cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 3042 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3042 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3042 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3042 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---A---P-- L NLR--E---L Site 1940
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - PLF--S---V  
Danio.rerio.CDK1 ---A---R-- Q DLS--K---V Site 1940
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---R---R-- Q SFQ--E---K Site 1940
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---PA--T-- M SLV--N---V Site 1940
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---PA--E-- T NWS--E---Q Site 1940
Candida.guilliermondii.IME2 ---T---G-- I PID--E---F Site 1940
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---E---G-- S GVA--K---L Site 1940
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---R---P-- H TLE--S---V Site 1940
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- I KYM--E---K Site 1943
Schizosaccharomyces.octosporus.b.IME2 ---R---P-- Y PLR--K---L Site 1940
Candida.albicans.MAPK3..Extracellular.signal.regul ---K---K-- I PFS--E---L Site 1940
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---S---R-- K PWS--K---F Site 1880
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---A---G-- K SWK--D---L Site 1940
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -------C-- K PLK--S---Y Site 1940
Aedes.aegypti.CDK1 ---T---Q-- N NLT--S---Q Site 1937
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -------C-- K PLK--E---F Site 1940
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -------C-- K PLR--R---Y Site 1940
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -------S-- K DLT--M---V Site 1940
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - --GTDM---L  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---ES--M-- E PLE--M---K Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---K---A-- I PLG--E---I Site 1940
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---S---R-- K RWE--N---F Site 1903
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---P---N-- V PWA--K---L Site 1940
Strongylocentrotus.purpuratus.CDK1 ---T---P-- Q DFT--K---I Site 1939
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---S---T-- N QLT--N---Q Site 1937
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - PLD--R---L  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---L---P-- Q PLI--N---H Site 1940
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---S------ - SLS--E---A  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---A---G-- L TFP--K---L Site 1940
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---KE--R-- E PLE--R---R Site 1940
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---A---G-- L TFP--K---L Site 1940
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---P---R-- K DFT--Q---L Site 1940
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---Q---PSL P VLY--T---L Site 1941
Bombus.terrestris.CDK1 ---E---P-- R PLD--E---V Site 1939
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - GLF--E---V  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---KE--A-- E SLD--R---R Site 1940
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---A---G-- Y SFE--K---L Site 1940
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---Y---R-- R RLR--E---E Site 1940
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---K---G-- S GIP--L---L Site 1938
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---K---A-- T PWE--N---V Site 1940
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---K---G-- I PWS--S---V Site 1940
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO FNCLDDIGQV N VPTDLEGGQL Site 1990
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---S---R-- K PWS--K---F Site 1903
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---Q---PSL P VLY--T---L Site 1941
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---ED--M-- E PLE--L---K Site 1940
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- - --GSDL---L  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---P---Y-- N NLR--K---R Site 1940
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---S--HP-- Q TLD--R---R Site 1936
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -------C-- K PLR--R---Y Site 1940
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---P---Y-- N NLR--K---R Site 1940
Naegleria.gruberi.LF4 ---A---G-- K GLK--A---M Site 1940
Saccharomyces.bayanus.IME2 ---E---G-- S SLD--H---L Site 1940
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---S---R-- K RWE--N---F Site 1903
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---R---K-- K DLR--I---L Site 1940
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---P---A-- T PFK--Q---L Site 1940
Dictyostelium.discoideum.DYRK1..Probable.serine.th -------K-- K KLS--E---I Site 1940
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -------T-- R RLQ--E---V Site 1988
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -------S-- R EWG--N---A Site 1940
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---N--HP-- Q SLE--R---R Site 1936
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---P---Q-- Q TLD--A---L Site 1940
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -------S-- K DLT--M---V Site 1940
Aspergillus.nidulans.IME2 ---A---P-- H SME--S---I Site 1940
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - PAASKNTDHK  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---A---PDT Q RLY--K---I Site 1943
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---I---P-- I NLK--T---L Site 1939
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---A---R-- Q DFS--K---V Site 1940
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---A---G-- L TFP--K---L Site 1940
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---K---A-- H PWH--K---I Site 1940
Penicillium.marneffei.IME2 ---A---P-- H SMS--S---I Site 1939
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---P---K-- R NFA--D---V Site 1940
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---V---K-- R PLR--K---L Site 1940
Drosophila.melanogaster.MAK ---I---K-- V PLS--S---V Site 1940
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -------K-- P VKF--S---K Site 1911
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -------T-- V MST--I---N Site 1907
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---Y---R-- R RLR--E---E Site 1940
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- N SLA--K---C Site 1932
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---P---Y-- N NLK--H---K Site 1940
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---A---G-- L TFP--K---L Site 1940
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---P---G-- I KFE--E---L Site 1940
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -------C-- K PLK--E---F Site 1994
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - AISEKTDHKA  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---R---G-- L TRT--Q---I Site 1940
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---N------ N LLP--QWYQT Site 1944
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---K---A-- H PWT--K---V Site 1940
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---P---G-- I KFE--E---L Site 1940
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---S---R-- K RWE--R---F Site 1903
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -------C-- K PLK--E---R Site 1937
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---V---K-- R PLR--K---L Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---R---A-- E ALL--S---H Site 1940
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---S---R-- K RWE--R---F Site 1903
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---P------ P NLE--AWYQS Site 1933
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---P---K-- K EFS--L---L Site 1940
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -------T-- R RLQ--E---V Site 1988
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---S---R-- K RWE--R---F Site 1903
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---K---A-- C QWR--K---V Site 1940
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---K---A-- N PWP--R---V Site 1940
Candida.orthopsilosis.IME2 ---R---G-- F TRA--Q---I Site 1940
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---P---G-- T PLE--H---I Site 1940
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---Q---P-- V PFE--T---L Site 1940
Debaryomyces.hansenii.IME2 ---D---G-- V QIC--N---L Site 1940
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---K---A-- H PWT--K---V Site 1940
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---R------ D NLS--VWYHS Site 1937
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---S------ F NLN--K---L Site 1937
Caenorhabditis.briggsae.CDK1 ---R---E-- N FLR--D---K Site 1939
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---S---R-- K RWE--R---F Site 1903
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---A---P-- V PLE--E---V Site 1940
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -------S-- K DWA--T---A Site 1940
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---P---A-- Q PIE--K---F Site 1940
Monosiga.brevicollis.CDK1 ---K---K-- G CLN--D---S Site 1937
Saccharomyces.cerevisiae.SKY1 ---------- - PLE--D---V  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---P---G-- V DFK--T---L Site 1940
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---HA--V-- E PLE--K---R Site 1940
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---K---S-- H PWQ--K---V Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---P---R-- Q TLD--A---L Site 1940
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---KDAEA-- E PLE--S---R Site 1940
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---P---Y-- N NLR--E---L Site 1940
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---N--HP-- Q SLE--R---R Site 1936
Ajellomyces.capsulatus.CDK1 ---K---R-- E DTR--K---L Site 1937
Dictystelium.discoideum.MAPK3..Extracellular.signa ---P---K-- V NFA--N---M Site 1940
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---S---A-- Q PIE--K---F Site 1940
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---P---Y-- N NLK--H---K Site 1940
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---A---G-- Y SFE--K---L Site 1940
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---P---K-- K DFT--Q---L Site 1940
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---H---P-- K RPK--D---F Site 1932
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---P---PSL S VLY--M---L Site 1941
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---A---G-- L TFP--K---L Site 1940
Saccharomyces.cerevisiae.CDK1 ---R---R-- K DLS--Q---V Site 1940
Lodderomyces.elongisporus.IME2 ---P---G-- T NIH--E---I Site 1940
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---P---K-- R NFA--D---V Site 1940
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -------C-- K PLR--R---Y Site 1940
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---N--HP-- Q SLE--R---R Site 1936
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---R---P-- I PLN--R---I Site 1940
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---R---R-- Y SLD--E---M Site 1940
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -------C-- K PLK--E---F Site 1940
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - --GSDM---L  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---ED--M-- E TLE--L---K Site 1940
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---K---A-- H PWT--K---V Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---R---E-- N FLR--D---K Site 1939
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---G---P-- R PVQ--S---V Site 1940
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- S NPL--APWYH Site 1913
Salmo.salar.CDK1 ---A---R-- Q ELS--K---V Site 1940
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---P---G-- T PLH--L---I Site 1940
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---V---P-- M PLE--E---V Site 1940
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---K---A-- H PWT--K---V Site 1940
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---R---R-- F VLVTEL---E Site 1936
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- I KYM--E---K Site 1943
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -------C-- K PLR--Q---Y Site 1940
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---P---K-- K DLS--V---L Site 1940
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---A---PNL Q SLY--R---L Site 1943
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - --GSDM---L  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---T---K-- V AWA--K---L Site 1940
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---K---P-- Q PLI--N---H Site 1940
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---P---Y-- N NLK--H---K Site 1940
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---QE--M-- E PLE--L---K Site 1940
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---T---G-- Y SFD--R---L Site 1940
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---E---K-- R RIS--T---V Site 1940
Candida.glabrata.IME2 ---E---G-- S SLE--K---L Site 1940
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---V---P-- I NLK--T---L Site 1940
Schizosaccharomyces.pombe.IME2 ---A---P-- L DFG--D---L Site 1940
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---K---K-- I PFQ--D---L Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---PA--I-- T SWS--Q---I Site 1940
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - --DREA---L  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---L---P-- Q PLL--S---H Site 1940
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---ED--M-- E TLE--E---K Site 1940
Branchiostoma.floridae.CDK1 ---P---R-- Q DVT--K---L Site 1939
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -------C-- K PLR--R---Y Site 1940
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---R---P-- Q PLS--R---V Site 1940
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---QT----- - MLE--D---H  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---K---A-- H PWN--K---V Site 1940
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---V---P-- N NLK--T---L Site 1940
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -------C-- K PLK--S---Y Site 1940
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -------T-- R KLH--N---I Site 1988
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---A---R-- Q DFS--K---V Site 1940
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---Q---P-- V PWE--T---V Site 1940
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---P---K-- M NFA--N---V Site 1940
Lachancea.thermotolerans.SKY1 ---------- - PLK--D---V  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---P---H-- R PLT--Q---L Site 1940
Dictyostelium.discoideum.CDK1 ---P---G-- Q PYN--K---I Site 1939
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---E---K-- K DFA--S---V Site 1940
Xenopus.tropicalis.IME2 ---V---R-- Q DFS--K---V Site 1940
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- - --GTDM---L  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---S---R-- K RWE--R---F Site 1903
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---I---R-- Q DFS--K---V Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---A---R-- K EMK--E---I Site 1939
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---K---P-- Q SLQ--I---V Site 1940
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---N---P-- R SLS--D---M Site 1940
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -------T-- R KLH--N---I Site 1988
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---K---A-- H PWT--K---V Site 1940
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---K---P-- H PWS--K---V Site 1940
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---P---Y-- N NLK--S---K Site 1940
Encephalitozoon.cuniculi.CDK1 ---D---P-- V DLK--T---I Site 1940
Saccharomyces.kluyveri.IME2 ---E---G-- V NIE--V---L Site 1940
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -------C-- K PLK--E---F Site 1940
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---N---K-- V PWN--R---L Site 1940
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---T---P-- R SLH--V---V Site 1940
Cryptococcus.neoformans.IME2 ---K---P-- V RFR--S---L Site 1940
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - --DREA---L  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - GLL--E---V  
Candida.lusitaniae.IME2 ---I---G-- N SIH--H---I Site 1940
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - --GTDM---L  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- V KYM--E---R Site 1943
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---P---P-- I PLE--E---I Site 1940
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---DG--T-- E PLD--M---R Site 1940
Gallus.gallus.CDK2 ---A---R-- Q DLG--K---V Site 1940
Emericella.nidulans.CDK1 ---K---R-- E DIQ--N---V Site 1940
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---K---G-- S GIP--L---L Site 1938
Homo.sapiens.CDK1 ---K---P-- G SLA--S---H Site 1937
Candida.albicans.CDK1 ---K---K-- K PLS--E---A Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---S---R-- K RWE--R---F Site 1903
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---Q---P-- V PWE--T---V Site 1940
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---I---P-- N NLK--T---L Site 1940
Saccharomyces.castelli.IME2 ---E---G-- I SLD--R---F Site 1940
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -------C-- K PLK--Q---Y Site 1940
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---P---G-- V PLQ--H---I Site 1940
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---S---S-- K SLR--Q---A Site 1940
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---K---A-- H PWS--K---V Site 1940
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - EYSVAFETFG  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---P---G-- T PLE--H---I Site 1940
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---Q---K-- R KVK--D---R Site 1940
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - --GSDM---L  
Acyrthosiphon.pisum.CDK1 ---E---A-- R LIE--E---F Site 1937
Candida.tropicalis.CDK1 ---P---G-- M NIE--D---V Site 1940
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- A KYM--E---R Site 1943
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---K---A-- H PWN--R---V Site 1940
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---S---R-- K RWE--R---F Site 1903
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---R---A-- E ALL--S---H Site 1940
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---S---R-- K PWS--K---F Site 1903
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---K---P-- Q PLI--N---H Site 1940
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---P---K-- K DLS--V---L Site 1940
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- N NLS--NWFKL Site 1914
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---S---G-- T GIE--K---L Site 1940
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---K---P-- H PWS--K---V Site 1939
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---P---H-- R DFS--T---L Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -------P-- R TLE--T---A Site 1939
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---S---R-- K RWE--R---F Site 1903
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - --GSDL---M  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---P---Y-- N NLR--K---R Site 1940
Candida.dubliniensis.IME2 ---T---G-- T TIE--E---I Site 1940
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---P---G-- I KFE--E---L Site 1940
Aspergillus.niger.IME2 ---A---P-- H SME--S---I Site 1940
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---P---K-- M NFE--D---V Site 1940
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---Q--HP-- K NAR--K---K Site 1936
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---S---S-- K NLR--Q---A Site 1940
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---S---R-- K RWE--R---F Site 1903
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -------A-- R KLH--E---I Site 1940
Schizosaccharomyces.japonicus.IME2 ---M---P-- L SFH--E---L Site 1940
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---Q---A-- T PFE--V---L Site 1940
Gallus.gallus.CDK1 ---K---P-- G SLG--T---H Site 1937
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---PA--T-- T SLV--N---V Site 1940
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---K---P-- H PFN--K---V Site 1940
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---T---G-- I SMT--S---D Site 1940
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---K---A-- H PWN--K---V Site 1940
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---E---K-- K DFA--S---I Site 1940
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---T---K-- K SWT--H---F Site 1940
Kluyveromyces.waltii.IME2 ---E---G-- T SIE--S---I Site 1940
Debaryomyces.hansenii.SKY1 ---------- - SLK--D---V  
Saccharomyces.cerevisiae.IME2 ---E---G-- S SLD--H---L Site 1940
Schizosaccharomyces.japonicus.b.IME2 ---L---P-- Y PIE--N---L Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---Q---P-- Q PIE--N---V Site 1940
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---S---R-- K RWE--N---F Site 1903
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---P---H-- K PLT--Q---L Site 1940
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---S---A-- Q PIE--K---F Site 1940
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---K---P-- I TLA--E---I Site 1940
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---Q---K-- K DFG--S---L Site 1940
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---Q--HP-- K TAR--K---K Site 1940
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---A---G-- Y SFE--K---L Site 1940
Candida.albicans.IME2 ---S---G-- M SIE--D---I Site 1940
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---T---Q-- Q PVD--K---F Site 1940
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---P---Y-- N NLK--S---K Site 1940
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---P---K-- M NFA--N---V Site 1940
Kluyveromyces.lactis.IME2 ---E---G-- K TIR--D---V Site 1940
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---Q---P-- V PWE--T---V Site 1940
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---A---G-- L TFP--K---L Site 1940
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---P---Q-- K DLS--S---I Site 1940
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---P---Q-- K DLS--S---V Site 1940
Amphimedon.queenslandica.CDK1 ---P---R-- Q NLQ--R---I Site 1937
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---ED--M-- E TLE--E---K Site 1940
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---P---R-- K EMK--D---I Site 1937
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---P---V-- S QLR--K---H Site 1940
Neurospora.crassa.IME2 ---A---P-- H SMD--T---I Site 1940
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---PA--I-- T SWS--Q---L Site 1940
Dictyostelium.discoideum.DYRK2..Probable.serine.th -------T-- K SFK--D---S Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---G---P-- R PVQ--S---V Site 1940
Hydra.magnipapillata.CDK1 ---R---P-- Q PFQ--T---F Site 1939
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---P---Y-- N NLK--H---K Site 1940
Ashbya.gossypii.IME2 ---E---G-- K DIS--W---V Site 1938
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -------S-- K DWG--T---A Site 1940
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---K---P-- I PLS--R---V Site 1940
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---P---Q-- V PLD--E---I Site 1940
Schizosaccharomyces.pombe.b.IME2 ---K---P-- Y PIQ--K---L Site 1940
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---N---K-- V PWN--R---L Site 1940
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - --GGDL---L  
Schizosaccharomyces.pombe.CDK1 ---K---R-- M DLH--K---V Site 1939
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -------C-- K PLR--R---Y Site 1940
Saccoglossus.kowalevskii.CDK1 ---P---Q-- Q DLS--K---V Site 1940
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---A---G-- Y SFE--K---L Site 1940
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---S---R-- K GLE--E---I Site 1939
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---T---R-- K GLE--E---I Site 1940
Yarrowia.lipolytica.IME2 ---T---G-- Q SSN--S---I Site 1940
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---R------ D NLA--TWYHS Site 1937
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---A---R-- Q DLS--K---V Site 1940
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - EEGTLPEYSI  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---K---P-- H PFN--K---V Site 1940
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---R---P-- Q PLS--R---V Site 1940
Species Residue at Site 3042
in 'msaprobs'
muscle

The residue for every species at site 3042 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -------A-- R KLH--E---I Site 1940
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---Q---PSL P VLY--T---L Site 1941
Scheffersomyces.stipitis.SKY1 ---------- - GLK--E---V  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---PA--T-- T SLV--N---V Site 1940

Generated by PhyloBot at 02:13, June 4th 2020
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