cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3099 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3099 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3099 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3099 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---P-----P W --NGAFASM- Site 2006
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---I-----Q E --AKDFEAF- Site 2006
Danio.rerio.CDK1 ---P------ L --DEDGRDL- Site 2006
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---H------ V --HPEAIDL- Site 2006
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---K------ L --NATGRDL- Site 2006
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---T------ L --SETGIDL- Site 2006
Candida.guilliermondii.IME2 ---H-----S - --YPFLCDM-  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ PSMDKIEKAT G EAGGRRNLS- Site 2272
Chlamydomonas.reinhardtii.LF4 ---H------ V --NPECVDL- Site 2006
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---H-----N C --TKNAMDL- Site 2006
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ------IGEK K RLTNVYDLA- Site 1795
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---K------ P --DSKAFHL- Site 2009
Schizosaccharomyces.octosporus.b.IME2 ---A-----N C --DDMYTEM- Site 2006
Candida.albicans.MAPK3..Extracellular.signal.regul RT-N------ I --NPLALDL- Site 2006
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. NRHL------ V --SPEAIDY- Site 1946
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 SLKFEEKPDY D YLRSIFQAL- Site 1940
Suberites.domuncula.JNK..Stress.activated.protein. DK-A------ K --TRHGRDL- Site 2006
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---L------ E --HVQLFDL- Site 2031
Aedes.aegypti.CDK1 ---N------ L --DSAGLDL- Site 1946
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---A------ E --HELLFDL- Site 2006
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---E------ E --HHQLFDL- Site 2006
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---T------ Y --DTSFLDF- Site 2006
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---K-----A D --RREYIDL- Site 2006
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---S------ I --SYPALAL- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- I --DEDLINL- Site 2006
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. NRHL------ V --SPEALDL- Site 1946
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---N------ A --DALALDL- Site 2006
Strongylocentrotus.purpuratus.CDK1 ---M------ L --NKDGKDL- Site 2006
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca QRPDYSFLRH V FRELFEREG- Site 1945
Drosophila.melanogaster.CDK1 ---N------ L --DANGIDL- Site 1946
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 NYSRKLKFEE K PDYQQVISM- Site 1911
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---E-----A E --AKEFAEF- Site 2006
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---R------ L --DTDGIHL- Site 2006
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---K------ L VFIPHAESL- Site 1945
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET NK-L------ K --ASQARDL- Site 2006
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---K------ L --SEVVIDL- Site 2006
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U NK-L------ K --ASQARDL- Site 2006
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---R------ A --SPQAADL- Site 2006
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---Q------ A --THEAVHL- Site 2006
Bombus.terrestris.CDK1 ---S------ F --DSDAKDL- Site 2006
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---Q-----E E --AAGFTDF- Site 2006
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---K------ L --SASVLDL- Site 2006
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. NK-L------ K --ASQARDL- Site 2006
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---F------ I --PSAALDL- Site 2006
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---N------ L --SPQCLSL- Site 2006
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---Q-----P L --PAEVYDL- Site 2006
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G DHSL-----K D --AKEAYDL- Site 2006
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---K-----T D --RREFIDL- Site 2006
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C NQHL------ V --SPEAIDF- Site 1946
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---Q------ A --THEAVHL- Site 2006
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---N------ I --SYPALGL- Site 2006
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---K-----A D --RREFVSL- Site 2006
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---A-----L L --SDQGFDL- Site 2006
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---I------ I --NGLMLDL- Site 1946
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---E------ D --HHQLFDL- Site 2006
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---A-----L L --SDQGFDL- Site 2006
Naegleria.gruberi.LF4 ---N------ V --SKDCLDL- Site 2006
Saccharomyces.bayanus.IME2 ---S-----S Q --LSDLSDV- Site 2006
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. NRHL------ V --SPEALDL- Site 1946
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---N------ V --NPQAIKV- Site 2006
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---A------ A --SDEAIDL- Site 2006
Dictyostelium.discoideum.DYRK1..Probable.serine.th -L-V------ D --YLKFLDL- Site 2031
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -P-A------ D --YLRFQDL- Site 2031
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -G-C------ D --DPLFLDF- Site 2006
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---I------ L --NSVLLDL- Site 1946
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---P-----D T --PPEALDL- Site 2010
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- P --EKDLLDV- Site 1872
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---T------ Y --DSSFLDF- Site 2006
Aspergillus.nidulans.IME2 ---A----PQ W --PAALSNF- Site 2006
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi GWDS------ V --PDEAYDL- Site 2006
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---D------ K --NHEAVDL- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---N------ A --SSEAIQL- Site 2006
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---P------ L --DEDGRSL- Site 2006
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. NK-L------ K --ASQARDL- Site 2006
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---K-----R M --PPEAVDL- Site 2006
Penicillium.marneffei.IME2 ---G----PH W --PQSLANF- Site 2006
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---G------ A --NPLAVDL- Site 2006
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---E------ V --NSEAIDF- Site 2006
Drosophila.melanogaster.MAK ---R------ C --SQNGLDL- Site 2006
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -F-I------ I --RQELMDL- Site 2009
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -R-K------ K --VHQLKDL- Site 2006
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---F------ I --PSAALDL- Site 2006
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---D------ E --NSQAYDL- Site 1944
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---W------ L --SEAGLRL- Site 2006
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin NK-L------ K --ASQARDL- Site 2006
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a DK-I------ K --TSQARDL- Site 2006
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---V------ E --HERLFDL- Site 2006
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis GWNE------ V --PDEAYDL- Site 2006
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---D-----A - --GRELCEV-  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---N------ R --DPQGLDL- Site 2006
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---S-----R T --PPEAIAL- Site 2006
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. DK-L------ K --TSQARDL- Site 2006
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki NQHL------ V --SPEALDF- Site 1946
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---S------ A --RLHLFDL- Site 1990
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---D------ V --NSEAIDF- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---R------ L --DSDGADL- Site 2006
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. NQHL------ V --SPEALDF- Site 1946
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---G------ T --NQKGFQL- Site 2006
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---N------ A --SDLAVDL- Site 2006
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -P-A------ D --YLRFQDL- Site 2031
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE NQHL------ V --TPEALDF- Site 1946
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---S-----K T --PEDAMDF- Site 2006
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---A----KD V --PAESIDL- Site 2006
Candida.orthopsilosis.IME2 ---D-----A - --GRELCDA-  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---A------ A --GDDLLEL- Site 2006
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str AR-L------ T --AAKARDL- Site 2006
Debaryomyces.hansenii.IME2 ---D-----S - --VSELGEV-  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---K-----R M --PPDAVDL- Site 2006
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---G------ R --DKAALSL- Site 2006
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---C------ L --TGHGLDI- Site 2006
Caenorhabditis.briggsae.CDK1 ---L------ M --DEDAFSL- Site 2006
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO NQHL------ V --SPEALDF- Site 1946
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---D------ A --SPQALDL- Site 2006
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -G-C------ G --DYLFIEF- Site 2006
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---D------ I --DDMGKDL- Site 2006
Monosiga.brevicollis.CDK1 ---N------ L --DEDGIDL- Site 1946
Saccharomyces.cerevisiae.SKY1 ---K-----D E --AKEISDF- Site 2006
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---G------ A --NPLGLDL- Site 2006
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---R------ L --PPLLLDL- Site 2006
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---I-----R T --PTEAINL- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---P-----D T --SPEALDL- Site 2006
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---K------ L --PEAVISL- Site 2006
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---T------ I --SDTAFDL- Site 2006
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---I------ L --NSVLLDL- Site 1946
Ajellomyces.capsulatus.CDK1 ---G------ L --ERNGLDL- Site 1946
Dictystelium.discoideum.MAPK3..Extracellular.signa ---K------ A --NPDAIDL- Site 2006
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---D------ I --DELGKDL- Site 2006
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---W------ L --SEAGLRL- Site 2006
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac NK-L------ K --ASQARDL- Site 2006
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---R------ A --SPQAADL- Site 2006
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---H------ L --CKYADDL- Site 1943
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---E------ A --THEAVHL- Site 2006
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha NK-L------ K --ASQARDL- Site 2006
Saccharomyces.cerevisiae.CDK1 ---S------ L --DPRGIDL- Site 2006
Lodderomyces.elongisporus.IME2 ---C-----I K --DNSLRQV- Site 2006
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---G------ A --NPQAVDL- Site 2006
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---E------ E --HHQLFSL- Site 2006
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---I------ L --SGVLLDL- Site 1946
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---K------ E --TQETIDL- Site 2006
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---N------ C --CDDGISL- Site 2006
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---E------ E --HEKLFDL- Site 2006
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---K-----A D --RREFIDL- Site 2006
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---N------ I --SYSALGF- Site 2006
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---S----SK T --PPEAIAL- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---L------ L --DDTAFSL- Site 2006
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---E------ M --EESGAQL- Site 2006
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---S------ N --SSEGYDI- Site 2004
Salmo.salar.CDK1 ---P------ L --DDDGREL- Site 2006
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---A------ A --GDDLLEL- Site 2006
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---D------ V --SPQALDL- Site 2006
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- P --EKDLQDV- Site 1872
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---P-----R T --PPEAIAL- Site 2006
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---D------ - --VETFRNL-  
Aspergillus.fumigatus.IME2 ---A----NV G --RTDGASFY Site 1997
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---K------ P --DSKAFHL- Site 2006
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---R------ E --HHHFFDL- Site 2006
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---T------ A --NPQAVDL- Site 2006
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---Q------ T --TDDAVDL- Site 2006
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---K-----A D --RREFIDL- Site 2006
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---K------ S --DSKALDL- Site 2006
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---R------ L --DSEGIEL- Site 2006
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---W------ L --SEAGLRL- Site 2006
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---N------ L --SYQALSL- Site 2006
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S SR-R------ K --ASDARNL- Site 2006
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---N------ A --NPIAIDL- Site 2006
Candida.glabrata.IME2 ---S-----N Q --LTDLLAV- Site 2006
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---N------ A --SNEAIQL- Site 2006
Schizosaccharomyces.pombe.IME2 ---P-----P W --NLAFASM- Site 2006
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---NINPNVQ I --NPLAIDL- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---R------ L --SSKGRDL- Site 2006
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---H-----A D --LKSMVEL- Site 2031
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---R------ L --DTEGINL- Site 2006
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---N------ V --QPVALSF- Site 2006
Branchiostoma.floridae.CDK1 ---S------ L --EPEGTEL- Site 2006
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---E------ D --HHRLFDL- Site 2006
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---R-----S V --PLDALDL- Site 2006
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---R------ N --LPVELEF- Site 2006
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---V-----H T --PAEAIDL- Site 2006
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---N------ A --SSEAVQL- Site 2006
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---L------ E --HVQLFDL- Site 2006
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -V-A------ D --YLKFKDL- Site 2031
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---P------ L --DEDGRSL- Site 2006
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---G------ A --DRQALSL- Site 2006
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---G------ A --NPLAVDL- Site 2006
Lachancea.thermotolerans.SKY1 ---A-----E D --AETISDF- Site 2006
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---G------ I --SREALDF- Site 2006
Dictyostelium.discoideum.CDK1 ---R------ C --EPLALDL- Site 2006
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---N------ A --SPQAVNL- Site 2006
Xenopus.tropicalis.IME2 ---P------ L --DDDGRDL- Site 2006
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---K-----A D --RREYIDL- Site 2006
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. NQHL------ V --SPEALDF- Site 1946
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---P------ L --DEDGRDL- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---N------ L --DRHGRDL- Site 2006
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---R----LG G --VPEAEDL- Site 2006
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---S------ A --SVDALDL- Site 2006
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -V-A------ D --YLKFKDL- Site 2031
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---P-----R T --PPEAIAL- Site 2006
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---I-----R T --PAEAIDL- Site 2006
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---W------ W -NSDAGFRL- Site 2006
Encephalitozoon.cuniculi.CDK1 ---------- G --DPDFVDL- Site 2006
Saccharomyces.kluyveri.IME2 ---N-----P L --LRKLCEV- Site 2006
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---E------ E --HEKLFDL- Site 2006
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---N------ A --DSKALDL- Site 2006
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---R----LG R --VPEAEDL- Site 2006
Cryptococcus.neoformans.IME2 ---D-----S V --PQSLVDC- Site 2006
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---H-----A D --LKSMVEL- Site 2031
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---Q-----E E --AAGFTDF- Site 2031
Candida.lusitaniae.IME2 ---S-----S - --YHELAET-  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---K-----A D --RREYIDL- Site 2006
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---K------ P --DSKAFHL- Site 2006
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---D------ T --SPQAVDL- Site 2006
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---N------ I --SSQALSL- Site 2006
Gallus.gallus.CDK2 ---P------ L --DEEGRKL- Site 2006
Emericella.nidulans.CDK1 ---G------ L --EEDGLDL- Site 2006
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---N------ L --SPQCLSL- Site 2006
Homo.sapiens.CDK1 ---N------ L --DENGLDL- Site 1946
Candida.albicans.CDK1 ---S------ L --DANGIDL- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca NQHL------ V --STEALDF- Site 1946
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---G------ A --DRQALSL- Site 2006
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---N------ A --SSEAIQL- Site 2006
Saccharomyces.castelli.IME2 ---L-----P E --LYDLLDV- Site 2006
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---L------ D --HDQLFDL- Site 2006
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---A------ A --GDDLLEL- Site 2006
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---K----LS Y --VNHAEDL- Site 2006
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---K-----R L --KDEALDL- Site 2006
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS EIWS------ D --HYWCFQV- Site 2031
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---A------ A --GDDLLEL- Site 2006
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -AYV------ R --DPYALDL- Site 2009
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---K-----A D --RREFIDL- Site 2006
Acyrthosiphon.pisum.CDK1 ---E------ L -SDKNQQNV- Site 1946
Candida.tropicalis.CDK1 ---H-----P D --GNALQDV- Site 2006
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---K------ P --DSKAFHL- Site 2006
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---P-----R T --SPEAIDL- Site 2006
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR NQHL------ V --SPEALDF- Site 1946
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---R------ L --DSDGADL- Site 2006
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 NQHL------ V --SPEAIDF- Site 1946
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---R------ L --DSEGIEL- Site 2006
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---K------ A --NPQAVDL- Site 2006
Candida.albicans.SSN3..Serine.threonine.protein.ki ---Q------ N --SEKCLEL- Site 2004
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---H------ A --PPECVDL- Site 2006
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---T-----R T --PADAIQL- Site 2006
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---R------ A --SKKAVEL- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---T------ F --GKEMTSL- Site 2006
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei NQHL------ V --SPEALDF- Site 1946
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---K-----A D --RREFVAL- Site 2006
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---A-----L L --SDQGFDL- Site 2006
Candida.dubliniensis.IME2 ---H-----P D --SLALIEV- Site 2006
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DK-I------ K --TSQARDL- Site 2006
Aspergillus.niger.IME2 ---A----PQ W --PAALSQF- Site 2006
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---G------ A --NPQAVDL- Site 2006
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---K------ L --NGLLADI- Site 1945
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---K----LS Y --VNHAEDL- Site 2006
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein NQHL------ V --SPEALDF- Site 1946
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -V-E------ D --YSKFKDL- Site 2006
Schizosaccharomyces.japonicus.IME2 ---P-----P W --NNTFASM- Site 2006
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. SR-L------ T --GAQARDL- Site 2006
Gallus.gallus.CDK1 ---N------ L --DEDGLDL- Site 1946
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---K------ L --NATGRDL- Site 2006
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---K------ A --DANAIDL- Site 2006
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---G------ M --SAAALDF- Site 2006
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---V-----H T --PAEAIDL- Site 2006
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---N------ A --SPLAVNL- Site 2006
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ETKL------ A --VPEVVDL- Site 2006
Kluyveromyces.waltii.IME2 ---N-----P H --LQELCEV- Site 2006
Debaryomyces.hansenii.SKY1 ---L-----A D --AVEIADF- Site 2006
Saccharomyces.cerevisiae.IME2 ---S-----S Q --LSDLSEV- Site 2006
Schizosaccharomyces.japonicus.b.IME2 ---D-----E W --HGAHSKM- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---G------ I --DEQGKDL- Site 2006
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein NRHL------ V --SPEVLDL- Site 1946
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---G------ I --SREALDF- Site 2006
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---D------ I --DELGKDL- Site 2006
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---A------ E --DPDTLDL- Site 2006
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---Y------ A --NPLAVNI- Site 2006
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---K------ L --NGLLADI- Site 2006
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act NK-L------ K --ASQARDL- Site 2006
Candida.albicans.IME2 ---H-----P D --SLALIEV- Site 2006
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---E------ I --DAMGADL- Site 2006
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---H------ I --TDNAFDL- Site 2006
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---G------ A --NPLAVDL- Site 2006
Kluyveromyces.lactis.IME2 ---N-----P Q --LEDLYDV- Site 2006
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---G------ A --DRQALSL- Site 2006
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. NK-L------ K --ASQARDL- Site 2006
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---G------ A --NPLAIDL- Site 2006
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---G------ A --NPLAIDL- Site 2006
Amphimedon.queenslandica.CDK1 ---S------ L --DTLGINL- Site 1946
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---D------ V --HPVALNF- Site 2006
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---N------ L --DRDGRDL- Site 1946
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -E-K------ T --SEMGLSL- Site 2006
Neurospora.crassa.IME2 ---T----PQ W --PASLAHF- Site 2006
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---R------ L --NSKGRDL- Site 2006
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---S------ G --DEDFDNF- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---E------ M --EESGAQL- Site 2006
Hydra.magnipapillata.CDK1 ---M------ L --DENGIDL- Site 2006
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---W------ L --SEAGLRL- Site 2006
Ashbya.gossypii.IME2 ---N-----P Q --LESLCDV- Site 2006
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- S --EKDLRDV- Site 1872
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -G-C------ D --DYLFIEF- Site 2006
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---K------ E --DDQTVEF- Site 2006
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---A-----S V --PPDALDL- Site 2006
Schizosaccharomyces.pombe.b.IME2 ---Q-----N C --PEGHAKM- Site 2006
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---N------ A --DSKALDL- Site 2006
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---K-----A D --RREFVNL- Site 2006
Schizosaccharomyces.pombe.CDK1 ---N------ G --EEDAIEL- Site 2006
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---E------ E --HHQLFDL- Site 2006
Saccoglossus.kowalevskii.CDK1 ---S------ L --DMDGLDL- Site 2006
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas KPDYSYLRQL F RNLFHRQGF- Site 1946
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac NK-L------ K --ASQARDL- Site 2006
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---S------ L --GPEGKDL- Site 2006
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---G------ - --TDVYYLL-  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---N------ L --EPEGRDL- Site 2006
Yarrowia.lipolytica.IME2 ---N-----P E --HASLTDV- Site 2006
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---G------ R --DKHALSL- Site 2006
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---P------ L --DEDGRDL- Site 2006
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K AVWD------ D --HFWCFDL- Site 2031
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---K------ A --DADAIDL- Site 2006
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---R-----S V --PLDALDL- Site 2006
Species Residue at Site 3099
in 'msaprobs'
muscle

The residue for every species at site 3099 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -V-E------ D --YSKFKDL- Site 2010
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---Q------ A --THEAVHL- Site 2006
Scheffersomyces.stipitis.SKY1 ---M-----Q D --AMDVADF- Site 2006
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---K------ L --NATGRDL- Site 2006

Generated by PhyloBot at 15:44, October 23rd 2019
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