cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 3079 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3079 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3079 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3079 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ------S--- - ----------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ------S--- - ----------  
Danio.rerio.CDK1 ------P--- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ------P--- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ------P--- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ------P--- - ----------  
Candida.guilliermondii.IME2 ------P--- - ----------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ PQIGSNPRMR A GERTSGAAGP Site 2243
Chlamydomonas.reinhardtii.LF4 ------P--- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ------P--- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -----KV--- - ----------  
Schizosaccharomyces.octosporus.b.IME2 ------P--- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ------ANTN N NTSTSNTGGR Site 1993
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ------N--- - -------ADN  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 IEVLCKGYPA E FAIYLNYCRS Site 1878
Suberites.domuncula.JNK..Stress.activated.protein. ------P--- D DVFPNDTPED Site 1993
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---LQDS--- - ----------  
Aedes.aegypti.CDK1 ------K--- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---LSQD--- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---TSEA--- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ------K--- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ------E--- - ----------  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ------P--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ------T--- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ------H--- - -------SEN  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ------P--- - ----------  
Strongylocentrotus.purpuratus.CDK1 ------P--- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca KSHPVEFASY F HYCHSLTFDQ Site 1894
Drosophila.melanogaster.CDK1 ------K--- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 AVTSIEDLTA G YPKEFQQYLN Site 1870
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ------P--- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ------P--- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ------P--- - ----------  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ------P--- D CLFPADSEHN Site 1993
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ------P--- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ------P--- D CLFPADSEHN Site 1993
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ------P--- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ------S--- - ----------  
Bombus.terrestris.CDK1 ------P--- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ------S--- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ------P--- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ------P--- D VLFPADSEHN Site 1993
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ------S--- - ----------  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ------A--- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ------K--- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ------C--- - ---------D  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -----AE--- - ----------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ------N--- - -------ADN  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ------S--- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ------P--- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ------E--- - ----------  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ------G--- - ----------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -----LG--- - ----------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---TSEA--- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ------G--- - ----------  
Naegleria.gruberi.LF4 ------P--- - ----------  
Saccharomyces.bayanus.IME2 ------S--- - ----------  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ------H--- - -------SEN  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ------P--- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ------T--- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---PGHA--- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---PGHS--- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ------K--- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -----LG--- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ------P--- - ----------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ------K--- - ----------  
Aspergillus.nidulans.IME2 ------P--- - ----------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi YKRDNDGYWS H PKDCTSNSEG Site 1935
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ----SPD--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ------P--- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ------P--- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ------P--- D SLFPADSEHN Site 1993
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ------H--- - ----------  
Penicillium.marneffei.IME2 ------Q--- - ----------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ------I--- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ------P--- - ----------  
Drosophila.melanogaster.MAK ------S--- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---TDEE--- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---PEDQ--- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ------S--- - ----------  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -----GI--- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ------P--- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ------P--- D SLFPADSEHN Site 1993
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ------P--- D WIFPSESERD Site 1993
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---LSQD--- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis KKGDSNSCEH C FDEYNTNLEG Site 1945
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ------P--- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ------K--- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ------K--- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ------P--- D WIFPSESDRD Site 1993
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ------H--- - -------SEN  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---HFYC--- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ------P--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ------P--- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ------H--- - -------SEN  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ------G--- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ------P--- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---PGHS--- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ------H--- - -------AEN  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ------R--- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ------K--- - ----------  
Candida.orthopsilosis.IME2 ------P--- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ------S--- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------A D NMFPPGADNA Site 1993
Debaryomyces.hansenii.IME2 ------P--- - ----------  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ------S--- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ------G--- - ----------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ------S--- - ----------  
Caenorhabditis.briggsae.CDK1 DKKSGNY--- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ------H--- - -------SDN  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ------P--- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ------K--- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ------P--- - ----------  
Monosiga.brevicollis.CDK1 ------K--- - ----------  
Saccharomyces.cerevisiae.SKY1 ------S--- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ------P--- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ------P--- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ------R--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ------P--- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ------P--- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ------P--- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -----LG--- - ----------  
Ajellomyces.capsulatus.CDK1 ------P--- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ------P--- - ----------  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ------T--- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ------P--- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ------P--- D VLFPADSEHN Site 1993
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ------P--- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ------P--- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ------G--- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ------P--- D SLFPADSEHN Site 1993
Saccharomyces.cerevisiae.CDK1 ------P--- - ----------  
Lodderomyces.elongisporus.IME2 ------P--- - ----------  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ------I--- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---MMET--- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -----LG--- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ------K--- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ------K--- - ----------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---LCHD--- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ------E--- - ----------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ------P--- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ------K--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 DKKTGKH--- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ------P--- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ------R--- - ----------  
Salmo.salar.CDK1 ------P--- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ------I--- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ------P--- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ------R--- - ----------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ------I--- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -----KV--- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---LSHG--- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ------P--- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ------Q--- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ------E--- - ----------  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ------P--- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ------P--- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ------P--- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ------P--- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ------P--D G LFPNDNNQNS Site 1993
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ------P--- - ----------  
Candida.glabrata.IME2 ------C--- - ----------  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ------P--- - ----------  
Schizosaccharomyces.pombe.IME2 ------S--- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ------G--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ------P--- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ------E--- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ------P--- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ------S--- - ----------  
Branchiostoma.floridae.CDK1 ------A--- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---TSEA--- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ------S--- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ----RIL--- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ------R--- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ------P--- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---LQDS--- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---SGHT--- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ------P--- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ------P--- - ----------  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ------I--- - ----------  
Lachancea.thermotolerans.SKY1 ------A--- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ------P--- - ----------  
Dictyostelium.discoideum.CDK1 ------P--- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ------T--- - ----------  
Xenopus.tropicalis.IME2 ------P--- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ------E--- - ----------  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ------H--- - -------SEN  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ------P--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ------P--- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ------D--- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ------P--- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---SGHT--- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ------R--- - ----------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ------R--- - ----------  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ------P--- - ----------  
Encephalitozoon.cuniculi.CDK1 ------R--- - ----------  
Saccharomyces.kluyveri.IME2 ------S--- - ----------  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---LCHD--- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ------P--- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ------N--- - ----------  
Cryptococcus.neoformans.IME2 ------N--- - ----------  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ------E--- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ------P--- - ----------  
Candida.lusitaniae.IME2 ------P--- - ----------  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ------E--- - ----------  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -----KI--- - ----------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ------P--- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ------V--- - ----------  
Gallus.gallus.CDK2 ------P--- - ----------  
Emericella.nidulans.CDK1 ------P--- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ------T--- - ----------  
Homo.sapiens.CDK1 ------K--- - ----------  
Candida.albicans.CDK1 ------P--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ------H--- - -------SEN  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ------P--- - ----------  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ------P--- - ----------  
Saccharomyces.castelli.IME2 ------P--- - ----------  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---MVQS--- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ------I--- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ------N--- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ------H--- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS PDPKTNMDAV D AYELKKYQEE Site 2017
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ------S--- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ------K--- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ------E--- - ----------  
Acyrthosiphon.pisum.CDK1 ------P--- - ----------  
Candida.tropicalis.CDK1 ------Q--- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -----KI--- - ----------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ------R--- - ----------  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ------H--- - -------SEN  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ------P--- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ------N--- - -------ADN  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ------P--- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ------P--- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki --NGGNN--- - ----------  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ------P--- - ----------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ------R--- - ----------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ------P--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ------F--- - ----------  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ------H--- - -------SEN  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ------E--- - ----------  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ------G--- - ----------  
Candida.dubliniensis.IME2 ------Q--- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ------P--- D WIFPSESERD Site 1993
Aspergillus.niger.IME2 ------Q--- - ----------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ------L--- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ------P--- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ------N--- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ------H--- - -------SEN  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---PGHS--- - ----------  
Schizosaccharomyces.japonicus.IME2 ------S--- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ------S--- D NMFPMTADSS Site 1993
Gallus.gallus.CDK1 ------Q--- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ------P--- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ------R--- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ------T--- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ------R--- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ------T--- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ------I--- - -------TSE  
Kluyveromyces.waltii.IME2 ------A--- - ----------  
Debaryomyces.hansenii.SKY1 ------S--- - ----------  
Saccharomyces.cerevisiae.IME2 ------S--- - ----------  
Schizosaccharomyces.japonicus.b.IME2 ------P--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ------P--- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ------H--- - -------SEN  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ------P--- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ------T--- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ------K--- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ------R--- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ------P--- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ------P--- D VLFPADSDHN Site 1993
Candida.albicans.IME2 ------Q--- - ----------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ------P--- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ------P--- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ------I--- - ----------  
Kluyveromyces.lactis.IME2 ------P--- - ----------  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ------P--- - ----------  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ------P--- D SLFPADSEHN Site 1993
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ------R--- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ------H--- - ----------  
Amphimedon.queenslandica.CDK1 ------K--- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ------S--- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ------P--- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ------Q--- - ----------  
Neurospora.crassa.IME2 ------Q--- - ----------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ------P--- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ------R--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ------P--- - ----------  
Hydra.magnipapillata.CDK1 ------P--- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ------P--- - ----------  
Ashbya.gossypii.IME2 ------C--- - ----------  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ------K--- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ------K--- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ------P--- - ----------  
Schizosaccharomyces.pombe.b.IME2 ------P--- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ------P--- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ------E--- - ----------  
Schizosaccharomyces.pombe.CDK1 ------P--- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---LSEA--- - ----------  
Saccoglossus.kowalevskii.CDK1 ------G--- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas GYPSEFATYL N FCRSLRFDDK Site 1901
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ------P--- D VLFPADSEHN Site 1993
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ------P--- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ------P--- - ----------  
Yarrowia.lipolytica.IME2 ------C--- - ----------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ------G--- - ----------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ------P--- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K PSLGPDDEED I DDKIRSYKQA Site 2017
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ------K--- - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ------S--- - ----------  
Species Residue at Site 3079
in 'msaprobs'
muscle

The residue for every species at site 3079 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---PGHS--- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ------S--- - ----------  
Scheffersomyces.stipitis.SKY1 ------P--- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ------P--- - ----------  

Generated by PhyloBot at 02:28, October 16th 2019
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