cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3089 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3089 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3089 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3089 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - --P-----PW  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - --I-----QE  
Danio.rerio.CDK1 ---------- - --P------L  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - --H------V  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - --K------L  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - --T------L  
Candida.guilliermondii.IME2 ---------- - --H-----S-  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ AGERTSGAAG P SMDKIEKATG Site 2262
Chlamydomonas.reinhardtii.LF4 ---------- - --H------V  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - --H-----NC  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - -----IGEKK  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - --K------P  
Schizosaccharomyces.octosporus.b.IME2 ---------- - --A-----NC  
Candida.albicans.MAPK3..Extracellular.signal.regul NNTSTSNTGG R T-N------I Site 2003
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. --------AD N RHL------V Site 1942
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 EFAIYLNYCR S LKFEEKPDYD Site 1905
Suberites.domuncula.JNK..Stress.activated.protein. DDVFPNDTPE D K-A------K Site 2003
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - --L------E  
Aedes.aegypti.CDK1 ---------- - --N------L  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - --A------E  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - --E------E  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - --T------Y  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - --K-----AD  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - --S------I  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ---------I  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --------SE N RHL------V Site 1942
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - --N------A  
Strongylocentrotus.purpuratus.CDK1 ---------- - --M------L  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca FHYCHSLTFD Q RPDYSFLRHV Site 1914
Drosophila.melanogaster.CDK1 ---------- - --N------L  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 GYPKEFQQYL N YSRKLKFEEK Site 1901
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - --E-----AE  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - --R------L  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - --K------L  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET DCLFPADSEH N K-L------K Site 2003
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - --K------L  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U DCLFPADSEH N K-L------K Site 2003
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - --R------A  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - --Q------A  
Bombus.terrestris.CDK1 ---------- - --S------F  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - --Q-----EE  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - --K------L  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. DVLFPADSEH N K-L------K Site 2003
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- - --F------I  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - --N------L  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - --Q-----PL  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- D HSL-----KD Site 2001
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - --K-----TD  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --------AD N QHL------V Site 1942
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - --Q------A  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - --N------I  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- - --K-----AD  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - --A-----LL  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - --I------I  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - --E------D  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - --A-----LL  
Naegleria.gruberi.LF4 ---------- - --N------V  
Saccharomyces.bayanus.IME2 ---------- - --S-----SQ  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --------SE N RHL------V Site 1942
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - --N------V  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - --A------A  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - L-V------D  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - P-A------D  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - G-C------D  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - --I------L  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - --P-----DT  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ---------P  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - --T------Y  
Aspergillus.nidulans.IME2 ---------- - --A----PQW  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi HPKDCTSNSE G WDS------V Site 1945
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - --D------K  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - --N------A  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - --P------L  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. DSLFPADSEH N K-L------K Site 2003
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - --K-----RM  
Penicillium.marneffei.IME2 ---------- - --G----PHW  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - --G------A  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - --E------V  
Drosophila.melanogaster.MAK ---------- - --R------C  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - F-I------I  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - R-K------K  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- - --F------I  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - --D------E  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - --W------L  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin DSLFPADSEH N K-L------K Site 2003
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a DWIFPSESER D K-I------K Site 2003
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - --V------E  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis CFDEYNTNLE G WNE------V Site 2002
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - --D-----A-  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - --N------R  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - --S-----RT  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. DWIFPSESDR D K-L------K Site 2003
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --------SE N QHL------V Site 1942
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - --S------A  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - --D------V  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - --R------L  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --------SE N QHL------V Site 1942
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - --G------T  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - --N------A  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - P-A------D  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --------AE N QHL------V Site 1942
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - --S-----KT  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - --A----KDV  
Candida.orthopsilosis.IME2 ---------- - --D-----A-  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - --A------A  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str DNMFPPGADN A R-L------T Site 2003
Debaryomyces.hansenii.IME2 ---------- - --D-----S-  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - --K-----RM  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - --G------R  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - --C------L  
Caenorhabditis.briggsae.CDK1 ---------- - --L------M  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO --------SD N QHL------V Site 1942
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - --D------A  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - G-C------G  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - --D------I  
Monosiga.brevicollis.CDK1 ---------- - --N------L  
Saccharomyces.cerevisiae.SKY1 ---------- - --K-----DE  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - --G------A  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - --R------L  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - --I-----RT  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - --P-----DT  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - --K------L  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - --T------I  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - --I------L  
Ajellomyces.capsulatus.CDK1 ---------- - --G------L  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - --K------A  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - --D------I  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - --W------L  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac DVLFPADSEH N K-L------K Site 2003
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - --R------A  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - --H------L  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - --E------A  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha DSLFPADSEH N K-L------K Site 2003
Saccharomyces.cerevisiae.CDK1 ---------- - --S------L  
Lodderomyces.elongisporus.IME2 ---------- - --C-----IK  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - --G------A  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - --E------E  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - --I------L  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - --K------E  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - --N------C  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - --E------E  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - --K-----AD  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - --N------I  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - --S----SKT  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - --L------L  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - --E------M  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - --S------N  
Salmo.salar.CDK1 ---------- - --P------L  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - --A------A  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - --D------V  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ---------P  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - --P-----RT  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - --D-------  
Aspergillus.fumigatus.IME2 ---------- - --A----NVG  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - --K------P  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - --R------E  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - --T------A  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - --Q------T  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - --K-----AD  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - --K------S  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - --R------L  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - --W------L  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - --N------L  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S GLFPNDNNQN S R-R------K Site 2003
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - --N------A  
Candida.glabrata.IME2 ---------- - --S-----NQ  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - --N------A  
Schizosaccharomyces.pombe.IME2 ---------- - --P-----PW  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - --NINPNVQI  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - --R------L  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - --H-----AD  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - --R------L  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - --N------V  
Branchiostoma.floridae.CDK1 ---------- - --S------L  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - --E------D  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - --R-----SV  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - --R------N  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - --V-----HT  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - --N------A  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - --L------E  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - V-A------D  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - --P------L  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - --G------A  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - --G------A  
Lachancea.thermotolerans.SKY1 ---------- - --A-----ED  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - --G------I  
Dictyostelium.discoideum.CDK1 ---------- - --R------C  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - --N------A  
Xenopus.tropicalis.IME2 ---------- - --P------L  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- - --K-----AD  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --------SE N QHL------V Site 1942
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - --P------L  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - --N------L  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --R----LGG  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - --S------A  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - V-A------D  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - --P-----RT  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - --I-----RT  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - --W------W  
Encephalitozoon.cuniculi.CDK1 ---------- - ---------G  
Saccharomyces.kluyveri.IME2 ---------- - --N-----PL  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - --E------E  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - --N------A  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - --R----LGR  
Cryptococcus.neoformans.IME2 ---------- - --D-----SV  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - --H-----AD  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - --Q-----EE  
Candida.lusitaniae.IME2 ---------- - --S-----S-  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - --K-----AD  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - --K------P  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - --D------T  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - --N------I  
Gallus.gallus.CDK2 ---------- - --P------L  
Emericella.nidulans.CDK1 ---------- - --G------L  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - --N------L  
Homo.sapiens.CDK1 ---------- - --N------L  
Candida.albicans.CDK1 ---------- - --S------L  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca --------SE N QHL------V Site 1942
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - --G------A  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - --N------A  
Saccharomyces.castelli.IME2 ---------- - --L-----PE  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - --L------D  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - --A------A  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --K----LSY  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - --K-----RL  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS DAYELKKYQE E IWS------D Site 2027
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - --A------A  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - AYV------R  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - --K-----AD  
Acyrthosiphon.pisum.CDK1 ---------- - --E------L  
Candida.tropicalis.CDK1 ---------- - --H-----PD  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - --K------P  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - --P-----RT  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --------SE N QHL------V Site 1942
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - --R------L  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --------AD N QHL------V Site 1942
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - --R------L  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - --K------A  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - --Q------N  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - --H------A  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - --T-----RT  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - --R------A  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - --T------F  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --------SE N QHL------V Site 1942
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - --K-----AD  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - --A-----LL  
Candida.dubliniensis.IME2 ---------- - --H-----PD  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DWIFPSESER D K-I------K Site 2003
Aspergillus.niger.IME2 ---------- - --A----PQW  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - --G------A  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - --K------L  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --K----LSY  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --------SE N QHL------V Site 1942
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - V-E------D  
Schizosaccharomyces.japonicus.IME2 ---------- - --P-----PW  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. DNMFPMTADS S R-L------T Site 2003
Gallus.gallus.CDK1 ---------- - --N------L  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - --K------L  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - --K------A  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - --G------M  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - --V-----HT  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - --N------A  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --------TS E TKL------A Site 2002
Kluyveromyces.waltii.IME2 ---------- - --N-----PH  
Debaryomyces.hansenii.SKY1 ---------- - --L-----AD  
Saccharomyces.cerevisiae.IME2 ---------- - --S-----SQ  
Schizosaccharomyces.japonicus.b.IME2 ---------- - --D-----EW  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - --G------I  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --------SE N RHL------V Site 1942
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - --G------I  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - --D------I  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - --A------E  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - --Y------A  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - --K------L  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act DVLFPADSDH N K-L------K Site 2003
Candida.albicans.IME2 ---------- - --H-----PD  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - --E------I  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - --H------I  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - --G------A  
Kluyveromyces.lactis.IME2 ---------- - --N-----PQ  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - --G------A  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. DSLFPADSEH N K-L------K Site 2003
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - --G------A  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - --G------A  
Amphimedon.queenslandica.CDK1 ---------- - --S------L  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - --D------V  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - --N------L  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - E-K------T  
Neurospora.crassa.IME2 ---------- - --T----PQW  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - --R------L  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - --S------G  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - --E------M  
Hydra.magnipapillata.CDK1 ---------- - --M------L  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - --W------L  
Ashbya.gossypii.IME2 ---------- - --N-----PQ  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ---------S  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - G-C------D  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - --K------E  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - --A-----SV  
Schizosaccharomyces.pombe.b.IME2 ---------- - --Q-----NC  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - --N------A  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - --K-----AD  
Schizosaccharomyces.pombe.CDK1 ---------- - --N------G  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - --E------E  
Saccoglossus.kowalevskii.CDK1 ---------- - --S------L  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas NFCRSLRFDD K PDYSYLRQLF Site 1932
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac DVLFPADSEH N K-L------K Site 2003
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - --S------L  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - --G-------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - --N------L  
Yarrowia.lipolytica.IME2 ---------- - --N-----PE  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - --G------R  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - --P------L  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K IDDKIRSYKQ A VWD------D Site 2027
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - --K------A  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - --R-----SV  
Species Residue at Site 3089
in 'msaprobs'
muscle

The residue for every species at site 3089 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - V-E------D  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - --Q------A  
Scheffersomyces.stipitis.SKY1 ---------- - --M-----QD  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - --K------L  

Generated by PhyloBot at 02:23, October 16th 2019
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