cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 3039 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3039 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3039 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3039 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ------A--- P --LNLR--E- Site 1939
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ---PLF--S-  
Danio.rerio.CDK1 ------A--- R --QDLS--K- Site 1939
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ------R--- R --QSFQ--E- Site 1939
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ------PA-- T --MSLV--N- Site 1939
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ------PA-- E --TNWS--E- Site 1939
Candida.guilliermondii.IME2 ------T--- G --IPID--E- Site 1939
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ------E--- G --SGVA--K- Site 1939
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ------R--- P --HTLE--S- Site 1939
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - --IKYM--E-  
Schizosaccharomyces.octosporus.b.IME2 ------R--- P --YPLR--K- Site 1939
Candida.albicans.MAPK3..Extracellular.signal.regul ------K--- K --IPFS--E- Site 1939
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ------S--- R --KPWS--K- Site 1879
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ------A--- G --KSWK--D- Site 1939
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- C --KPLK--S- Site 1939
Aedes.aegypti.CDK1 ------T--- Q --NNLT--S- Site 1936
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- C --KPLK--E- Site 1939
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- C --KPLR--R- Site 1939
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- S --KDLT--M- Site 1939
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - -----GTDM-  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ------ES-- M --EPLE--M- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ------K--- A --IPLG--E- Site 1939
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ------S--- R --KRWE--N- Site 1902
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ------P--- N --VPWA--K- Site 1939
Strongylocentrotus.purpuratus.CDK1 ------T--- P --QDFT--K- Site 1938
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ------S--- T --NQLT--N- Site 1936
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ---PLD--R-  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ------L--- P --QPLI--N- Site 1939
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ------S--- - ---SLS--E-  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ------A--- G --LTFP--K- Site 1939
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ------KE-- R --EPLE--R- Site 1939
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ------A--- G --LTFP--K- Site 1939
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ------P--- R --KDFT--Q- Site 1939
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ------Q--- P SLPVLY--T- Site 1938
Bombus.terrestris.CDK1 ------E--- P --RPLD--E- Site 1938
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ---GLF--E-  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ------KE-- A --ESLD--R- Site 1939
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ------A--- G --YSFE--K- Site 1939
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ------Y--- R --RRLR--E- Site 1939
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ------K--- G --SGIP--L- Site 1937
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ------K--- A --TPWE--N- Site 1939
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ------K--- G --IPWS--S- Site 1939
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO KYIFNCLDDI G QVNVPTDLEG Site 1987
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ------S--- R --KPWS--K- Site 1902
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ------Q--- P SLPVLY--T- Site 1938
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ------ED-- M --EPLE--L- Site 1939
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- - -----GSDL-  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ------P--- Y --NNLR--K- Site 1939
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ------S--H P --QTLD--R- Site 1933
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- C --KPLR--R- Site 1939
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ------P--- Y --NNLR--K- Site 1939
Naegleria.gruberi.LF4 ------A--- G --KGLK--A- Site 1939
Saccharomyces.bayanus.IME2 ------E--- G --SSLD--H- Site 1939
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ------S--- R --KRWE--N- Site 1902
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ------R--- K --KDLR--I- Site 1939
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ------P--- A --TPFK--Q- Site 1939
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- K --KKLS--E- Site 1939
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- T --RRLQ--E- Site 1987
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- S --REWG--N- Site 1939
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ------N--H P --QSLE--R- Site 1933
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ------P--- Q --QTLD--A- Site 1939
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- S --KDLT--M- Site 1939
Aspergillus.nidulans.IME2 ------A--- P --HSME--S- Site 1939
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ---PAASKNT  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ------A--- P DTQRLY--K- Site 1940
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ------I--- P --INLK--T- Site 1938
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ------A--- R --QDFS--K- Site 1939
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ------A--- G --LTFP--K- Site 1939
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ------K--- A --HPWH--K- Site 1939
Penicillium.marneffei.IME2 ------A--- P --HSMS--S- Site 1938
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ------P--- K --RNFA--D- Site 1939
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ------V--- K --RPLR--K- Site 1939
Drosophila.melanogaster.MAK ------I--- K --VPLS--S- Site 1939
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- K --PVKF--S- Site 1910
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- T --VMST--I- Site 1906
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ------Y--- R --RRLR--E- Site 1939
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - --NSLA--K-  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ------P--- Y --NNLK--H- Site 1939
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ------A--- G --LTFP--K- Site 1939
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ------P--- G --IKFE--E- Site 1939
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- C --KPLK--E- Site 1993
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ---AISEKTD  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ------R--- G --LTRT--Q- Site 1939
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ------N--- - --NLLP--QW  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ------K--- A --HPWT--K- Site 1939
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ------P--- G --IKFE--E- Site 1939
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ------S--- R --KRWE--R- Site 1902
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- C --KPLK--E- Site 1936
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ------V--- K --RPLR--K- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ------R--- A --EALL--S- Site 1939
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ------S--- R --KRWE--R- Site 1902
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ------P--- - --PNLE--AW  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ------P--- K --KEFS--L- Site 1939
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- T --RRLQ--E- Site 1987
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ------S--- R --KRWE--R- Site 1902
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ------K--- A --CQWR--K- Site 1939
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ------K--- A --NPWP--R- Site 1939
Candida.orthopsilosis.IME2 ------R--- G --FTRA--Q- Site 1939
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ------P--- G --TPLE--H- Site 1939
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ------Q--- P --VPFE--T- Site 1939
Debaryomyces.hansenii.IME2 ------D--- G --VQIC--N- Site 1939
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ------K--- A --HPWT--K- Site 1939
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ------R--- - --DNLS--VW  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ------S--- - --FNLN--K-  
Caenorhabditis.briggsae.CDK1 ------R--- E --NFLR--D- Site 1938
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ------S--- R --KRWE--R- Site 1902
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ------A--- P --VPLE--E- Site 1939
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- S --KDWA--T- Site 1939
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ------P--- A --QPIE--K- Site 1939
Monosiga.brevicollis.CDK1 ------K--- K --GCLN--D- Site 1936
Saccharomyces.cerevisiae.SKY1 ---------- - ---PLE--D-  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ------P--- G --VDFK--T- Site 1939
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ------HA-- V --EPLE--K- Site 1939
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ------K--- S --HPWQ--K- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ------P--- R --QTLD--A- Site 1939
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ------KDAE A --EPLE--S- Site 1939
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ------P--- Y --NNLR--E- Site 1939
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ------N--H P --QSLE--R- Site 1933
Ajellomyces.capsulatus.CDK1 ------K--- R --EDTR--K- Site 1936
Dictystelium.discoideum.MAPK3..Extracellular.signa ------P--- K --VNFA--N- Site 1939
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ------S--- A --QPIE--K- Site 1939
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ------P--- Y --NNLK--H- Site 1939
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ------A--- G --YSFE--K- Site 1939
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ------P--- K --KDFT--Q- Site 1939
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ------H--- P --KRPK--D- Site 1911
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ------P--- P SLSVLY--M- Site 1938
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ------A--- G --LTFP--K- Site 1939
Saccharomyces.cerevisiae.CDK1 ------R--- R --KDLS--Q- Site 1939
Lodderomyces.elongisporus.IME2 ------P--- G --TNIH--E- Site 1939
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ------P--- K --RNFA--D- Site 1939
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- C --KPLR--R- Site 1939
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ------N--H P --QSLE--R- Site 1933
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ------R--- P --IPLN--R- Site 1939
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ------R--- R --YSLD--E- Site 1939
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- C --KPLK--E- Site 1939
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - -----GSDM-  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ------ED-- M --ETLE--L- Site 1939
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ------K--- A --HPWT--K- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ------R--- E --NFLR--D- Site 1938
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ------G--- P --RPVQ--S- Site 1939
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - --SNPL--AP  
Salmo.salar.CDK1 ------A--- R --QELS--K- Site 1939
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ------P--- G --TPLH--L- Site 1939
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ------V--- P --MPLE--E- Site 1939
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ------K--- A --HPWT--K- Site 1939
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ------R--- R --FVLVTEL- Site 1933
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - --IKYM--E-  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- C --KPLR--Q- Site 1939
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ------P--- K --KDLS--V- Site 1939
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ------A--- P NLQSLY--R- Site 1940
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - -----GSDM-  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ------T--- K --VAWA--K- Site 1939
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ------K--- P --QPLI--N- Site 1939
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ------P--- Y --NNLK--H- Site 1939
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ------QE-- M --EPLE--L- Site 1939
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ------T--- G --YSFD--R- Site 1939
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ------E--- K --RRIS--T- Site 1939
Candida.glabrata.IME2 ------E--- G --SSLE--K- Site 1939
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ------V--- P --INLK--T- Site 1939
Schizosaccharomyces.pombe.IME2 ------A--- P --LDFG--D- Site 1939
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ------K--- K --IPFQ--D- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ------PA-- I --TSWS--Q- Site 1939
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - -----DREA-  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ------L--- P --QPLL--S- Site 1939
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ------ED-- M --ETLE--E- Site 1939
Branchiostoma.floridae.CDK1 ------P--- R --QDVT--K- Site 1938
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- C --KPLR--R- Site 1939
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ------R--- P --QPLS--R- Site 1939
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ------QT-- - ---MLE--D-  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ------K--- A --HPWN--K- Site 1939
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ------V--- P --NNLK--T- Site 1939
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- C --KPLK--S- Site 1939
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- T --RKLH--N- Site 1987
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ------A--- R --QDFS--K- Site 1939
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ------Q--- P --VPWE--T- Site 1939
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ------P--- K --MNFA--N- Site 1939
Lachancea.thermotolerans.SKY1 ---------- - ---PLK--D-  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ------P--- H --RPLT--Q- Site 1939
Dictyostelium.discoideum.CDK1 ------P--- G --QPYN--K- Site 1938
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ------E--- K --KDFA--S- Site 1939
Xenopus.tropicalis.IME2 ------V--- R --QDFS--K- Site 1939
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- - -----GTDM-  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ------S--- R --KRWE--R- Site 1902
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ------I--- R --QDFS--K- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ------A--- R --KEMK--E- Site 1938
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ------K--- P --QSLQ--I- Site 1939
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ------N--- P --RSLS--D- Site 1939
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- T --RKLH--N- Site 1987
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ------K--- A --HPWT--K- Site 1939
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ------K--- P --HPWS--K- Site 1939
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ------P--- Y --NNLK--S- Site 1939
Encephalitozoon.cuniculi.CDK1 ------D--- P --VDLK--T- Site 1939
Saccharomyces.kluyveri.IME2 ------E--- G --VNIE--V- Site 1939
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- C --KPLK--E- Site 1939
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ------N--- K --VPWN--R- Site 1939
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ------T--- P --RSLH--V- Site 1939
Cryptococcus.neoformans.IME2 ------K--- P --VRFR--S- Site 1939
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - -----DREA-  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ---GLL--E-  
Candida.lusitaniae.IME2 ------I--- G --NSIH--H- Site 1939
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - -----GTDM-  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - --VKYM--E-  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ------P--- P --IPLE--E- Site 1939
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ------DG-- T --EPLD--M- Site 1939
Gallus.gallus.CDK2 ------A--- R --QDLG--K- Site 1939
Emericella.nidulans.CDK1 ------K--- R --EDIQ--N- Site 1939
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ------K--- G --SGIP--L- Site 1937
Homo.sapiens.CDK1 ------K--- P --GSLA--S- Site 1936
Candida.albicans.CDK1 ------K--- K --KPLS--E- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ------S--- R --KRWE--R- Site 1902
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ------Q--- P --VPWE--T- Site 1939
Mus.musculus.ICK..Serine.threonine.protein.kinase. ------I--- P --NNLK--T- Site 1939
Saccharomyces.castelli.IME2 ------E--- G --ISLD--R- Site 1939
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- C --KPLK--Q- Site 1939
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ------P--- G --VPLQ--H- Site 1939
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ------S--- S --KSLR--Q- Site 1939
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ------K--- A --HPWS--K- Site 1939
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ---EYSVAFE  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ------P--- G --TPLE--H- Site 1939
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ------Q--- K --RKVK--D- Site 1939
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - -----GSDM-  
Acyrthosiphon.pisum.CDK1 ------E--- A --RLIE--E- Site 1936
Candida.tropicalis.CDK1 ------P--- G --MNIE--D- Site 1939
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - --AKYM--E-  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ------K--- A --HPWN--R- Site 1939
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ------S--- R --KRWE--R- Site 1902
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ------R--- A --EALL--S- Site 1939
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ------S--- R --KPWS--K- Site 1902
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ------K--- P --QPLI--N- Site 1939
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ------P--- K --KDLS--V- Site 1939
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - --NNLS--NW  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ------S--- G --TGIE--K- Site 1939
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ------K--- P --HPWS--K- Site 1938
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ------P--- H --RDFS--T- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- P --RTLE--T- Site 1938
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ------S--- R --KRWE--R- Site 1902
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - -----GSDL-  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ------P--- Y --NNLR--K- Site 1939
Candida.dubliniensis.IME2 ------T--- G --TTIE--E- Site 1939
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ------P--- G --IKFE--E- Site 1939
Aspergillus.niger.IME2 ------A--- P --HSME--S- Site 1939
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ------P--- K --MNFE--D- Site 1939
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ------Q--H P --KNAR--K- Site 1933
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ------S--- S --KNLR--Q- Site 1939
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ------S--- R --KRWE--R- Site 1902
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- A --RKLH--E- Site 1939
Schizosaccharomyces.japonicus.IME2 ------M--- P --LSFH--E- Site 1939
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ------Q--- A --TPFE--V- Site 1939
Gallus.gallus.CDK1 ------K--- P --GSLG--T- Site 1936
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ------PA-- T --TSLV--N- Site 1939
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ------K--- P --HPFN--K- Site 1939
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ------T--- G --ISMT--S- Site 1939
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ------K--- A --HPWN--K- Site 1939
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ------E--- K --KDFA--S- Site 1939
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ------T--- K --KSWT--H- Site 1939
Kluyveromyces.waltii.IME2 ------E--- G --TSIE--S- Site 1939
Debaryomyces.hansenii.SKY1 ---------- - ---SLK--D-  
Saccharomyces.cerevisiae.IME2 ------E--- G --SSLD--H- Site 1939
Schizosaccharomyces.japonicus.b.IME2 ------L--- P --YPIE--N- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ------Q--- P --QPIE--N- Site 1939
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ------S--- R --KRWE--N- Site 1902
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ------P--- H --KPLT--Q- Site 1939
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ------S--- A --QPIE--K- Site 1939
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ------K--- P --ITLA--E- Site 1939
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ------Q--- K --KDFG--S- Site 1939
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ------Q--H P --KTAR--K- Site 1939
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ------A--- G --YSFE--K- Site 1939
Candida.albicans.IME2 ------S--- G --MSIE--D- Site 1939
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ------T--- Q --QPVD--K- Site 1939
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ------P--- Y --NNLK--S- Site 1939
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ------P--- K --MNFA--N- Site 1939
Kluyveromyces.lactis.IME2 ------E--- G --KTIR--D- Site 1939
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ------Q--- P --VPWE--T- Site 1939
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ------A--- G --LTFP--K- Site 1939
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ------P--- Q --KDLS--S- Site 1939
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ------P--- Q --KDLS--S- Site 1939
Amphimedon.queenslandica.CDK1 ------P--- R --QNLQ--R- Site 1936
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ------ED-- M --ETLE--E- Site 1939
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ------P--- R --KEMK--D- Site 1936
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ------P--- V --SQLR--K- Site 1939
Neurospora.crassa.IME2 ------A--- P --HSMD--T- Site 1939
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ------PA-- I --TSWS--Q- Site 1939
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- T --KSFK--D- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ------G--- P --RPVQ--S- Site 1939
Hydra.magnipapillata.CDK1 ------R--- P --QPFQ--T- Site 1938
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ------P--- Y --NNLK--H- Site 1939
Ashbya.gossypii.IME2 ------E--- G --KDIS--W- Site 1937
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- S --KDWG--T- Site 1939
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ------K--- P --IPLS--R- Site 1939
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ------P--- Q --VPLD--E- Site 1939
Schizosaccharomyces.pombe.b.IME2 ------K--- P --YPIQ--K- Site 1939
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ------N--- K --VPWN--R- Site 1939
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - -----GGDL-  
Schizosaccharomyces.pombe.CDK1 ------K--- R --MDLH--K- Site 1938
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- C --KPLR--R- Site 1939
Saccoglossus.kowalevskii.CDK1 ------P--- Q --QDLS--K- Site 1939
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ------A--- G --YSFE--K- Site 1939
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ------S--- R --KGLE--E- Site 1938
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ------T--- R --KGLE--E- Site 1939
Yarrowia.lipolytica.IME2 ------T--- G --QSSN--S- Site 1939
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ------R--- - --DNLA--TW  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ------A--- R --QDLS--K- Site 1939
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ---EEGTLPE  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ------K--- P --HPFN--K- Site 1939
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ------R--- P --QPLS--R- Site 1939
Species Residue at Site 3039
in 'msaprobs'
muscle

The residue for every species at site 3039 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- A --RKLH--E- Site 1939
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ------Q--- P SLPVLY--T- Site 1938
Scheffersomyces.stipitis.SKY1 ---------- - ---GLK--E-  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ------PA-- T --TSLV--N- Site 1939

Generated by PhyloBot at 02:56, October 16th 2019
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