cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 3043 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3043 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3043 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3043 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --A---P--L N LR--E---L- Site 1941
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- P LF--S---V- Site 1933
Danio.rerio.CDK1 --A---R--Q D LS--K---V- Site 1941
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --R---R--Q S FQ--E---K- Site 1941
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d --PA--T--M S LV--N---V- Site 1941
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK --PA--E--T N WS--E---Q- Site 1941
Candida.guilliermondii.IME2 --T---G--I P ID--E---F- Site 1941
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 --E---G--S G VA--K---L- Site 1941
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --R---P--H T LE--S---V- Site 1941
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------I K YM--E---K- Site 1944
Schizosaccharomyces.octosporus.b.IME2 --R---P--Y P LR--K---L- Site 1941
Candida.albicans.MAPK3..Extracellular.signal.regul --K---K--I P FS--E---L- Site 1941
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. --S---R--K P WS--K---F- Site 1911
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. --A---G--K S WK--D---L- Site 1941
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ------C--K P LK--S---Y- Site 1941
Aedes.aegypti.CDK1 --T---Q--N N LT--S---Q- Site 1938
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ------C--K P LK--E---F- Site 1941
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ------C--K P LR--R---Y- Site 1941
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ------S--K D LT--M---V- Site 1941
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - -GTDM---L-  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar --ES--M--E P LE--M---K- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --K---A--I P LG--E---I- Site 1941
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --S---R--K R WE--N---F- Site 1904
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --P---N--V P WA--K---L- Site 1941
Strongylocentrotus.purpuratus.CDK1 --T---P--Q D FT--K---I- Site 1941
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 --S---T--N Q LT--N---Q- Site 1938
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- P LD--R---L- Site 1933
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --L---P--Q P LI--N---H- Site 1941
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. --S------- S LS--E---A- Site 1937
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --A---G--L T FP--K---L- Site 1941
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --KE--R--E P LE--R---R- Site 1941
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --A---G--L T FP--K---L- Site 1941
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --P---R--K D FT--Q---L- Site 1941
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --Q---PSLP V LY--T---L- Site 1942
Bombus.terrestris.CDK1 --E---P--R P LD--E---V- Site 1941
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- G LF--E---V- Site 1933
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --KE--A--E S LD--R---R- Site 1941
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --A---G--Y S FE--K---L- Site 1941
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --Y---R--R R LR--E---E- Site 1941
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. --K---G--S G IP--L---L- Site 1939
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. --K---A--T P WE--N---V- Site 1941
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G --K---G--I P WS--S---V- Site 1941
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO NCLDDIGQVN V PTDLEGGQL- Site 1991
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --S---R--K P WS--K---F- Site 1911
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --Q---PSLP V LY--T---L- Site 1942
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --ED--M--E P LE--L---K- Site 1941
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- - -GSDL---L-  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --P---Y--N N LR--K---R- Site 1941
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --S--HP--Q T LD--R---R- Site 1937
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ------C--K P LR--R---Y- Site 1941
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --P---Y--N N LR--K---R- Site 1941
Naegleria.gruberi.LF4 --A---G--K G LK--A---M- Site 1941
Saccharomyces.bayanus.IME2 --E---G--S S LD--H---L- Site 1941
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --S---R--K R WE--N---F- Site 1904
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --R---K--K D LR--I---L- Site 1941
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --P---A--T P FK--Q---L- Site 1941
Dictyostelium.discoideum.DYRK1..Probable.serine.th ------K--K K LS--E---II Site 1941
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ------T--R R LQ--E---VL Site 1989
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ------S--R E WG--N---A- Site 1941
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --N--HP--Q S LE--R---R- Site 1937
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --P---Q--Q T LD--A---L- Site 1941
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ------S--K D LT--M---V- Site 1941
Aspergillus.nidulans.IME2 --A---P--H S ME--S---I- Site 1941
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- P AASKNTDHKA Site 1895
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --A---PDTQ R LY--K---I- Site 1944
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --I---P--I N LK--T---L- Site 1941
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep --A---R--Q D FS--K---V- Site 1941
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --A---G--L T FP--K---L- Site 1941
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --K---A--H P WH--K---I- Site 1941
Penicillium.marneffei.IME2 --A---P--H S MS--S---I- Site 1941
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --P---K--R N FA--D---V- Site 1941
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --V---K--R P LR--K---L- Site 1941
Drosophila.melanogaster.MAK --I---K--V P LS--S---V- Site 1941
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ------K--P V KF--S---KP Site 1932
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ------T--V M ST--I---NP Site 1908
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --Y---R--R R LR--E---E- Site 1941
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------N S LA--K---C- Site 1933
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d --P---Y--N N LK--H---K- Site 1941
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --A---G--L T FP--K---L- Site 1941
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --P---G--I K FE--E---L- Site 1941
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ------C--K P LK--E---F- Site 1995
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- A ISEKTDHKAS Site 1895
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 --R---G--L T RT--Q---I- Site 1941
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p --N------N L LP--QWYQT- Site 1945
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --K---A--H P WT--K---V- Site 1941
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --P---G--I K FE--E---L- Site 1941
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --S---R--K R WE--R---F- Site 1904
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ------C--K P LK--E---R- Site 1938
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --V---K--R P LR--K---L- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --R---A--E A LL--S---H- Site 1941
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --S---R--K R WE--R---F- Site 1911
Yarrowia.lipolytica.SSN3..Serine.threonine.protein --P------P N LE--AWYQS- Site 1938
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --P---K--K E FS--L---L- Site 1941
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ------T--R R LQ--E---VL Site 1989
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --S---R--K R WE--R---F- Site 1911
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --K---A--C Q WR--K---V- Site 1941
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --K---A--N P WP--R---V- Site 1941
Candida.orthopsilosis.IME2 --R---G--F T RA--Q---I- Site 1941
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --P---G--T P LE--H---I- Site 1941
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --Q---P--V P FE--T---L- Site 1941
Debaryomyces.hansenii.IME2 --D---G--V Q IC--N---L- Site 1941
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --K---A--H P WT--K---V- Site 1941
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin --R------D N LS--VWYHS- Site 1938
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --S------F N LN--K---L- Site 1938
Caenorhabditis.briggsae.CDK1 --R---E--N F LR--D---K- Site 1940
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO --S---R--K R WE--R---F- Site 1911
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --A---P--V P LE--E---V- Site 1941
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ------S--K D WA--T---A- Site 1941
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --P---A--Q P IE--K---F- Site 1941
Monosiga.brevicollis.CDK1 --K---K--G C LN--D---S- Site 1938
Saccharomyces.cerevisiae.SKY1 ---------- P LE--D---V- Site 1933
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --P---G--V D FK--T---L- Site 1941
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --HA--V--E P LE--K---R- Site 1941
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --K---S--H P WQ--K---V- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --P---R--Q T LD--A---L- Site 1941
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d --KDAEA--E P LE--S---R- Site 1941
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --P---Y--N N LR--E---L- Site 1941
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --N--HP--Q S LE--R---R- Site 1937
Ajellomyces.capsulatus.CDK1 --K---R--E D TR--K---L- Site 1938
Dictystelium.discoideum.MAPK3..Extracellular.signa --P---K--V N FA--N---M- Site 1941
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --S---A--Q P IE--K---F- Site 1941
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --P---Y--N N LK--H---K- Site 1941
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --A---G--Y S FE--K---L- Site 1941
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --P---K--K D FT--Q---L- Site 1941
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --H---P--K R PK--D---F- Site 1933
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --P---PSLS V LY--M---L- Site 1942
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --A---G--L T FP--K---L- Site 1941
Saccharomyces.cerevisiae.CDK1 --R---R--K D LS--Q---V- Site 1941
Lodderomyces.elongisporus.IME2 --P---G--T N IH--E---I- Site 1941
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --P---K--R N FA--D---V- Site 1941
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ------C--K P LR--R---Y- Site 1941
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --N--HP--Q S LE--R---R- Site 1937
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --R---P--I P LN--R---I- Site 1941
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D --R---R--Y S LD--E---M- Site 1941
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ------C--K P LK--E---F- Site 1941
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - -GSDM---L-  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d --ED--M--E T LE--L---K- Site 1941
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --K---A--H P WT--K---V- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --R---E--N F LR--D---K- Site 1940
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep --G---P--R P VQ--S---V- Site 1941
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------S N PL--APWYH- Site 1914
Salmo.salar.CDK1 --A---R--Q E LS--K---V- Site 1941
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --P---G--T P LH--L---I- Site 1941
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --V---P--M P LE--E---V- Site 1941
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --K---A--H P WT--K---V- Site 1941
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 --R---R--F V LVTEL---E- Site 1937
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------I K YM--E---K- Site 1944
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ------C--K P LR--Q---Y- Site 1941
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --P---K--K D LS--V---L- Site 1941
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --A---PNLQ S LY--R---L- Site 1944
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - -GSDM---L-  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --T---K--V A WA--K---L- Site 1941
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --K---P--Q P LI--N---H- Site 1941
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. --P---Y--N N LK--H---K- Site 1941
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --QE--M--E P LE--L---K- Site 1941
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --T---G--Y S FD--R---L- Site 1941
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --E---K--R R IS--T---V- Site 1941
Candida.glabrata.IME2 --E---G--S S LE--K---L- Site 1941
Homo.sapiens.MAK..Serine.threonine.protein.kinase. --V---P--I N LK--T---L- Site 1941
Schizosaccharomyces.pombe.IME2 --A---P--L D FG--D---L- Site 1941
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --K---K--I P FQ--D---L- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl --PA--I--T S WS--Q---I- Site 1941
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - -DREA---L-  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --L---P--Q P LL--S---H- Site 1941
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --ED--M--E T LE--E---K- Site 1941
Branchiostoma.floridae.CDK1 --P---R--Q D VT--K---L- Site 1941
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ------C--K P LR--R---Y- Site 1941
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --R---P--Q P LS--R---V- Site 1941
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --QT------ M LE--D---H- Site 1938
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --K---A--H P WN--K---V- Site 1941
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --V---P--N N LK--T---L- Site 1941
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ------C--K P LK--S---Y- Site 1941
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ------T--R K LH--N---IL Site 1989
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep --A---R--Q D FS--K---V- Site 1941
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --Q---P--V P WE--T---V- Site 1941
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --P---K--M N FA--N---V- Site 1941
Lachancea.thermotolerans.SKY1 ---------- P LK--D---V- Site 1933
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --P---H--R P LT--Q---L- Site 1941
Dictyostelium.discoideum.CDK1 --P---G--Q P YN--K---I- Site 1941
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --E---K--K D FA--S---V- Site 1941
Xenopus.tropicalis.IME2 --V---R--Q D FS--K---V- Site 1941
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- - -GTDM---L-  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --S---R--K R WE--R---F- Site 1904
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d --I---R--Q D FS--K---V- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --A---R--K E MK--E---I- Site 1941
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --K---P--Q S LQ--I---V- Site 1941
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --N---P--R S LS--D---M- Site 1941
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ------T--R K LH--N---IL Site 1989
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --K---A--H P WT--K---V- Site 1941
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --K---P--H P WS--K---V- Site 1941
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD --P---Y--N N LK--S---K- Site 1941
Encephalitozoon.cuniculi.CDK1 --D---P--V D LK--T---I- Site 1941
Saccharomyces.kluyveri.IME2 --E---G--V N IE--V---L- Site 1941
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ------C--K P LK--E---F- Site 1941
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --N---K--V P WN--R---L- Site 1941
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --T---P--R S LH--V---V- Site 1941
Cryptococcus.neoformans.IME2 --K---P--V R FR--S---L- Site 1941
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - -DREA---L-  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- G LL--E---V- Site 1933
Candida.lusitaniae.IME2 --I---G--N S IH--H---I- Site 1941
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - -GTDM---L-  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------V K YM--E---R- Site 1944
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --P---P--I P LE--E---I- Site 1941
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --DG--T--E P LD--M---R- Site 1941
Gallus.gallus.CDK2 --A---R--Q D LG--K---V- Site 1941
Emericella.nidulans.CDK1 --K---R--E D IQ--N---V- Site 1941
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --K---G--S G IP--L---L- Site 1939
Homo.sapiens.CDK1 --K---P--G S LA--S---H- Site 1938
Candida.albicans.CDK1 --K---K--K P LS--E---A- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca --S---R--K R WE--R---F- Site 1904
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --Q---P--V P WE--T---V- Site 1941
Mus.musculus.ICK..Serine.threonine.protein.kinase. --I---P--N N LK--T---L- Site 1941
Saccharomyces.castelli.IME2 --E---G--I S LD--R---F- Site 1941
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ------C--K P LK--Q---Y- Site 1941
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --P---G--V P LQ--H---I- Site 1941
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --S---S--K S LR--Q---A- Site 1941
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --K---A--H P WS--K---V- Site 1941
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- E YSVAFETFGF Site 1912
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --P---G--T P LE--H---I- Site 1941
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --Q---K--R K VK--D---R- Site 1941
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - -GSDM---L-  
Acyrthosiphon.pisum.CDK1 --E---A--R L IE--E---F- Site 1938
Candida.tropicalis.CDK1 --P---G--M N IE--D---V- Site 1941
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------A K YM--E---R- Site 1944
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --K---A--H P WN--R---V- Site 1941
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --S---R--K R WE--R---F- Site 1904
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --R---A--E A LL--S---H- Site 1941
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --S---R--K P WS--K---F- Site 1911
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --K---P--Q P LI--N---H- Site 1941
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --P---K--K D LS--V---L- Site 1941
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------N N LS--NWFKL- Site 1938
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --S---G--T G IE--K---L- Site 1941
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --K---P--H P WS--K---V- Site 1941
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --P---H--R D FS--T---L- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ------P--R T LE--T---A- Site 1940
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --S---R--K R WE--R---F- Site 1904
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - -GSDL---M-  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --P---Y--N N LR--K---R- Site 1941
Candida.dubliniensis.IME2 --T---G--T T IE--E---I- Site 1941
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --P---G--I K FE--E---L- Site 1941
Aspergillus.niger.IME2 --A---P--H S ME--S---I- Site 1941
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --P---K--M N FE--D---V- Site 1941
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d --Q--HP--K N AR--K---K- Site 1937
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --S---S--K N LR--Q---A- Site 1941
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --S---R--K R WE--R---F- Site 1904
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ------A--R K LH--E---IL Site 1941
Schizosaccharomyces.japonicus.IME2 --M---P--L S FH--E---L- Site 1941
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --Q---A--T P FE--V---L- Site 1941
Gallus.gallus.CDK1 --K---P--G S LG--T---H- Site 1938
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep --PA--T--T S LV--N---V- Site 1941
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P --K---P--H P FN--K---V- Site 1941
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE --T---G--I S MT--S---D- Site 1941
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --K---A--H P WN--K---V- Site 1941
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --E---K--K D FA--S---I- Site 1941
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --T---K--K S WT--H---F- Site 1941
Kluyveromyces.waltii.IME2 --E---G--T S IE--S---I- Site 1941
Debaryomyces.hansenii.SKY1 ---------- S LK--D---V- Site 1933
Saccharomyces.cerevisiae.IME2 --E---G--S S LD--H---L- Site 1941
Schizosaccharomyces.japonicus.b.IME2 --L---P--Y P IE--N---L- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --Q---P--Q P IE--N---V- Site 1941
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --S---R--K R WE--N---F- Site 1911
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --P---H--K P LT--Q---L- Site 1941
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --S---A--Q P IE--K---F- Site 1941
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --K---P--I T LA--E---I- Site 1941
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --Q---K--K D FG--S---L- Site 1941
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de --Q--HP--K T AR--K---K- Site 1941
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --A---G--Y S FE--K---L- Site 1941
Candida.albicans.IME2 --S---G--M S IE--D---I- Site 1941
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --T---Q--Q P VD--K---F- Site 1941
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k --P---Y--N N LK--S---K- Site 1941
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --P---K--M N FA--N---V- Site 1941
Kluyveromyces.lactis.IME2 --E---G--K T IR--D---V- Site 1941
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --Q---P--V P WE--T---V- Site 1941
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --A---G--L T FP--K---L- Site 1941
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --P---Q--K D LS--S---I- Site 1941
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --P---Q--K D LS--S---V- Site 1941
Amphimedon.queenslandica.CDK1 --P---R--Q N LQ--R---I- Site 1938
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d --ED--M--E T LE--E---K- Site 1941
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --P---R--K E MK--D---I- Site 1938
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME --P---V--S Q LR--K---H- Site 1941
Neurospora.crassa.IME2 --A---P--H S MD--T---I- Site 1941
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME --PA--I--T S WS--Q---L- Site 1941
Dictyostelium.discoideum.DYRK2..Probable.serine.th ------T--K S FK--D---S- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep --G---P--R P VQ--S---V- Site 1941
Hydra.magnipapillata.CDK1 --R---P--Q P FQ--T---F- Site 1941
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar --P---Y--N N LK--H---K- Site 1941
Ashbya.gossypii.IME2 --E---G--K D IS--W---V- Site 1939
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ------S--K D WG--T---A- Site 1941
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p --K---P--I P LS--R---V- Site 1941
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --P---Q--V P LD--E---I- Site 1941
Schizosaccharomyces.pombe.b.IME2 --K---P--Y P IQ--K---L- Site 1941
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a --N---K--V P WN--R---L- Site 1941
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - -GGDL---L-  
Schizosaccharomyces.pombe.CDK1 --K---R--M D LH--K---V- Site 1941
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ------C--K P LR--R---Y- Site 1941
Saccoglossus.kowalevskii.CDK1 --P---Q--Q D LS--K---V- Site 1941
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --A---G--Y S FE--K---L- Site 1941
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep --S---R--K G LE--E---I- Site 1941
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep --T---R--K G LE--E---I- Site 1941
Yarrowia.lipolytica.IME2 --T---G--Q S SN--S---I- Site 1941
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil --R------D N LA--TWYHS- Site 1938
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli --A---R--Q D LS--K---V- Site 1941
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- E EGTLPEYSIA Site 1904
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --K---P--H P FN--K---V- Site 1941
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --R---P--Q P LS--R---V- Site 1941
Species Residue at Site 3043
in 'msaprobs'
muscle

The residue for every species at site 3043 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ------A--R K LH--E---IL Site 1941
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --Q---PSLP V LY--T---L- Site 1942
Scheffersomyces.stipitis.SKY1 ---------- G LK--E---V- Site 1933
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep --PA--T--T S LV--N---V- Site 1941

Generated by PhyloBot at 15:34, October 23rd 2019
Questions/Comments? help@phylobot.com