cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 3047 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3047 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3047 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3047 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --P--LNLR- - E---L-----  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ------PLF- - S---V-----  
Danio.rerio.CDK1 --R--QDLS- - K---V-----  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --R--QSFQ- - E---K-----  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d --T--MSLV- - N---V-----  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK --E--TNWS- - E---Q-----  
Candida.guilliermondii.IME2 --G--IPID- - E---F-----  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 --G--SGVA- - K---L-----  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --P--HTLE- - S---V-----  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -----IKYM- - E---K-----  
Schizosaccharomyces.octosporus.b.IME2 --P--YPLR- - K---L-----  
Candida.albicans.MAPK3..Extracellular.signal.regul --K--IPFS- - E---L-----  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. --R--KPWS- - K---F-----  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. --G--KSWK- - D---L-----  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase --C--KPLK- - S---Y-----  
Aedes.aegypti.CDK1 --Q--NNLT- - S---Q-----  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci --C--KPLK- - E---F-----  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase --C--KPLR- - R---Y-----  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos --S--KDLT- - M---V-----  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei --------GT D M---L----- Site 1999
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar --M--EPLE- - M---K-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --A--IPLG- - E---I-----  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --R--KRWE- - N---F-----  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --N--VPWA- - K---L-----  
Strongylocentrotus.purpuratus.CDK1 --P--QDFT- - K---I-----  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 --T--NQLT- - N---Q-----  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ------PLD- - R---L-----  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --P--QPLI- - N---H-----  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ------SLS- - E---A-----  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --G--LTFP- - K---L-----  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --R--EPLE- - R---R-----  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --G--LTFP- - K---L-----  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --R--KDFT- - Q---L-----  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --PSLPVLY- - T---L-----  
Bombus.terrestris.CDK1 --P--RPLD- - E---V-----  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ------GLF- - E---V-----  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --A--ESLD- - R---R-----  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --G--YSFE- - K---L-----  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --R--RRLR- - E---E-----  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. --G--SGIP- - L---L-----  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. --A--TPWE- - N---V-----  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G --G--IPWS- - S---V-----  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO DIGQVNVPTD L EGGQL----- Site 1995
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --R--KPWS- - K---F-----  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --PSLPVLY- - T---L-----  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --M--EPLE- - L---K-----  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei --------GS D L---L----- Site 1999
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --Y--NNLR- - K---R-----  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -HP--QTLD- - R---R-----  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci --C--KPLR- - R---Y-----  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --Y--NNLR- - K---R-----  
Naegleria.gruberi.LF4 --G--KGLK- - A---M-----  
Saccharomyces.bayanus.IME2 --G--SSLD- - H---L-----  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --R--KRWE- - N---F-----  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --K--KDLR- - I---L-----  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --A--TPFK- - Q---L-----  
Dictyostelium.discoideum.DYRK1..Probable.serine.th --K--KKLS- - E---IIGVET  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos --T--RRLQ- - E---VLGVQT  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos --S--REWG- - N---A-----  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -HP--QSLE- - R---R-----  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --Q--QTLD- - A---L-----  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos --S--KDLT- - M---V-----  
Aspergillus.nidulans.IME2 --P--HSME- - S---I-----  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ------PAAS K NTDHKASRVQ Site 1899
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --PDTQRLY- - K---I-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --P--INLK- - T---L-----  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep --R--QDFS- - K---V-----  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --G--LTFP- - K---L-----  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --A--HPWH- - K---I-----  
Penicillium.marneffei.IME2 --P--HSMS- - S---I-----  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --K--RNFA- - D---V-----  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --K--RPLR- - K---L-----  
Drosophila.melanogaster.MAK --K--VPLS- - S---V-----  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH --K--PVKF- - S---KPTKDI  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr --T--VMST- - I---NPTKDL  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --R--RRLR- - E---E-----  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -----NSLA- - K---C-----  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d --Y--NNLK- - H---K-----  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --G--LTFP- - K---L-----  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --G--IKFE- - E---L-----  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase --C--KPLK- - E---F-----  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ------AISE K TDHKASCLVQ Site 1899
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 --G--LTRT- - Q---I-----  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -----NLLP- - QWYQT-----  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --A--HPWT- - K---V-----  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --G--IKFE- - E---L-----  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --R--KRWE- - R---F-----  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U --C--KPLK- - E---R-----  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --K--RPLR- - K---L-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --A--EALL- - S---H-----  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --R--KRWE- - R---F-----  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -----PNLE- - AWYQS-----  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --K--KEFS- - L---L-----  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos --T--RRLQ- - E---VLGVQT  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --R--KRWE- - R---F-----  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --A--CQWR- - K---V-----  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --A--NPWP- - R---V-----  
Candida.orthopsilosis.IME2 --G--FTRA- - Q---I-----  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --G--TPLE- - H---I-----  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --P--VPFE- - T---L-----  
Debaryomyces.hansenii.IME2 --G--VQIC- - N---L-----  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --A--HPWT- - K---V-----  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -----DNLS- - VWYHS-----  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -----FNLN- - K---L-----  
Caenorhabditis.briggsae.CDK1 --E--NFLR- - D---K-----  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO --R--KRWE- - R---F-----  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --P--VPLE- - E---V-----  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos --S--KDWA- - T---A-----  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --A--QPIE- - K---F-----  
Monosiga.brevicollis.CDK1 --K--GCLN- - D---S-----  
Saccharomyces.cerevisiae.SKY1 ------PLE- - D---V-----  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --G--VDFK- - T---L-----  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --V--EPLE- - K---R-----  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --S--HPWQ- - K---V-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --R--QTLD- - A---L-----  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d AEA--EPLE- - S---R-----  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --Y--NNLR- - E---L-----  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -HP--QSLE- - R---R-----  
Ajellomyces.capsulatus.CDK1 --R--EDTR- - K---L-----  
Dictystelium.discoideum.MAPK3..Extracellular.signa --K--VNFA- - N---M-----  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --A--QPIE- - K---F-----  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --Y--NNLK- - H---K-----  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --G--YSFE- - K---L-----  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --K--KDFT- - Q---L-----  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --P--KRPK- - D---F-----  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --PSLSVLY- - M---L-----  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --G--LTFP- - K---L-----  
Saccharomyces.cerevisiae.CDK1 --R--KDLS- - Q---V-----  
Lodderomyces.elongisporus.IME2 --G--TNIH- - E---I-----  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --K--RNFA- - D---V-----  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un --C--KPLR- - R---Y-----  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -HP--QSLE- - R---R-----  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --P--IPLN- - R---I-----  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D --R--YSLD- - E---M-----  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase --C--KPLK- - E---F-----  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U --------GS D M---L----- Site 1999
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d --M--ETLE- - L---K-----  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --A--HPWT- - K---V-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --E--NFLR- - D---K-----  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep --P--RPVQ- - S---V-----  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -----SNPL- - APWYH-----  
Salmo.salar.CDK1 --R--QELS- - K---V-----  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --G--TPLH- - L---I-----  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --P--MPLE- - E---V-----  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --A--HPWT- - K---V-----  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 --R--FVLVT E L---E----- Site 1941
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -----IKYM- - E---K-----  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha --C--KPLR- - Q---Y-----  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --K--KDLS- - V---L-----  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --PNLQSLY- - R---L-----  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma --------GS D M---L----- Site 1999
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --K--VAWA- - K---L-----  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --P--QPLI- - N---H-----  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. --Y--NNLK- - H---K-----  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --M--EPLE- - L---K-----  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --G--YSFD- - R---L-----  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --K--RRIS- - T---V-----  
Candida.glabrata.IME2 --G--SSLE- - K---L-----  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. --P--INLK- - T---L-----  
Schizosaccharomyces.pombe.IME2 --P--LDFG- - D---L-----  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --K--IPFQ- - D---L-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl --I--TSWS- - Q---I-----  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --------DR E A---L----- Site 2012
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --P--QPLL- - S---H-----  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --M--ETLE- - E---K-----  
Branchiostoma.floridae.CDK1 --R--QDVT- - K---L-----  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara --C--KPLR- - R---Y-----  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --P--QPLS- - R---V-----  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ------MLE- - D---H-----  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --A--HPWN- - K---V-----  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --P--NNLK- - T---L-----  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci --C--KPLK- - S---Y-----  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos --T--RKLH- - N---ILGVET  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep --R--QDFS- - K---V-----  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --P--VPWE- - T---V-----  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --K--MNFA- - N---V-----  
Lachancea.thermotolerans.SKY1 ------PLK- - D---V-----  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --H--RPLT- - Q---L-----  
Dictyostelium.discoideum.CDK1 --G--QPYN- - K---I-----  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --K--KDFA- - S---V-----  
Xenopus.tropicalis.IME2 --R--QDFS- - K---V-----  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U --------GT D M---L----- Site 1999
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --R--KRWE- - R---F-----  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d --R--QDFS- - K---V-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --R--KEMK- - E---I-----  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --P--QSLQ- - I---V-----  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --P--RSLS- - D---M-----  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos --T--RKLH- - N---ILGVET  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --A--HPWT- - K---V-----  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --P--HPWS- - K---V-----  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD --Y--NNLK- - S---K-----  
Encephalitozoon.cuniculi.CDK1 --P--VDLK- - T---I-----  
Saccharomyces.kluyveri.IME2 --G--VNIE- - V---L-----  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci --C--KPLK- - E---F-----  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --K--VPWN- - R---L-----  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --P--RSLH- - V---V-----  
Cryptococcus.neoformans.IME2 --P--VRFR- - S---L-----  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --------DR E A---L----- Site 2012
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ------GLL- - E---V-----  
Candida.lusitaniae.IME2 --G--NSIH- - H---I-----  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom --------GT D M---L----- Site 1999
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -----VKYM- - E---R-----  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --P--IPLE- - E---I-----  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --T--EPLD- - M---R-----  
Gallus.gallus.CDK2 --R--QDLG- - K---V-----  
Emericella.nidulans.CDK1 --R--EDIQ- - N---V-----  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --G--SGIP- - L---L-----  
Homo.sapiens.CDK1 --P--GSLA- - S---H-----  
Candida.albicans.CDK1 --K--KPLS- - E---A-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca --R--KRWE- - R---F-----  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --P--VPWE- - T---V-----  
Mus.musculus.ICK..Serine.threonine.protein.kinase. --P--NNLK- - T---L-----  
Saccharomyces.castelli.IME2 --G--ISLD- - R---F-----  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec --C--KPLK- - Q---Y-----  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --G--VPLQ- - H---I-----  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --S--KSLR- - Q---A-----  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --A--HPWS- - K---V-----  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ------EYSV A FETFGFLQQE Site 1916
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --G--TPLE- - H---I-----  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --K--RKVK- - D---R-----  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei --------GS D M---L----- Site 1999
Acyrthosiphon.pisum.CDK1 --A--RLIE- - E---F-----  
Candida.tropicalis.CDK1 --G--MNIE- - D---V-----  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -----AKYM- - E---R-----  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --A--HPWN- - R---V-----  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --R--KRWE- - R---F-----  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --A--EALL- - S---H-----  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --R--KPWS- - K---F-----  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --P--QPLI- - N---H-----  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --K--KDLS- - V---L-----  
Candida.albicans.SSN3..Serine.threonine.protein.ki -----NNLS- - NWFKL-----  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --G--TGIE- - K---L-----  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --P--HPWS- - K---V-----  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --H--RDFS- - T---L-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de --P--RTLE- - T---A-----  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --R--KRWE- - R---F-----  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U --------GS D L---M----- Site 1999
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --Y--NNLR- - K---R-----  
Candida.dubliniensis.IME2 --G--TTIE- - E---I-----  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --G--IKFE- - E---L-----  
Aspergillus.niger.IME2 --P--HSME- - S---I-----  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --K--MNFE- - D---V-----  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -HP--KNAR- - K---K-----  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --S--KNLR- - Q---A-----  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --R--KRWE- - R---F-----  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty --A--RKLH- - E---ILGVTS  
Schizosaccharomyces.japonicus.IME2 --P--LSFH- - E---L-----  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --A--TPFE- - V---L-----  
Gallus.gallus.CDK1 --P--GSLG- - T---H-----  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep --T--TSLV- - N---V-----  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P --P--HPFN- - K---V-----  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE --G--ISMT- - S---D-----  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --A--HPWN- - K---V-----  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --K--KDFA- - S---I-----  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --K--KSWT- - H---F-----  
Kluyveromyces.waltii.IME2 --G--TSIE- - S---I-----  
Debaryomyces.hansenii.SKY1 ------SLK- - D---V-----  
Saccharomyces.cerevisiae.IME2 --G--SSLD- - H---L-----  
Schizosaccharomyces.japonicus.b.IME2 --P--YPIE- - N---L-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --P--QPIE- - N---V-----  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --R--KRWE- - N---F-----  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --H--KPLT- - Q---L-----  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --A--QPIE- - K---F-----  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --P--ITLA- - E---I-----  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --K--KDFG- - S---L-----  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -HP--KTAR- - K---K-----  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --G--YSFE- - K---L-----  
Candida.albicans.IME2 --G--MSIE- - D---I-----  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --Q--QPVD- - K---F-----  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k --Y--NNLK- - S---K-----  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --K--MNFA- - N---V-----  
Kluyveromyces.lactis.IME2 --G--KTIR- - D---V-----  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --P--VPWE- - T---V-----  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --G--LTFP- - K---L-----  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --Q--KDLS- - S---I-----  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --Q--KDLS- - S---V-----  
Amphimedon.queenslandica.CDK1 --R--QNLQ- - R---I-----  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d --M--ETLE- - E---K-----  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --R--KEMK- - D---I-----  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME --V--SQLR- - K---H-----  
Neurospora.crassa.IME2 --P--HSMD- - T---I-----  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME --I--TSWS- - Q---L-----  
Dictyostelium.discoideum.DYRK2..Probable.serine.th --T--KSFK- - D---S-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep --P--RPVQ- - S---V-----  
Hydra.magnipapillata.CDK1 --P--QPFQ- - T---F-----  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar --Y--NNLK- - H---K-----  
Ashbya.gossypii.IME2 --G--KDIS- - W---V-----  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos --S--KDWG- - T---A-----  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p --P--IPLS- - R---V-----  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --Q--VPLD- - E---I-----  
Schizosaccharomyces.pombe.b.IME2 --P--YPIQ- - K---L-----  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a --K--VPWN- - R---L-----  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom --------GG D L---L----- Site 1999
Schizosaccharomyces.pombe.CDK1 --R--MDLH- - K---V-----  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch --C--KPLR- - R---Y-----  
Saccoglossus.kowalevskii.CDK1 --Q--QDLS- - K---V-----  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --G--YSFE- - K---L-----  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep --R--KGLE- - E---I-----  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep --R--KGLE- - E---I-----  
Yarrowia.lipolytica.IME2 --G--QSSN- - S---I-----  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -----DNLA- - TWYHS-----  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli --R--QDLS- - K---V-----  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ------EEGT L PEYSIAFETL Site 1908
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --P--HPFN- - K---V-----  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --P--QPLS- - R---V-----  
Species Residue at Site 3047
in 'msaprobs'
muscle

The residue for every species at site 3047 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro --A--RKLH- - E---ILGVTS  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --PSLPVLY- - T---L-----  
Scheffersomyces.stipitis.SKY1 ------GLK- - E---V-----  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep --T--TSLV- - N---V-----  

Generated by PhyloBot at 08:57, November 24th 2020
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