME2 -----S---Y P FLCDM----- Site 2011
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ KIEKATGEAG G RRNLS----- Site 2276
Chlamydomonas.reinhardtii.LF4 ------V--N P ECVDL----- Site 2011
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -----NC--T K NAMDL----- Site 2011
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 --IGEKKRLT N VYDLA----- Site 1799
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ------P--D S KAFHL----- Site 2011
Schizosaccharomyces.octosporus.b.IME2 -----NC--D D MYTEM----- Site 2011
Candida.albicans.MAPK3..Extracellular.signal.regul ------I--N P LALDL----- Site 2011
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ------V--S P EAIDY----- Site 2011
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 EEKPDYDYLR S IFQAL----- Site 1944
Suberites.domuncula.JNK..Stress.activated.protein. ------K--T R HGRDL----- Site 2011
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ------E--H V QLFDL----- Site 2033
Aedes.aegypti.CDK1 ------L--D S AGLDL----- Site 2011
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ------E--H E LLFDL----- Site 2011
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ------E--H H QLFDL----- Site 2011
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ------Y--D T SFLDF----- Site 2011
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -----AD--R R EYIDL----- Site 2011
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ------I--S Y PALAL----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ------I--D E DLINL----- Site 2011
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ------V--S P EALDL----- Site 2011
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ------A--D A LALDL----- Site 2011
Strongylocentrotus.purpuratus.CDK1 ------L--N K DGKDL----- Site 2011
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca YSFLRHVFRE L FEREG----- Site 2003
Drosophila.melanogaster.CDK1 ------L--D A NGIDL----- Site 2011
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 KLKFEEKPDY Q QVISM----- Site 1936
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -----AE--A K EFAEF----- Site 2011
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ------L--D T DGIHL----- Site 2011
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ------LVFI P HAESL----- Site 2011
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ------K--A S QARDL----- Site 2011
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ------L--S E VVIDL----- Site 2011
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ------K--A S QARDL----- Site 2011
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ------A--S P QAADL----- Site 2011
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ------A--T H EAVHL----- Site 2011
Bombus.terrestris.CDK1 ------F--D S DAKDL----- Site 2011
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -----EE--A A GFTDF----- Site 2011
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ------L--S A SVLDL----- Site 2011
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ------K--A S QARDL----- Site 2011
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ------I--P S AALDL----- Site 2011
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ------L--S P QCLSL----- Site 2011
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -----PL--P A EVYDL----- Site 2011
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -----KD--A K EAYDL----- Site 2011
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -----TD--R R EFIDL----- Site 2011
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ------V--S P EAIDF----- Site 2011
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ------A--T H EAVHL----- Site 2011
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ------I--S Y PALGL----- Site 2011
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -----AD--R R EFVSL----- Site 2011
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -----LL--S D QGFDL----- Site 2011
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ------I--N G LMLDL----- Site 2011
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ------D--H H QLFDL----- Site 2011
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -----LL--S D QGFDL----- Site 2011
Naegleria.gruberi.LF4 ------V--S K DCLDL----- Site 2011
Saccharomyces.bayanus.IME2 -----SQ--L S DLSDV----- Site 2011
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ------V--S P EALDL----- Site 2011
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ------V--N P QAIKV----- Site 2011
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ------A--S D EAIDL----- Site 2011
Dictyostelium.discoideum.DYRK1..Probable.serine.th ------D--Y L KFLDL----- Site 2033
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ------D--Y L RFQDL----- Site 2033
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ------D--D P LFLDF----- Site 2011
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ------L--N S VLLDL----- Site 2011
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -----DT--P P EALDL----- Site 2012
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ------P--E K DLLDV----- Site 2011
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ------Y--D S SFLDF----- Site 2011
Aspergillus.nidulans.IME2 ----PQW--P A ALSNF----- Site 2011
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ------V--P D EAYDL----- Site 2011
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ------K--N H EAVDL----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ------A--S S EAIQL----- Site 2011
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ------L--D E DGRSL----- Site 2011
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ------K--A S QARDL----- Site 2011
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -----RM--P P EAVDL----- Site 2011
Penicillium.marneffei.IME2 ----PHW--P Q SLANF----- Site 2011
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ------A--N P LAVDL----- Site 2011
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ------V--N S EAIDF----- Site 2011
Drosophila.melanogaster.MAK ------C--S Q NGLDL----- Site 2011
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ------I--R Q ELMDL----- Site 2011
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ------K--V H QLKDL----- Site 2011
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ------I--P S AALDL----- Site 2011
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ------E--N S QAYDL----- Site 1946
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ------L--S E AGLRL----- Site 2011
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ------K--A S QARDL----- Site 2011
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ------K--T S QARDL----- Site 2011
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ------E--H E RLFDL----- Site 2011
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ------V--P D EAYDL----- Site 2011
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 -----A---G R ELCEV----- Site 2011
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ------R--D P QGLDL----- Site 2011
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -----RT--P P EAIAL----- Site 2011
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ------K--T S QARDL----- Site 2011
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ------V--S P EALDF----- Site 2011
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ------A--R L HLFDL----- Site 1992
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ------V--N S EAIDF----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ------L--D S DGADL----- Site 2011
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ------V--S P EALDF----- Site 2011
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ------T--N Q KGFQL----- Site 2011
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ------A--S D LAVDL----- Site 2011
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ------D--Y L RFQDL----- Site 2033
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ------V--T P EALDF----- Site 2011
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -----KT--P E DAMDF----- Site 2011
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ----KDV--P A ESIDL----- Site 2011
Candida.orthopsilosis.IME2 -----A---G R ELCDA----- Site 2011
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ------A--G D DLLEL----- Site 2011
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ------T--A A KARDL----- Site 2011
Debaryomyces.hansenii.IME2 -----S---V S ELGEV----- Site 2011
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -----RM--P P DAVDL----- Site 2011
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ------R--D K AALSL----- Site 2011
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ------L--T G HGLDI----- Site 2011
Caenorhabditis.briggsae.CDK1 ------M--D E DAFSL----- Site 2011
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ------V--S P EALDF----- Site 2011
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ------A--S P QALDL----- Site 2011
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ------G--D Y LFIEF----- Site 2011
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ------I--D D MGKDL----- Site 2011
Monosiga.brevicollis.CDK1 ------L--D E DGIDL----- Site 2011
Saccharomyces.cerevisiae.SKY1 -----DE--A K EISDF----- Site 2011
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ------A--N P LGLDL----- Site 2011
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ------L--P P LLLDL----- Site 2011
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -----RT--P T EAINL----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -----DT--S P EALDL----- Site 2011
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ------L--P E AVISL----- Site 2011
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ------I--S D TAFDL----- Site 2011
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ------L--N S VLLDL----- Site 2011
Ajellomyces.capsulatus.CDK1 ------L--E R NGLDL----- Site 2011
Dictystelium.discoideum.MAPK3..Extracellular.signa ------A--N P DAIDL----- Site 2011
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ------I--D E LGKDL----- Site 2011
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ------L--S E AGLRL----- Site 2011
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ------K--A S QARDL----- Site 2011
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ------A--S P QAADL----- Site 2011
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ------L--C K YADDL----- Site 1945
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ------A--T H EAVHL----- Site 2011
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ------K--A S QARDL----- Site 2011
Saccharomyces.cerevisiae.CDK1 ------L--D P RGIDL----- Site 2011
Lodderomyces.elongisporus.IME2 -----IK--D N SLRQV----- Site 2011
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ------A--N P QAVDL----- Site 2011
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ------E--H H QLFSL----- Site 2011
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ------L--S G VLLDL----- Site 2011
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ------E--T Q ETIDL----- Site 2011
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ------C--C D DGISL----- Site 2011
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ------E--H E KLFDL----- Site 2011
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -----AD--R R EFIDL----- Site 2011
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ------I--S Y SALGF----- Site 2011
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ----SKT--P P EAIAL----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ------L--D D TAFSL----- Site 2011
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ------M--E E SGAQL----- Site 2011
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ------N--S S EGYDI----- Site 2006
Salmo.salar.CDK1 ------L--D D DGREL----- Site 2011
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ------A--G D DLLEL----- Site 2011
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ------V--S P QALDL----- Site 2011
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ------P--E K DLQDV----- Site 2011
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -----RT--P P EAIAL----- Site 2011
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------V E TFRNL----- Site 1853
Aspergillus.fumigatus.IME2 ----NVG--R T DGASFYGEHP Site 1999
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ------P--D S KAFHL----- Site 2011
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ------E--H H HFFDL----- Site 2011
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ------A--N P QAVDL----- Site 2011
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ------T--T D DAVDL----- Site 2011
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -----AD--R R EFIDL----- Site 2011
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ------S--D S KALDL----- Site 2011
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ------L--D S EGIEL----- Site 2011
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ------L--S E AGLRL----- Site 2011
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ------L--S Y QALSL----- Site 2011
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ------K--A S DARNL----- Site 2011
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ------A--N P IAIDL----- Site 2011
Candida.glabrata.IME2 -----NQ--L T DLLAV----- Site 2011
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ------A--S N EAIQL----- Site 2011
Schizosaccharomyces.pombe.IME2 -----PW--N L AFASM----- Site 2011
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P INPNVQI--N P LAIDL----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ------L--S S KGRDL----- Site 2011
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -----AD--L K SMVEL----- Site 2033
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ------L--D T EGINL----- Site 2011
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ------V--Q P VALSF----- Site 2011
Branchiostoma.floridae.CDK1 ------L--E P EGTEL----- Site 2011
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ------D--H H RLFDL----- Site 2011
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -----SV--P L DALDL----- Site 2011
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ------N--L P VELEF----- Site 2011
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -----HT--P A EAIDL----- Site 2011
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ------A--S S EAVQL----- Site 2011
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ------E--H V QLFDL----- Site 2011
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ------D--Y L KFKDL----- Site 2033
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ------L--D E DGRSL----- Site 2011
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ------A--D R QALSL----- Site 2011
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ------A--N P LAVDL----- Site 2011
Lachancea.thermotolerans.SKY1 -----ED--A E TISDF----- Site 2011
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ------I--S R EALDF----- Site 2011
Dictyostelium.discoideum.CDK1 ------C--E P LALDL----- Site 2011
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ------A--S P QAVNL----- Site 2011
Xenopus.tropicalis.IME2 ------L--D D DGRDL----- Site 2011
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -----AD--R R EYIDL----- Site 2011
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ------V--S P EALDF----- Site 2011
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ------L--D E DGRDL----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ------L--D R HGRDL----- Site 2011
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ----LGG--V P EAEDL----- Site 2011
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ------A--S V DALDL----- Site 2011
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ------D--Y L KFKDL----- Site 2033
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -----RT--P P EAIAL----- Site 2011
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -----RT--P A EAIDL----- Site 2011
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ------W-NS D AGFRL----- Site 2012
Encephalitozoon.cuniculi.CDK1 ------G--D P DFVDL----- Site 2011
Saccharomyces.kluyveri.IME2 -----PL--L R KLCEV----- Site 2011
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ------E--H E KLFDL----- Site 2011
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ------A--D S KALDL----- Site 2011
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ----LGR--V P EAEDL----- Site 2011
Cryptococcus.neoformans.IME2 -----SV--P Q SLVDC----- Site 2011
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -----AD--L K SMVEL----- Site 2033
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -----EE--A A GFTDF----- Site 2033
Candida.lusitaniae.IME2 -----S---Y H ELAET----- Site 2011
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -----AD--R R EYIDL----- Site 2011
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ------P--D S KAFHL----- Site 2011
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ------T--S P QAVDL----- Site 2011
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ------I--S S QALSL----- Site 2011
Gallus.gallus.CDK2 ------L--D E EGRKL----- Site 2011
Emericella.nidulans.CDK1 ------L--E E DGLDL----- Site 2011
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ------L--S P QCLSL----- Site 2011
Homo.sapiens.CDK1 ------L--D E NGLDL----- Site 2011
Candida.albicans.CDK1 ------L--D A NGIDL----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ------V--S T EALDF----- Site 2011
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ------A--D R QALSL----- Site 2011
Mus.musculus.ICK..Serine.threonine.protein.kinase. ------A--S S EAIQL----- Site 2011
Saccharomyces.castelli.IME2 -----PE--L Y DLLDV----- Site 2011
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ------D--H D QLFDL----- Site 2011
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ------A--G D DLLEL----- Site 2011
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ----LSY--V N HAEDL----- Site 2011
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -----RL--K D EALDL----- Site 2011
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ------D--H Y WCFQV----- Site 2033
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ------A--G D DLLEL----- Site 2011
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ------R--D P YALDL----- Site 2011
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -----AD--R R EFIDL----- Site 2011
Acyrthosiphon.pisum.CDK1 ------L-SD K NQQNV----- Site 2011
Candida.tropicalis.CDK1 -----PD--G N ALQDV----- Site 2011
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ------P--D S KAFHL----- Site 2011
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -----RT--S P EAIDL----- Site 2011
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ------V--S P EALDF----- Site 2011
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ------L--D S DGADL----- Site 2011
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ------V--S P EAIDF----- Site 2011
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ------L--D S EGIEL----- Site 2011
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ------A--N P QAVDL----- Site 2011
Candida.albicans.SSN3..Serine.threonine.protein.ki ------N--S E KCLEL----- Site 2006
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ------A--P P ECVDL----- Site 2011
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -----RT--P A DAIQL----- Site 2011
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ------A--S K KAVEL----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ------F--G K EMTSL----- Site 2011
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ------V--S P EALDF----- Site 2011
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -----AD--R R EFVAL----- Site 2011
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -----LL--S D QGFDL----- Site 2011
Candida.dubliniensis.IME2 -----PD--S L ALIEV----- Site 2011
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ------K--T S QARDL----- Site 2011
Aspergillus.niger.IME2 ----PQW--P A ALSQF----- Site 2011
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ------A--N P QAVDL----- Site 2011
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ------L--N G LLADI----- Site 2011
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ----LSY--V N HAEDL----- Site 2011
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ------V--S P EALDF----- Site 2011
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ------D--Y S KFKDL----- Site 2011
Schizosaccharomyces.japonicus.IME2 -----PW--N N TFASM----- Site 2011
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ------T--G A QARDL----- Site 2011
Gallus.gallus.CDK1 ------L--D E DGLDL----- Site 2011
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ------L--N A TGRDL----- Site 2011
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ------A--D A NAIDL----- Site 2011
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ------M--S A AALDF----- Site 2011
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -----HT--P A EAIDL----- Site 2011
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ------A--S P LAVNL----- Site 2011
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ------A--V P EVVDL----- Site 2011
Kluyveromyces.waltii.IME2 -----PH--L Q ELCEV----- Site 2011
Debaryomyces.hansenii.SKY1 -----AD--A V EIADF----- Site 2011
Saccharomyces.cerevisiae.IME2 -----SQ--L S DLSEV----- Site 2011
Schizosaccharomyces.japonicus.b.IME2 -----EW--H G AHSKM----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ------I--D E QGKDL----- Site 2011
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ------V--S P EVLDL----- Site 2011
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ------I--S R EALDF----- Site 2011
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ------I--D E LGKDL----- Site 2011
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ------E--D P DTLDL----- Site 2011
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ------A--N P LAVNI----- Site 2011
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ------L--N G LLADI----- Site 2011
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ------K--A S QARDL----- Site 2011
Candida.albicans.IME2 -----PD--S L ALIEV----- Site 2011
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ------I--D A MGADL----- Site 2011
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ------I--T D NAFDL----- Site 2011
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ------A--N P LAVDL----- Site 2011
Kluyveromyces.lactis.IME2 -----PQ--L E DLYDV----- Site 2011
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ------A--D R QALSL----- Site 2011
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ------K--A S QARDL----- Site 2011
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ------A--N P LAIDL----- Site 2011
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ------A--N P LAIDL----- Site 2011
Amphimedon.queenslandica.CDK1 ------L--D T LGINL----- Site 2011
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ------V--H P VALNF----- Site 2011
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ------L--D R DGRDL----- Site 2011
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ------T--S E MGLSL----- Site 2011
Neurospora.crassa.IME2 ----PQW--P A SLAHF----- Site 2011
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ------L--N S KGRDL----- Site 2011
Dictyostelium.discoideum.DYRK2..Probable.serine.th ------G--D E DFDNF----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ------M--E E SGAQL----- Site 2011
Hydra.magnipapillata.CDK1 ------L--D E NGIDL----- Site 2011
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ------L--S E AGLRL----- Site 2011
Ashbya.gossypii.IME2 -----PQ--L E SLCDV----- Site 2011
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ------S--E K DLRDV----- Site 2011
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ------D--D Y LFIEF----- Site 2011
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ------E--D D QTVEF----- Site 2011
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -----SV--P P DALDL----- Site 2011
Schizosaccharomyces.pombe.b.IME2 -----NC--P E GHAKM----- Site 2011
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ------A--D S KALDL----- Site 2011
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -----AD--R R EFVNL----- Site 2011
Schizosaccharomyces.pombe.CDK1 ------G--E E DAIEL----- Site 2011
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ------E--H H QLFDL----- Site 2011
Saccoglossus.kowalevskii.CDK1 ------L--D M DGLDL----- Site 2011
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas SYLRQLFRNL F HRQGF----- Site 2010
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ------K--A S QARDL----- Site 2011
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ------L--G P EGKDL----- Site 2011
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------T D VYYLL----- Site 1880
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ------L--E P EGRDL----- Site 2011
Yarrowia.lipolytica.IME2 -----PE--H A SLTDV----- Site 2011
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ------R--D K HALSL----- Site 2011
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ------L--D E DGRDL----- Site 2011
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ------D--H F WCFDL----- Site 2033
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ------A--D A DAIDL----- Site 2011
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -----SV--P L DALDL----- Site 2011
Species Residue at Site 3103
in 'msaprobs'
muscle

The residue for every species at site 3103 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ------D--Y S KFKDL----- Site 2012
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ------A--T H EAVHL----- Site 2011
Scheffersomyces.stipitis.SKY1 -----QD--A M DVADF----- Site 2011
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ------L--N A TGRDL----- Site 2011

Generated by PhyloBot at 15:42, October 23rd 2019
Questions/Comments? help@phylobot.com