cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 3035 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 3035 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 3035 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 3035 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- A ---P--LNLR Site 1938
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - -------PLF  
Danio.rerio.CDK1 ---------- A ---R--QDLS Site 1938
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- R ---R--QSFQ Site 1938
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- P A--T--MSLV Site 1933
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- P A--E--TNWS Site 1933
Candida.guilliermondii.IME2 ---------- T ---G--IPID Site 1938
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- E ---G--SGVA Site 1938
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- R ---P--HTLE Site 1938
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ------IKYM  
Schizosaccharomyces.octosporus.b.IME2 ---------- R ---P--YPLR Site 1938
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- K ---K--IPFS Site 1938
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- S ---R--KPWS Site 1878
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- A ---G--KSWK Site 1938
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ---C--KPLK  
Aedes.aegypti.CDK1 ---------- T ---Q--NNLT Site 1933
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ---C--KPLK  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ---C--KPLR  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ---S--KDLT  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - ---------G  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- E S--M--EPLE Site 1936
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- K ---A--IPLG Site 1938
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- S ---R--KRWE Site 1901
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- P ---N--VPWA Site 1938
Strongylocentrotus.purpuratus.CDK1 ---------- T ---P--QDFT Site 1933
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- S ---T--NQLT Site 1933
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - -------PLD  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- L ---P--QPLI Site 1938
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- S -------SLS Site 1936
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- A ---G--LTFP Site 1938
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- K E--R--EPLE Site 1933
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- A ---G--LTFP Site 1938
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- P ---R--KDFT Site 1938
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- Q ---PSLPVLY Site 1937
Bombus.terrestris.CDK1 ---------- E ---P--RPLD Site 1933
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - -------GLF  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- K E--A--ESLD Site 1933
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- A ---G--YSFE Site 1938
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- Y ---R--RRLR Site 1938
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- K ---G--SGIP Site 1936
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- K ---A--TPWE Site 1938
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- K ---G--IPWS Site 1938
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO KEARKYIFNC L DDIGQVNVPT Site 1983
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- S ---R--KPWS Site 1901
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- Q ---PSLPVLY Site 1937
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- E D--M--EPLE Site 1937
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------- - ---------G  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- P ---Y--NNLR Site 1938
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- S --HP--QTLD Site 1914
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ---C--KPLR  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- P ---Y--NNLR Site 1938
Naegleria.gruberi.LF4 ---------- A ---G--KGLK Site 1938
Saccharomyces.bayanus.IME2 ---------- E ---G--SSLD Site 1938
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- S ---R--KRWE Site 1901
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- R ---K--KDLR Site 1938
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- P ---A--TPFK Site 1938
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ---K--KKLS  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ---T--RRLQ  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ---S--REWG  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- N --HP--QSLE Site 1914
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- P ---Q--QTLD Site 1938
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ---S--KDLT  
Aspergillus.nidulans.IME2 ---------- A ---P--HSME Site 1938
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - -------PAA  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- A ---PDTQRLY Site 1939
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- I ---P--INLK Site 1933
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- A ---R--QDFS Site 1938
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- A ---G--LTFP Site 1938
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- K ---A--HPWH Site 1938
Penicillium.marneffei.IME2 ---------- A ---P--HSMS Site 1933
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- P ---K--RNFA Site 1938
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- V ---K--RPLR Site 1938
Drosophila.melanogaster.MAK ---------- I ---K--VPLS Site 1938
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ---K--PVKF  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ---T--VMST  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- Y ---R--RRLR Site 1938
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ------NSLA  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- P ---Y--NNLK Site 1938
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- A ---G--LTFP Site 1938
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- P ---G--IKFE Site 1938
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ---C--KPLK  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - -------AIS  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- R ---G--LTRT Site 1938
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- N ------NLLP Site 1943
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- K ---A--HPWT Site 1938
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- P ---G--IKFE Site 1938
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- S ---R--KRWE Site 1901
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ---C--KPLK  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- V ---K--RPLR Site 1938
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- R ---A--EALL Site 1938
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- S ---R--KRWE Site 1901
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- P ------PNLE Site 1932
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- P ---K--KEFS Site 1938
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ---T--RRLQ  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- S ---R--KRWE Site 1901
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- K ---A--CQWR Site 1938
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- K ---A--NPWP Site 1938
Candida.orthopsilosis.IME2 ---------- R ---G--FTRA Site 1938
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- P ---G--TPLE Site 1938
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- Q ---P--VPFE Site 1938
Debaryomyces.hansenii.IME2 ---------- D ---G--VQIC Site 1938
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- K ---A--HPWT Site 1938
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- R ------DNLS Site 1936
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- S ------FNLN Site 1933
Caenorhabditis.briggsae.CDK1 ---------- R ---E--NFLR Site 1933
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- S ---R--KRWE Site 1901
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- A ---P--VPLE Site 1938
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ---S--KDWA  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- P ---A--QPIE Site 1938
Monosiga.brevicollis.CDK1 ---------- K ---K--GCLN Site 1933
Saccharomyces.cerevisiae.SKY1 ---------- - -------PLE  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- P ---G--VDFK Site 1938
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- H A--V--EPLE Site 1933
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- K ---S--HPWQ Site 1938
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- P ---R--QTLD Site 1938
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- K DAEA--EPLE Site 1933
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- P ---Y--NNLR Site 1938
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- N --HP--QSLE Site 1914
Ajellomyces.capsulatus.CDK1 ---------- K ---R--EDTR Site 1933
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- P ---K--VNFA Site 1938
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- S ---A--QPIE Site 1938
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- P ---Y--NNLK Site 1938
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- A ---G--YSFE Site 1938
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- P ---K--KDFT Site 1938
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- H ---P--KRPK Site 1908
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- P ---PSLSVLY Site 1936
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- A ---G--LTFP Site 1938
Saccharomyces.cerevisiae.CDK1 ---------- R ---R--KDLS Site 1938
Lodderomyces.elongisporus.IME2 ---------- P ---G--TNIH Site 1938
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- P ---K--RNFA Site 1938
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ---C--KPLR  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- N --HP--QSLE Site 1914
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- R ---P--IPLN Site 1938
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- R ---R--YSLD Site 1938
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ---C--KPLK  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - ---------G  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- E D--M--ETLE Site 1936
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- K ---A--HPWT Site 1938
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- R ---E--NFLR Site 1933
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- G ---P--RPVQ Site 1938
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ------SNPL  
Salmo.salar.CDK1 ---------- A ---R--QELS Site 1938
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- P ---G--TPLH Site 1938
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- V ---P--MPLE Site 1938
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- K ---A--HPWT Site 1938
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- R ---R--FVLV Site 1932
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ------IKYM  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ---C--KPLR  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- P ---K--KDLS Site 1938
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- A ---PNLQSLY Site 1939
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - ---------G  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- T ---K--VAWA Site 1938
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- K ---P--QPLI Site 1938
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- P ---Y--NNLK Site 1938
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- Q E--M--EPLE Site 1937
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- T ---G--YSFD Site 1938
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- E ---K--RRIS Site 1938
Candida.glabrata.IME2 ---------- E ---G--SSLE Site 1938
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- V ---P--INLK Site 1938
Schizosaccharomyces.pombe.IME2 ---------- A ---P--LDFG Site 1938
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- K ---K--IPFQ Site 1938
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- P A--I--TSWS Site 1933
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ---------D  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- L ---P--QPLL Site 1938
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- E D--M--ETLE Site 1937
Branchiostoma.floridae.CDK1 ---------- P ---R--QDVT Site 1933
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ---C--KPLR  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- R ---P--QPLS Site 1938
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- Q T------MLE Site 1936
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- K ---A--HPWN Site 1938
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- V ---P--NNLK Site 1938
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ---C--KPLK  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ---T--RKLH  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- A ---R--QDFS Site 1938
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- Q ---P--VPWE Site 1938
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- P ---K--MNFA Site 1938
Lachancea.thermotolerans.SKY1 ---------- - -------PLK  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- P ---H--RPLT Site 1938
Dictyostelium.discoideum.CDK1 ---------- P ---G--QPYN Site 1933
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- E ---K--KDFA Site 1938
Xenopus.tropicalis.IME2 ---------- V ---R--QDFS Site 1938
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- - ---------G  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- S ---R--KRWE Site 1901
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- I ---R--QDFS Site 1938
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- A ---R--KEMK Site 1933
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- K ---P--QSLQ Site 1938
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- N ---P--RSLS Site 1938
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ---T--RKLH  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- K ---A--HPWT Site 1938
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- K ---P--HPWS Site 1938
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- P ---Y--NNLK Site 1938
Encephalitozoon.cuniculi.CDK1 ---------- D ---P--VDLK Site 1938
Saccharomyces.kluyveri.IME2 ---------- E ---G--VNIE Site 1938
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ---C--KPLK  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- N ---K--VPWN Site 1938
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- T ---P--RSLH Site 1938
Cryptococcus.neoformans.IME2 ---------- K ---P--VRFR Site 1938
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ---------D  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - -------GLL  
Candida.lusitaniae.IME2 ---------- I ---G--NSIH Site 1938
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - ---------G  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - ------VKYM  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- P ---P--IPLE Site 1938
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- D G--T--EPLD Site 1937
Gallus.gallus.CDK2 ---------- A ---R--QDLG Site 1938
Emericella.nidulans.CDK1 ---------- K ---R--EDIQ Site 1938
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- K ---G--SGIP Site 1936
Homo.sapiens.CDK1 ---------- K ---P--GSLA Site 1933
Candida.albicans.CDK1 ---------- K ---K--KPLS Site 1933
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- S ---R--KRWE Site 1901
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- Q ---P--VPWE Site 1938
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- I ---P--NNLK Site 1938
Saccharomyces.castelli.IME2 ---------- E ---G--ISLD Site 1938
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ---C--KPLK  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- P ---G--VPLQ Site 1938
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- S ---S--KSLR Site 1938
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- K ---A--HPWS Site 1938
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - -------EYS  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- P ---G--TPLE Site 1938
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- Q ---K--RKVK Site 1938
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - ---------G  
Acyrthosiphon.pisum.CDK1 ---------- E ---A--RLIE Site 1933
Candida.tropicalis.CDK1 ---------- P ---G--MNIE Site 1938
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ------AKYM  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- K ---A--HPWN Site 1938
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- S ---R--KRWE Site 1901
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- R ---A--EALL Site 1938
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- S ---R--KPWS Site 1901
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- K ---P--QPLI Site 1938
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- P ---K--KDLS Site 1938
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - ------NNLS  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- S ---G--TGIE Site 1938
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- K ---P--HPWS Site 1933
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- P ---H--RDFS Site 1938
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - ---P--RTLE  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- S ---R--KRWE Site 1901
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------- - ---------G  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- P ---Y--NNLR Site 1938
Candida.dubliniensis.IME2 ---------- T ---G--TTIE Site 1938
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- P ---G--IKFE Site 1938
Aspergillus.niger.IME2 ---------- A ---P--HSME Site 1938
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- P ---K--MNFE Site 1938
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- Q --HP--KNAR Site 1914
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- S ---S--KNLR Site 1938
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- S ---R--KRWE Site 1901
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ---A--RKLH  
Schizosaccharomyces.japonicus.IME2 ---------- M ---P--LSFH Site 1938
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- Q ---A--TPFE Site 1938
Gallus.gallus.CDK1 ---------- K ---P--GSLG Site 1933
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- P A--T--TSLV Site 1937
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- K ---P--HPFN Site 1938
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- T ---G--ISMT Site 1938
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- K ---A--HPWN Site 1938
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- E ---K--KDFA Site 1938
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- T ---K--KSWT Site 1938
Kluyveromyces.waltii.IME2 ---------- E ---G--TSIE Site 1938
Debaryomyces.hansenii.SKY1 ---------- - -------SLK  
Saccharomyces.cerevisiae.IME2 ---------- E ---G--SSLD Site 1938
Schizosaccharomyces.japonicus.b.IME2 ---------- L ---P--YPIE Site 1938
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- Q ---P--QPIE Site 1938
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- S ---R--KRWE Site 1901
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- P ---H--KPLT Site 1938
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- S ---A--QPIE Site 1938
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- K ---P--ITLA Site 1938
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- Q ---K--KDFG Site 1938
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- Q --HP--KTAR Site 1937
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- A ---G--YSFE Site 1938
Candida.albicans.IME2 ---------- S ---G--MSIE Site 1938
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- T ---Q--QPVD Site 1938
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- P ---Y--NNLK Site 1938
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- P ---K--MNFA Site 1938
Kluyveromyces.lactis.IME2 ---------- E ---G--KTIR Site 1938
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- Q ---P--VPWE Site 1938
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- A ---G--LTFP Site 1938
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- P ---Q--KDLS Site 1938
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- P ---Q--KDLS Site 1938
Amphimedon.queenslandica.CDK1 ---------- P ---R--QNLQ Site 1933
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- E D--M--ETLE Site 1936
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- P ---R--KEMK Site 1933
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- P ---V--SQLR Site 1938
Neurospora.crassa.IME2 ---------- A ---P--HSMD Site 1938
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- P A--I--TSWS Site 1911
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ---T--KSFK  
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- G ---P--RPVQ Site 1938
Hydra.magnipapillata.CDK1 ---------- R ---P--QPFQ Site 1933
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- P ---Y--NNLK Site 1938
Ashbya.gossypii.IME2 ---------- E ---G--KDIS Site 1936
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ---S--KDWG  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- K ---P--IPLS Site 1938
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- P ---Q--VPLD Site 1938
Schizosaccharomyces.pombe.b.IME2 ---------- K ---P--YPIQ Site 1938
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- N ---K--VPWN Site 1938
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---------- - ---------G  
Schizosaccharomyces.pombe.CDK1 ---------- K ---R--MDLH Site 1933
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ---C--KPLR  
Saccoglossus.kowalevskii.CDK1 ---------- P ---Q--QDLS Site 1933
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- A ---G--YSFE Site 1938
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- S ---R--KGLE Site 1933
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- T ---R--KGLE Site 1938
Yarrowia.lipolytica.IME2 ---------- T ---G--QSSN Site 1938
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- R ------DNLA Site 1936
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- A ---R--QDLS Site 1938
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - -------EEG  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- K ---P--HPFN Site 1938
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- R ---P--QPLS Site 1938
Species Residue at Site 3035
in 'msaprobs'
muscle

The residue for every species at site 3035 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ---A--RKLH  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- Q ---PSLPVLY Site 1937
Scheffersomyces.stipitis.SKY1 ---------- - -------GLK  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- P A--T--TSLV Site 1937

Generated by PhyloBot at 16:08, October 23rd 2019
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