cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3101 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3101 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3101 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3101 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -P-----PW- - NGAFASM---  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -I-----QE- - AKDFEAF---  
Danio.rerio.CDK1 -P------L- - DEDGRDL---  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -H------V- - HPEAIDL---  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -K------L- - NATGRDL---  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -T------L- - SETGIDL---  
Candida.guilliermondii.IME2 -H-----S-- - YPFLCDM---  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ MDKIEKATGE A GGRRNLS--- Site 2274
Chlamydomonas.reinhardtii.LF4 -H------V- - NPECVDL---  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -H-----NC- - TKNAMDL---  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ----IGEKKR L TNVYDLA--- Site 1797
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -K------P- - DSKAFHL---  
Schizosaccharomyces.octosporus.b.IME2 -A-----NC- - DDMYTEM---  
Candida.albicans.MAPK3..Extracellular.signal.regul -N------I- - NPLALDL---  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. HL------V- - SPEAIDY---  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 KFEEKPDYDY L RSIFQAL--- Site 1942
Suberites.domuncula.JNK..Stress.activated.protein. -A------K- - TRHGRDL---  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -L------E- - HVQLFDL---  
Aedes.aegypti.CDK1 -N------L- - DSAGLDL---  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -A------E- - HELLFDL---  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -E------E- - HHQLFDL---  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -T------Y- - DTSFLDF---  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -K-----AD- - RREYIDL---  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -S------I- - SYPALAL---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --------I- - DEDLINL---  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. HL------V- - SPEALDL---  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -N------A- - DALALDL---  
Strongylocentrotus.purpuratus.CDK1 -M------L- - NKDGKDL---  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca PDYSFLRHVF R ELFEREG--- Site 2001
Drosophila.melanogaster.CDK1 -N------L- - DANGIDL---  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 SRKLKFEEKP D YQQVISM--- Site 1933
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -E-----AE- - AKEFAEF---  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -R------L- - DTDGIHL---  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -K------LV F IPHAESL--- Site 2006
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -L------K- - ASQARDL---  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -K------L- - SEVVIDL---  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -L------K- - ASQARDL---  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -R------A- - SPQAADL---  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -Q------A- - THEAVHL---  
Bombus.terrestris.CDK1 -S------F- - DSDAKDL---  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -Q-----EE- - AAGFTDF---  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -K------L- - SASVLDL---  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -L------K- - ASQARDL---  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -F------I- - PSAALDL---  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -N------L- - SPQCLSL---  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -Q-----PL- - PAEVYDL---  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G SL-----KD- - AKEAYDL---  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -K-----TD- - RREFIDL---  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C HL------V- - SPEAIDF---  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -Q------A- - THEAVHL---  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -N------I- - SYPALGL---  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -K-----AD- - RREFVSL---  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -A-----LL- - SDQGFDL---  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -I------I- - NGLMLDL---  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -E------D- - HHQLFDL---  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -A-----LL- - SDQGFDL---  
Naegleria.gruberi.LF4 -N------V- - SKDCLDL---  
Saccharomyces.bayanus.IME2 -S-----SQ- - LSDLSDV---  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. HL------V- - SPEALDL---  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -N------V- - NPQAIKV---  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -A------A- - SDEAIDL---  
Dictyostelium.discoideum.DYRK1..Probable.serine.th -V------D- - YLKFLDL---  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -A------D- - YLRFQDL---  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -C------D- - DPLFLDF---  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -I------L- - NSVLLDL---  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -P-----DT- - PPEALDL---  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific --------P- - EKDLLDV---  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -T------Y- - DSSFLDF---  
Aspergillus.nidulans.IME2 -A----PQW- - PAALSNF---  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi DS------V- - PDEAYDL---  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -D------K- - NHEAVDL---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -N------A- - SSEAIQL---  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -P------L- - DEDGRSL---  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -L------K- - ASQARDL---  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -K-----RM- - PPEAVDL---  
Penicillium.marneffei.IME2 -G----PHW- - PQSLANF---  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -G------A- - NPLAVDL---  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -E------V- - NSEAIDF---  
Drosophila.melanogaster.MAK -R------C- - SQNGLDL---  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -I------I- - RQELMDL---  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -K------K- - VHQLKDL---  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -F------I- - PSAALDL---  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -D------E- - NSQAYDL---  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -W------L- - SEAGLRL---  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -L------K- - ASQARDL---  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -I------K- - TSQARDL---  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -V------E- - HERLFDL---  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis NE------V- - PDEAYDL---  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 -D-----A-- - GRELCEV---  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -N------R- - DPQGLDL---  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -S-----RT- - PPEAIAL---  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -L------K- - TSQARDL---  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki HL------V- - SPEALDF---  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -S------A- - RLHLFDL---  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -D------V- - NSEAIDF---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -R------L- - DSDGADL---  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. HL------V- - SPEALDF---  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -G------T- - NQKGFQL---  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -N------A- - SDLAVDL---  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -A------D- - YLRFQDL---  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE HL------V- - TPEALDF---  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -S-----KT- - PEDAMDF---  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -A----KDV- - PAESIDL---  
Candida.orthopsilosis.IME2 -D-----A-- - GRELCDA---  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -A------A- - GDDLLEL---  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -L------T- - AAKARDL---  
Debaryomyces.hansenii.IME2 -D-----S-- - VSELGEV---  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -K-----RM- - PPDAVDL---  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -G------R- - DKAALSL---  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -C------L- - TGHGLDI---  
Caenorhabditis.briggsae.CDK1 -L------M- - DEDAFSL---  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO HL------V- - SPEALDF---  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -D------A- - SPQALDL---  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -C------G- - DYLFIEF---  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -D------I- - DDMGKDL---  
Monosiga.brevicollis.CDK1 -N------L- - DEDGIDL---  
Saccharomyces.cerevisiae.SKY1 -K-----DE- - AKEISDF---  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -G------A- - NPLGLDL---  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -R------L- - PPLLLDL---  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -I-----RT- - PTEAINL---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -P-----DT- - SPEALDL---  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -K------L- - PEAVISL---  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -T------I- - SDTAFDL---  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -I------L- - NSVLLDL---  
Ajellomyces.capsulatus.CDK1 -G------L- - ERNGLDL---  
Dictystelium.discoideum.MAPK3..Extracellular.signa -K------A- - NPDAIDL---  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -D------I- - DELGKDL---  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -W------L- - SEAGLRL---  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -L------K- - ASQARDL---  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -R------A- - SPQAADL---  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -H------L- - CKYADDL---  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -E------A- - THEAVHL---  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -L------K- - ASQARDL---  
Saccharomyces.cerevisiae.CDK1 -S------L- - DPRGIDL---  
Lodderomyces.elongisporus.IME2 -C-----IK- - DNSLRQV---  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -G------A- - NPQAVDL---  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -E------E- - HHQLFSL---  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -I------L- - SGVLLDL---  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -K------E- - TQETIDL---  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -N------C- - CDDGISL---  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -E------E- - HEKLFDL---  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -K-----AD- - RREFIDL---  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -N------I- - SYSALGF---  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -S----SKT- - PPEAIAL---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -L------L- - DDTAFSL---  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -E------M- - EESGAQL---  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -S------N- - SSEGYDI---  
Salmo.salar.CDK1 -P------L- - DDDGREL---  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -A------A- - GDDLLEL---  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -D------V- - SPQALDL---  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi --------P- - EKDLQDV---  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -P-----RT- - PPEAIAL---  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -D-------- - VETFRNL---  
Aspergillus.fumigatus.IME2 -A----NVG- - RTDGASFYGE  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -K------P- - DSKAFHL---  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -R------E- - HHHFFDL---  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -T------A- - NPQAVDL---  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -Q------T- - TDDAVDL---  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -K-----AD- - RREFIDL---  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -K------S- - DSKALDL---  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -R------L- - DSEGIEL---  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -W------L- - SEAGLRL---  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -N------L- - SYQALSL---  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -R------K- - ASDARNL---  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -N------A- - NPIAIDL---  
Candida.glabrata.IME2 -S-----NQ- - LTDLLAV---  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -N------A- - SNEAIQL---  
Schizosaccharomyces.pombe.IME2 -P-----PW- - NLAFASM---  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -NINPNVQI- - NPLAIDL---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -R------L- - SSKGRDL---  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -H-----AD- - LKSMVEL---  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -R------L- - DTEGINL---  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -N------V- - QPVALSF---  
Branchiostoma.floridae.CDK1 -S------L- - EPEGTEL---  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -E------D- - HHRLFDL---  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -R-----SV- - PLDALDL---  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -R------N- - LPVELEF---  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -V-----HT- - PAEAIDL---  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -N------A- - SSEAVQL---  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -L------E- - HVQLFDL---  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -A------D- - YLKFKDL---  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -P------L- - DEDGRSL---  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -G------A- - DRQALSL---  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -G------A- - NPLAVDL---  
Lachancea.thermotolerans.SKY1 -A-----ED- - AETISDF---  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -G------I- - SREALDF---  
Dictyostelium.discoideum.CDK1 -R------C- - EPLALDL---  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -N------A- - SPQAVNL---  
Xenopus.tropicalis.IME2 -P------L- - DDDGRDL---  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -K-----AD- - RREYIDL---  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. HL------V- - SPEALDF---  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -P------L- - DEDGRDL---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -N------L- - DRHGRDL---  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -R----LGG- - VPEAEDL---  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -S------A- - SVDALDL---  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -A------D- - YLKFKDL---  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -P-----RT- - PPEAIAL---  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -I-----RT- - PAEAIDL---  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -W------W- N SDAGFRL--- Site 2010
Encephalitozoon.cuniculi.CDK1 --------G- - DPDFVDL---  
Saccharomyces.kluyveri.IME2 -N-----PL- - LRKLCEV---  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -E------E- - HEKLFDL---  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -N------A- - DSKALDL---  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -R----LGR- - VPEAEDL---  
Cryptococcus.neoformans.IME2 -D-----SV- - PQSLVDC---  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -H-----AD- - LKSMVEL---  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -Q-----EE- - AAGFTDF---  
Candida.lusitaniae.IME2 -S-----S-- - YHELAET---  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -K-----AD- - RREYIDL---  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -K------P- - DSKAFHL---  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -D------T- - SPQAVDL---  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -N------I- - SSQALSL---  
Gallus.gallus.CDK2 -P------L- - DEEGRKL---  
Emericella.nidulans.CDK1 -G------L- - EEDGLDL---  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -N------L- - SPQCLSL---  
Homo.sapiens.CDK1 -N------L- - DENGLDL---  
Candida.albicans.CDK1 -S------L- - DANGIDL---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca HL------V- - STEALDF---  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -G------A- - DRQALSL---  
Mus.musculus.ICK..Serine.threonine.protein.kinase. -N------A- - SSEAIQL---  
Saccharomyces.castelli.IME2 -L-----PE- - LYDLLDV---  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -L------D- - HDQLFDL---  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -A------A- - GDDLLEL---  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -K----LSY- - VNHAEDL---  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -K-----RL- - KDEALDL---  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS WS------D- - HYWCFQV---  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -A------A- - GDDLLEL---  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho YV------R- - DPYALDL---  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -K-----AD- - RREFIDL---  
Acyrthosiphon.pisum.CDK1 -E------L- S DKNQQNV--- Site 2006
Candida.tropicalis.CDK1 -H-----PD- - GNALQDV---  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -K------P- - DSKAFHL---  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -P-----RT- - SPEAIDL---  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR HL------V- - SPEALDF---  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -R------L- - DSDGADL---  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 HL------V- - SPEAIDF---  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -R------L- - DSEGIEL---  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -K------A- - NPQAVDL---  
Candida.albicans.SSN3..Serine.threonine.protein.ki -Q------N- - SEKCLEL---  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -H------A- - PPECVDL---  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -T-----RT- - PADAIQL---  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -R------A- - SKKAVEL---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -T------F- - GKEMTSL---  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei HL------V- - SPEALDF---  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -K-----AD- - RREFVAL---  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -A-----LL- - SDQGFDL---  
Candida.dubliniensis.IME2 -H-----PD- - SLALIEV---  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -I------K- - TSQARDL---  
Aspergillus.niger.IME2 -A----PQW- - PAALSQF---  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -G------A- - NPQAVDL---  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -K------L- - NGLLADI---  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -K----LSY- - VNHAEDL---  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein HL------V- - SPEALDF---  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -E------D- - YSKFKDL---  
Schizosaccharomyces.japonicus.IME2 -P-----PW- - NNTFASM---  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -L------T- - GAQARDL---  
Gallus.gallus.CDK1 -N------L- - DEDGLDL---  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -K------L- - NATGRDL---  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -K------A- - DANAIDL---  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -G------M- - SAAALDF---  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -V-----HT- - PAEAIDL---  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -N------A- - SPLAVNL---  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ KL------A- - VPEVVDL---  
Kluyveromyces.waltii.IME2 -N-----PH- - LQELCEV---  
Debaryomyces.hansenii.SKY1 -L-----AD- - AVEIADF---  
Saccharomyces.cerevisiae.IME2 -S-----SQ- - LSDLSEV---  
Schizosaccharomyces.japonicus.b.IME2 -D-----EW- - HGAHSKM---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -G------I- - DEQGKDL---  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein HL------V- - SPEVLDL---  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -G------I- - SREALDF---  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -D------I- - DELGKDL---  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -A------E- - DPDTLDL---  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -Y------A- - NPLAVNI---  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -K------L- - NGLLADI---  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -L------K- - ASQARDL---  
Candida.albicans.IME2 -H-----PD- - SLALIEV---  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -E------I- - DAMGADL---  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -H------I- - TDNAFDL---  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -G------A- - NPLAVDL---  
Kluyveromyces.lactis.IME2 -N-----PQ- - LEDLYDV---  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -G------A- - DRQALSL---  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -L------K- - ASQARDL---  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -G------A- - NPLAIDL---  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -G------A- - NPLAIDL---  
Amphimedon.queenslandica.CDK1 -S------L- - DTLGINL---  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -D------V- - HPVALNF---  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -N------L- - DRDGRDL---  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -K------T- - SEMGLSL---  
Neurospora.crassa.IME2 -T----PQW- - PASLAHF---  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -R------L- - NSKGRDL---  
Dictyostelium.discoideum.DYRK2..Probable.serine.th -S------G- - DEDFDNF---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -E------M- - EESGAQL---  
Hydra.magnipapillata.CDK1 -M------L- - DENGIDL---  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -W------L- - SEAGLRL---  
Ashbya.gossypii.IME2 -N-----PQ- - LESLCDV---  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi --------S- - EKDLRDV---  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -C------D- - DYLFIEF---  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -K------E- - DDQTVEF---  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -A-----SV- - PPDALDL---  
Schizosaccharomyces.pombe.b.IME2 -Q-----NC- - PEGHAKM---  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -N------A- - DSKALDL---  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -K-----AD- - RREFVNL---  
Schizosaccharomyces.pombe.CDK1 -N------G- - EEDAIEL---  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -E------E- - HHQLFDL---  
Saccoglossus.kowalevskii.CDK1 -S------L- - DMDGLDL---  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas DYSYLRQLFR N LFHRQGF--- Site 2005
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -L------K- - ASQARDL---  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -S------L- - GPEGKDL---  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -G-------- - TDVYYLL---  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -N------L- - EPEGRDL---  
Yarrowia.lipolytica.IME2 -N-----PE- - HASLTDV---  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -G------R- - DKHALSL---  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -P------L- - DEDGRDL---  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K WD------D- - HFWCFDL---  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -K------A- - DADAIDL---  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -R-----SV- - PLDALDL---  
Species Residue at Site 3101
in 'msaprobs'
muscle

The residue for every species at site 3101 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -E------D- - YSKFKDL---  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -Q------A- - THEAVHL---  
Scheffersomyces.stipitis.SKY1 -M-----QD- - AMDVADF---  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -K------L- - NATGRDL---  

Generated by PhyloBot at 03:03, October 16th 2019
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