cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3084 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3084 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3084 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3084 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -S-------- - -------P--  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -S-------- - -------I--  
Danio.rerio.CDK1 -P-------- - -------P--  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -P-------- - -------H--  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -P-------- - -------K--  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -P-------- - -------T--  
Candida.guilliermondii.IME2 -P-------- - -------H--  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ NPRMRAGERT S GAAGPSMDKI Site 2257
Chlamydomonas.reinhardtii.LF4 -P-------- - -------H--  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -P-------- - -------H--  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho KV-------- - -------K--  
Schizosaccharomyces.octosporus.b.IME2 -P-------- - -------A--  
Candida.albicans.MAPK3..Extracellular.signal.regul -ANTNNNTST S NTGGRT-N-- Site 1998
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -N-------- - --ADNRHL--  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 KGYPAEFAIY L NYCRSLKFEE Site 1894
Suberites.domuncula.JNK..Stress.activated.protein. -P---DDVFP N DTPEDK-A-- Site 1998
Homo.sapiens.CLK3..Dual.specificity.protein.kinase DS-------- - -------L--  
Aedes.aegypti.CDK1 -K-------- - -------N--  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci QD-------- - -------A--  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase EA-------- - -------E--  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -K-------- - -------T--  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -E-------- - -------K--  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -P-------- - -------S--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -T-------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -H-------- - --SENRHL--  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -P-------- - -------N--  
Strongylocentrotus.purpuratus.CDK1 -P-------- - -------M--  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca EFASYFHYCH S LTFDQRPDYS Site 1905
Drosophila.melanogaster.CDK1 -K-------- - -------N--  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 EDLTAGYPKE F QQYLNYSRKL Site 1879
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -P-------- - -------E--  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -P-------- - -------R--  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -P-------- - -------K--  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -P---DCLFP A DSEHNK-L-- Site 1998
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -P-------- - -------K--  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -P---DCLFP A DSEHNK-L-- Site 1998
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -P-------- - -------R--  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -S-------- - -------Q--  
Bombus.terrestris.CDK1 -P-------- - -------S--  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -S-------- - -------Q--  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -P-------- - -------K--  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -P---DVLFP A DSEHNK-L-- Site 1998
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -S-------- - -------F--  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -A-------- - -------N--  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -K-------- - -------Q--  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -C-------- - ----DHSL--  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO AE-------- - -------K--  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -N-------- - --ADNQHL--  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -S-------- - -------Q--  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -P-------- - -------N--  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -E-------- - -------K--  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -G-------- - -------A--  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d LG-------- - -------I--  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci EA-------- - -------E--  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -G-------- - -------A--  
Naegleria.gruberi.LF4 -P-------- - -------N--  
Saccharomyces.bayanus.IME2 -S-------- - -------S--  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -H-------- - --SENRHL--  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -P-------- - -------N--  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -T-------- - -------A--  
Dictyostelium.discoideum.DYRK1..Probable.serine.th HA-------- - -----L-V--  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos HS-------- - -----P-A--  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -K-------- - -----G-C--  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d LG-------- - -------I--  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -P-------- - -------P--  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -K-------- - -------T--  
Aspergillus.nidulans.IME2 -P-------- - -------A--  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi DGYWSHPKDC T SNSEGWDS-- Site 1940
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se PD-------- - -------D--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -P-------- - -------N--  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -P-------- - -------P--  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -P---DSLFP A DSEHNK-L-- Site 1998
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -H-------- - -------K--  
Penicillium.marneffei.IME2 -Q-------- - -------G--  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -I-------- - -------G--  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -P-------- - -------E--  
Drosophila.melanogaster.MAK -S-------- - -------R--  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH EE-------- - -----F-I--  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr DQ-------- - -----R-K--  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -S-------- - -------F--  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GI-------- - -------D--  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -P-------- - -------W--  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -P---DSLFP A DSEHNK-L-- Site 1998
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -P---DWIFP S ESERDK-I-- Site 1998
Homo.sapiens.CLK1..Dual.specificity.protein.kinase QD-------- - -------V--  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis NSCEHCFDEY N TNLEGWNE-- Site 1997
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 -P-------- - -------D--  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -K-------- - -------N--  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -K-------- - -------S--  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -P---DWIFP S ESDRDK-L-- Site 1998
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -H-------- - --SENQHL--  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U YC-------- - -------S--  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -P-------- - -------D--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -P-------- - -------R--  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -H-------- - --SENQHL--  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -G-------- - -------G--  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -P-------- - -------N--  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos HS-------- - -----P-A--  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -H-------- - --AENQHL--  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -R-------- - -------S--  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -K-------- - -------A--  
Candida.orthopsilosis.IME2 -P-------- - -------D--  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -S-------- - -------A--  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ----ADNMFP P GADNAR-L-- Site 1998
Debaryomyces.hansenii.IME2 -P-------- - -------D--  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -S-------- - -------K--  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -G-------- - -------G--  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -S-------- - -------C--  
Caenorhabditis.briggsae.CDK1 NY-------- - -------L--  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -H-------- - --SDNQHL--  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -P-------- - -------D--  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -K-------- - -----G-C--  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -P-------- - -------D--  
Monosiga.brevicollis.CDK1 -K-------- - -------N--  
Saccharomyces.cerevisiae.SKY1 -S-------- - -------K--  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -P-------- - -------G--  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -P-------- - -------R--  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -R-------- - -------I--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -P-------- - -------P--  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -P-------- - -------K--  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -P-------- - -------T--  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d LG-------- - -------I--  
Ajellomyces.capsulatus.CDK1 -P-------- - -------G--  
Dictystelium.discoideum.MAPK3..Extracellular.signa -P-------- - -------K--  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -T-------- - -------D--  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -P-------- - -------W--  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -P---DVLFP A DSEHNK-L-- Site 1998
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -P-------- - -------R--  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -P-------- - -------H--  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -G-------- - -------E--  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -P---DSLFP A DSEHNK-L-- Site 1998
Saccharomyces.cerevisiae.CDK1 -P-------- - -------S--  
Lodderomyces.elongisporus.IME2 -P-------- - -------C--  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -I-------- - -------G--  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ET-------- - -------E--  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar LG-------- - -------I--  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -K-------- - -------K--  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -K-------- - -------N--  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase HD-------- - -------E--  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -E-------- - -------K--  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -P-------- - -------N--  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -K-------- - -------S--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 KH-------- - -------L--  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -P-------- - -------E--  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -R-------- - -------S--  
Salmo.salar.CDK1 -P-------- - -------P--  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -I-------- - -------A--  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -P-------- - -------D--  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -R-------- - -------P--  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - -------D--  
Aspergillus.fumigatus.IME2 -I-------- - -------A--  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan KV-------- - -------K--  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha HG-------- - -------R--  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -P-------- - -------T--  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -Q-------- - -------Q--  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -E-------- - -------K--  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -P-------- - -------K--  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -P-------- - -------R--  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -P-------- - -------W--  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -P-------- - -------N--  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -P--DGLFPN D NNQNSR-R-- Site 1998
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -P-------- - -------N--  
Candida.glabrata.IME2 -C-------- - -------S--  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -P-------- - -------N--  
Schizosaccharomyces.pombe.IME2 -S-------- - -------P--  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -G-------- - -------NIN  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -P-------- - -------R--  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -E-------- - -------H--  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -P-------- - -------R--  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -S-------- - -------N--  
Branchiostoma.floridae.CDK1 -A-------- - -------S--  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara EA-------- - -------E--  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -S-------- - -------R--  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD IL-------- - -------R--  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -R-------- - -------V--  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -P-------- - -------N--  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci DS-------- - -------L--  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos HT-------- - -----V-A--  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -P-------- - -------P--  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -P-------- - -------G--  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -I-------- - -------G--  
Lachancea.thermotolerans.SKY1 -A-------- - -------A--  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -P-------- - -------G--  
Dictyostelium.discoideum.CDK1 -P-------- - -------R--  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -T-------- - -------N--  
Xenopus.tropicalis.IME2 -P-------- - -------P--  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -E-------- - -------K--  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -H-------- - --SENQHL--  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -P-------- - -------P--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -P-------- - -------N--  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -D-------- - -------R--  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -P-------- - -------S--  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos HT-------- - -----V-A--  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -R-------- - -------P--  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -R-------- - -------I--  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -P-------- - -------W--  
Encephalitozoon.cuniculi.CDK1 -R-------- - ----------  
Saccharomyces.kluyveri.IME2 -S-------- - -------N--  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci HD-------- - -------E--  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -P-------- - -------N--  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -N-------- - -------R--  
Cryptococcus.neoformans.IME2 -N-------- - -------D--  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -E-------- - -------H--  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -P-------- - -------Q--  
Candida.lusitaniae.IME2 -P-------- - -------S--  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -E-------- - -------K--  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A KI-------- - -------K--  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -P-------- - -------D--  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -V-------- - -------N--  
Gallus.gallus.CDK2 -P-------- - -------P--  
Emericella.nidulans.CDK1 -P-------- - -------G--  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -T-------- - -------N--  
Homo.sapiens.CDK1 -K-------- - -------N--  
Candida.albicans.CDK1 -P-------- - -------S--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -H-------- - --SENQHL--  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -P-------- - -------G--  
Mus.musculus.ICK..Serine.threonine.protein.kinase. -P-------- - -------N--  
Saccharomyces.castelli.IME2 -P-------- - -------L--  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec QS-------- - -------L--  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -I-------- - -------A--  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -N-------- - -------K--  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -H-------- - -------K--  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS NMDAVDAYEL K KYQEEIWS-- Site 2022
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -S-------- - -------A--  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -K-------- - -----AYV--  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -E-------- - -------K--  
Acyrthosiphon.pisum.CDK1 -P-------- - -------E--  
Candida.tropicalis.CDK1 -Q-------- - -------H--  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin KI-------- - -------K--  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -R-------- - -------P--  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -H-------- - --SENQHL--  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -P-------- - -------R--  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -N-------- - --ADNQHL--  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -P-------- - -------R--  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -P-------- - -------K--  
Candida.albicans.SSN3..Serine.threonine.protein.ki NN-------- - -------Q--  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -P-------- - -------H--  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -R-------- - -------T--  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -P-------- - -------R--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -F-------- - -------T--  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -H-------- - --SENQHL--  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -E-------- - -------K--  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -G-------- - -------A--  
Candida.dubliniensis.IME2 -Q-------- - -------H--  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -P---DWIFP S ESERDK-I-- Site 1998
Aspergillus.niger.IME2 -Q-------- - -------A--  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -L-------- - -------G--  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -P-------- - -------K--  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -N-------- - -------K--  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -H-------- - --SENQHL--  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty HS-------- - -----V-E--  
Schizosaccharomyces.japonicus.IME2 -S-------- - -------P--  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -S---DNMFP M TADSSR-L-- Site 1998
Gallus.gallus.CDK1 -Q-------- - -------N--  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -P-------- - -------K--  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -R-------- - -------K--  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -T-------- - -------G--  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -R-------- - -------V--  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -T-------- - -------N--  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -I-------- - --TSETKL--  
Kluyveromyces.waltii.IME2 -A-------- - -------N--  
Debaryomyces.hansenii.SKY1 -S-------- - -------L--  
Saccharomyces.cerevisiae.IME2 -S-------- - -------S--  
Schizosaccharomyces.japonicus.b.IME2 -P-------- - -------D--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -P-------- - -------G--  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -H-------- - --SENRHL--  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -P-------- - -------G--  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -T-------- - -------D--  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -K-------- - -------A--  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -R-------- - -------Y--  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -P-------- - -------K--  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -P---DVLFP A DSDHNK-L-- Site 1998
Candida.albicans.IME2 -Q-------- - -------H--  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -P-------- - -------E--  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -P-------- - -------H--  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -I-------- - -------G--  
Kluyveromyces.lactis.IME2 -P-------- - -------N--  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -P-------- - -------G--  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -P---DSLFP A DSEHNK-L-- Site 1998
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -R-------- - -------G--  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -H-------- - -------G--  
Amphimedon.queenslandica.CDK1 -K-------- - -------S--  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -S-------- - -------D--  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -P-------- - -------N--  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -Q-------- - -----E-K--  
Neurospora.crassa.IME2 -Q-------- - -------T--  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -P-------- - -------R--  
Dictyostelium.discoideum.DYRK2..Probable.serine.th -R-------- - -------S--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -P-------- - -------E--  
Hydra.magnipapillata.CDK1 -P-------- - -------M--  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -P-------- - -------W--  
Ashbya.gossypii.IME2 -C-------- - -------N--  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -K-------- - -----G-C--  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -K-------- - -------K--  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -P-------- - -------A--  
Schizosaccharomyces.pombe.b.IME2 -P-------- - -------Q--  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -P-------- - -------N--  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -E-------- - -------K--  
Schizosaccharomyces.pombe.CDK1 -P-------- - -------N--  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch EA-------- - -------E--  
Saccoglossus.kowalevskii.CDK1 -G-------- - -------S--  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas FATYLNFCRS L RFDDKPDYSY Site 1906
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -P---DVLFP A DSEHNK-L-- Site 1998
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -P-------- - -------S--  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - -------G--  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -P-------- - -------N--  
Yarrowia.lipolytica.IME2 -C-------- - -------N--  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -G-------- - -------G--  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -P-------- - -------P--  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K DDEEDIDDKI R SYKQAVWD-- Site 2022
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -K-------- - -------K--  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -S-------- - -------R--  
Species Residue at Site 3084
in 'msaprobs'
muscle

The residue for every species at site 3084 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro HS-------- - -----V-E--  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -S-------- - -------Q--  
Scheffersomyces.stipitis.SKY1 -P-------- - -------M--  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -P-------- - -------K--  

Generated by PhyloBot at 09:06, February 29th 2020
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