cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3078 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3078 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3078 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3078 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -------S-- - ----------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -------S-- - ----------  
Danio.rerio.CDK1 -------P-- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -------P-- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -------P-- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -------P-- - ----------  
Candida.guilliermondii.IME2 -------P-- - ----------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -PQIGSNPRM R AGERTSGAAG Site 2242
Chlamydomonas.reinhardtii.LF4 -------P-- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -------P-- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ------KV-- - ----------  
Schizosaccharomyces.octosporus.b.IME2 -------P-- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul -------ANT N NNTSTSNTGG Site 1992
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -------N-- - --------AD  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -IEVLCKGYP A EFAIYLNYCR Site 1877
Suberites.domuncula.JNK..Stress.activated.protein. -------P-- - DDVFPNDTPE  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ----LQDS-- - ----------  
Aedes.aegypti.CDK1 -------K-- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ----LSQD-- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ----TSEA-- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -------K-- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -------E-- - ----------  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -------P-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -------T-- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -------H-- - --------SE  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -------P-- - ----------  
Strongylocentrotus.purpuratus.CDK1 -------P-- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -KSHPVEFAS Y FHYCHSLTFD Site 1893
Drosophila.melanogaster.CDK1 -------K-- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -AVTSIEDLT A GYPKEFQQYL Site 1869
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -------P-- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -------P-- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -------P-- - ----------  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -------P-- - DCLFPADSEH  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -------P-- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -------P-- - DCLFPADSEH  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -------P-- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -------S-- - ----------  
Bombus.terrestris.CDK1 -------P-- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -------S-- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -------P-- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -------P-- - DVLFPADSEH  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -------S-- - ----------  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -------A-- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -------K-- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -------C-- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ------AE-- - ----------  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -------N-- - --------AD  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -------S-- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -------P-- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -------E-- - ----------  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -------G-- - ----------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ------LG-- - ----------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ----TSEA-- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -------G-- - ----------  
Naegleria.gruberi.LF4 -------P-- - ----------  
Saccharomyces.bayanus.IME2 -------S-- - ----------  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -------H-- - --------SE  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -------P-- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -------T-- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ----PGHA-- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ----PGHS-- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -------K-- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ------LG-- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -------P-- - ----------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -------K-- - ----------  
Aspergillus.nidulans.IME2 -------P-- - ----------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi LYKRDNDGYW S HPKDCTSNSE Site 1933
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -----SPD-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -------P-- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -------P-- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -------P-- - DSLFPADSEH  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -------H-- - ----------  
Penicillium.marneffei.IME2 -------Q-- - ----------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -------I-- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -------P-- - ----------  
Drosophila.melanogaster.MAK -------S-- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ----TDEE-- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ----PEDQ-- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -------S-- - ----------  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ------GI-- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -------P-- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -------P-- - DSLFPADSEH  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -------P-- - DWIFPSESER  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ----LSQD-- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis FKKGDSNSCE H CFDEYNTNLE Site 1944
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 -------P-- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -------K-- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -------K-- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -------P-- - DWIFPSESDR  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -------H-- - --------SE  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ----HFYC-- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -------P-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -------P-- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -------H-- - --------SE  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -------G-- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -------P-- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ----PGHS-- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -------H-- - --------AE  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -------R-- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -------K-- - ----------  
Candida.orthopsilosis.IME2 -------P-- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -------S-- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- A DNMFPPGADN Site 1992
Debaryomyces.hansenii.IME2 -------P-- - ----------  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -------S-- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -------G-- - ----------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -------S-- - ----------  
Caenorhabditis.briggsae.CDK1 YDKKSGNY-- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -------H-- - --------SD  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -------P-- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -------K-- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -------P-- - ----------  
Monosiga.brevicollis.CDK1 -------K-- - ----------  
Saccharomyces.cerevisiae.SKY1 -------S-- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -------P-- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -------P-- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -------R-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -------P-- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -------P-- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -------P-- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ------LG-- - ----------  
Ajellomyces.capsulatus.CDK1 -------P-- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa -------P-- - ----------  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -------T-- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -------P-- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -------P-- - DVLFPADSEH  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -------P-- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -------P-- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -------G-- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -------P-- - DSLFPADSEH  
Saccharomyces.cerevisiae.CDK1 -------P-- - ----------  
Lodderomyces.elongisporus.IME2 -------P-- - ----------  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -------I-- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ----MMET-- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ------LG-- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -------K-- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -------K-- - ----------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ----LCHD-- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -------E-- - ----------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -------P-- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -------K-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 YDKKTGKH-- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -------P-- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -------R-- - ----------  
Salmo.salar.CDK1 -------P-- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -------I-- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -------P-- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -------R-- - ----------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 -------I-- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ------KV-- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ----LSHG-- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -------P-- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -------Q-- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -------E-- - ----------  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -------P-- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -------P-- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -------P-- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -------P-- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -------P-- D GLFPNDNNQN Site 1992
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -------P-- - ----------  
Candida.glabrata.IME2 -------C-- - ----------  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -------P-- - ----------  
Schizosaccharomyces.pombe.IME2 -------S-- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -------G-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -------P-- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -------E-- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -------P-- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -------S-- - ----------  
Branchiostoma.floridae.CDK1 -------A-- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ----TSEA-- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -------S-- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -----RIL-- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -------R-- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -------P-- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ----LQDS-- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ----SGHT-- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -------P-- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -------P-- - ----------  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -------I-- - ----------  
Lachancea.thermotolerans.SKY1 -------A-- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -------P-- - ----------  
Dictyostelium.discoideum.CDK1 -------P-- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -------T-- - ----------  
Xenopus.tropicalis.IME2 -------P-- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -------E-- - ----------  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -------H-- - --------SE  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -------P-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -------P-- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -------D-- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -------P-- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ----SGHT-- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -------R-- - ----------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -------R-- - ----------  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -------P-- - ----------  
Encephalitozoon.cuniculi.CDK1 -------R-- - ----------  
Saccharomyces.kluyveri.IME2 -------S-- - ----------  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ----LCHD-- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -------P-- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -------N-- - ----------  
Cryptococcus.neoformans.IME2 -------N-- - ----------  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -------E-- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -------P-- - ----------  
Candida.lusitaniae.IME2 -------P-- - ----------  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -------E-- - ----------  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ------KI-- - ----------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -------P-- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -------V-- - ----------  
Gallus.gallus.CDK2 -------P-- - ----------  
Emericella.nidulans.CDK1 -------P-- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -------T-- - ----------  
Homo.sapiens.CDK1 -------K-- - ----------  
Candida.albicans.CDK1 -------P-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -------H-- - --------SE  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -------P-- - ----------  
Mus.musculus.ICK..Serine.threonine.protein.kinase. -------P-- - ----------  
Saccharomyces.castelli.IME2 -------P-- - ----------  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ----MVQS-- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -------I-- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -------N-- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -------H-- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS LPDPKTNMDA V DAYELKKYQE Site 2016
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -------S-- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -------K-- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -------E-- - ----------  
Acyrthosiphon.pisum.CDK1 -------P-- - ----------  
Candida.tropicalis.CDK1 -------Q-- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ------KI-- - ----------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -------R-- - ----------  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -------H-- - --------SE  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -------P-- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -------N-- - --------AD  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -------P-- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -------P-- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---NGGNN-- - ----------  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -------P-- - ----------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -------R-- - ----------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -------P-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -------F-- - ----------  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -------H-- - --------SE  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -------E-- - ----------  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -------G-- - ----------  
Candida.dubliniensis.IME2 -------Q-- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -------P-- - DWIFPSESER  
Aspergillus.niger.IME2 -------Q-- - ----------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -------L-- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -------P-- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -------N-- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -------H-- - --------SE  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ----PGHS-- - ----------  
Schizosaccharomyces.japonicus.IME2 -------S-- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -------S-- - DNMFPMTADS  
Gallus.gallus.CDK1 -------Q-- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -------P-- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -------R-- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -------T-- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -------R-- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -------T-- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -------I-- - --------TS  
Kluyveromyces.waltii.IME2 -------A-- - ----------  
Debaryomyces.hansenii.SKY1 -------S-- - ----------  
Saccharomyces.cerevisiae.IME2 -------S-- - ----------  
Schizosaccharomyces.japonicus.b.IME2 -------P-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -------P-- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -------H-- - --------SE  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -------P-- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -------T-- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -------K-- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -------R-- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -------P-- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -------P-- - DVLFPADSDH  
Candida.albicans.IME2 -------Q-- - ----------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -------P-- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -------P-- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -------I-- - ----------  
Kluyveromyces.lactis.IME2 -------P-- - ----------  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -------P-- - ----------  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -------P-- - DSLFPADSEH  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -------R-- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -------H-- - ----------  
Amphimedon.queenslandica.CDK1 -------K-- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -------S-- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -------P-- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -------Q-- - ----------  
Neurospora.crassa.IME2 -------Q-- - ----------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -------P-- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th -------R-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -------P-- - ----------  
Hydra.magnipapillata.CDK1 -------P-- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -------P-- - ----------  
Ashbya.gossypii.IME2 -------C-- - ----------  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -------K-- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -------K-- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -------P-- - ----------  
Schizosaccharomyces.pombe.b.IME2 -------P-- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -------P-- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -------E-- - ----------  
Schizosaccharomyces.pombe.CDK1 -------P-- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ----LSEA-- - ----------  
Saccoglossus.kowalevskii.CDK1 -------G-- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -GYPSEFATY L NFCRSLRFDD Site 1894
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -------P-- - DVLFPADSEH  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -------P-- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -------P-- - ----------  
Yarrowia.lipolytica.IME2 -------C-- - ----------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -------G-- - ----------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -------P-- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K TPSLGPDDEE D IDDKIRSYKQ Site 2016
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -------K-- - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -------S-- - ----------  
Species Residue at Site 3078
in 'msaprobs'
muscle

The residue for every species at site 3078 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ----PGHS-- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -------S-- - ----------  
Scheffersomyces.stipitis.SKY1 -------P-- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -------P-- - ----------  

Generated by PhyloBot at 00:44, June 4th 2020
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