cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2937 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2937 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2937 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2937 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 KQA-EK-L-- T KD----L--- Site 1879
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -GG-DE-S-- R VY----F--- Site 1879
Danio.rerio.CDK1 -GV-TS-M-- P DY----K--- Site 1880
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -FL-NE--NA K RY----I--- Site 1880
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -AM-TK-L-- P DY----K--- Site 1880
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -TM-RR-L-- P DY----R--- Site 1880
Candida.guilliermondii.IME2 VEG-QL-L-- A GK----C--- Site 1879
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 -KM-KK-R-- S AH----M--- Site 1879
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -VM-N----- P NY----V--- Site 1877
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -DI-KK-M-- P EH----S--- Site 1880
Schizosaccharomyces.octosporus.b.IME2 PTA-KE-L-- A VK----L--- Site 1879
Candida.albicans.MAPK3..Extracellular.signal.regul -NI-KS-KRA R EY----I--- Site 1880
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -NK-YQLELD T Q--------- Site 1866
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. -QL-SS--SV R LY----C--- Site 1880
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -RT-RK-Q-- K YF----Y--- Site 1879
Aedes.aegypti.CDK1 -GV-TS-L-- P DY----K--- Site 1880
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -KT-RK-R-- R YF----H--- Site 1879
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -KT-RK-Q-- K YF----Y--- Site 1879
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -TA-SR-R-- Q TF----F--- Site 1879
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -AG-TK-T-- T RF----F--- Site 1879
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -VF-ST-N-- Q FF----S--- Site 1892
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -NV-ES-L-- P NY----Q--- Site 1880
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -KK-YHIDLD P H--------- Site 1880
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -CI-IN-EKA R NY----L--- Site 1880
Strongylocentrotus.purpuratus.CDK1 -GV-TS-L-- P DY----K--- Site 1880
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 -GV-TS-L-- P DY----K--- Site 1880
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -GG-AK-S-- K DY----F--- Site 1880
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -GV-TA-F-- S EF----R--- Site 1877
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -GV-SK-Y-- P QY----K--- Site 1880
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -KL-QP--TV R NY----V--- Site 1880
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -LF-NK-N-- P VF----A--- Site 1880
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -KL-QP--TV R NY----V--- Site 1880
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -KL-ND-KAA K SY----I--- Site 1880
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -TA-CE-G-- A KA----H--- Site 1875
Bombus.terrestris.CDK1 -GV-SQ-L-- R DY----T--- Site 1880
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -AG-KY-S-- K EF----F--- Site 1880
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -LF-CK-N-- P LF----A--- Site 1880
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -KL-QP--TV R TY----V--- Site 1880
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -DV-IK-L-- P YF----N--- Site 1880
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -KF-KQ-S-- - RA----M---  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -KL-N----- G SS-------- Site 1876
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -KL-N----- P SH----T--- Site 1877
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -SA-SK-T-- S KF----F--- Site 1878
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -NK-YQLELD P Q--------- Site 1880
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -TA-CE-G-- A KA----H--- Site 1875
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -VF-ST-N-- Q YF----S--- Site 1892
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -VG-TK-S-- T RF----F--- Site 1879
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -GY-SE-L-- P VV----K--- Site 1877
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -LF-YS-N-- P RF----A--- Site 1880
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -KT-RK-Q-- K YF----Y--- Site 1879
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -GY-SE-L-- P AV----K--- Site 1880
Naegleria.gruberi.LF4 -KF-RK-H-A S RY----L--- Site 1880
Saccharomyces.bayanus.IME2 DDA-SK-L-- V HK----L--- Site 1879
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -KK-YHIDLD P H--------- Site 1880
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -KL-QS-EDA R NY----V--- Site 1891
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -GV-TC-L-- P NY----I--- Site 1880
Dictyostelium.discoideum.DYRK1..Probable.serine.th -SS-PK-A-- K KF----F--- Site 1879
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -QA-PK-A-- R KY----F--- Site 1880
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -AS-KR-A-- K NF----V--- Site 1880
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -LF-YS-N-- P RF----H--- Site 1880
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -DL-GS---- - DYSALIL---  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -TA-SR-R-- Q VF----F--- Site 1877
Aspergillus.nidulans.IME2 KDG-SR-L-- A QK----L--- Site 1879
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -KE------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -YA-CE-G-- A KN----H--- Site 1879
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -EG-YQ-L-- A SS----M--- Site 1879
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -GV-TS-M-- P DY----K--- Site 1880
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -KL-QP--TV R NY----V--- Site 1880
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -CM-N----- P NY----T--- Site 1877
Penicillium.marneffei.IME2 REG-TK-L-- A QK----L--- Site 1879
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -RM-PS-HEA R NY----I--- Site 1880
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -ELLRV-M-- P SF----V--- Site 1880
Drosophila.melanogaster.MAK -DG-YR-L-- A SM----I--- Site 1879
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -RS-QF-L-- N DH----F--- Site 1875
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -KG-VF-K-- D QH----F--- Site 1870
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -DV-IK-L-- P YF----N--- Site 1880
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -DI-KH-L-- P EW----K--- Site 1880
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -GF-SK-L-- P LA----G--- Site 1877
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -KL-QP--TV R NY----V--- Site 1880
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -KL-QP--TV R NY----V--- Site 1880
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -KT-RK-R-- K YF----H--- Site 1892
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -EV------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 PQA-AT-L-- S HA----L--- Site 1880
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -GL-KN-Y-- P EY----Y--- Site 1880
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -EM-N----- P NY----T--- Site 1877
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -KL-QP--TV R NY----V--- Site 1880
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -DK-YNIELD P R--------- Site 1880
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -KS-RY-R-- S FK----T--- Site 1880
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -ELLRV-M-- P SF----V--- Site 1880
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -GI-LS-N-- E EF----R--- Site 1877
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -DK-YNIELD P R--------- Site 1880
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -SL-SK-F-- P EY----E--- Site 1880
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -KL-ED-MAA K KY----I--- Site 1880
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -QA-PK-A-- R KY----F--- Site 1880
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -AR-YHIDLD P R--------- Site 1880
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -AM-N----- S NY----T--- Site 1877
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -AM-N----- P YY----T--- Site 1877
Candida.orthopsilosis.IME2 PQA-AI-L-- S HA----L--- Site 1878
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -GM-SS-L-- P DY----V--- Site 1880
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -RL-QT--TV R NY----V--- Site 1880
Debaryomyces.hansenii.IME2 KEA-QL-L-- S SR----M--- Site 1879
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -SM-N----- P NY----T--- Site 1877
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -NI-HK-Y-- P EY----E--- Site 1880
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -GV-AE-Y-- P HF----K--- Site 1880
Caenorhabditis.briggsae.CDK1 -GV-ES-L-- P DY----K--- Site 1880
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -DK-YNIDLD P R--------- Site 1880
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -EI-TE-L-- P DY----N--- Site 1880
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -QS-KR-A-- K YF----I--- Site 1880
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -ND-VA-L-- P R--------- Site 1878
Monosiga.brevicollis.CDK1 -GV-TQ-L-- K DY----K--- Site 1880
Saccharomyces.cerevisiae.SKY1 -NG-KY-T-- R TF----F--- Site 1880
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -AI-KS-PRP R EY----V--- Site 1880
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -LF-YK-N-- P VF----T--- Site 1880
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -EM-N----- P NY----T--- Site 1877
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -AL-GS---- - GCRASVL---  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -LF-YK-N-- P VF----A--- Site 1903
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -GF-SS-L-- P NF----K--- Site 1880
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -LF-YS-N-- P RF----H--- Site 1880
Ajellomyces.capsulatus.CDK1 -GV-TS-F-- P DF----K--- Site 1880
Dictystelium.discoideum.MAPK3..Extracellular.signa -NI-AN-EQA R QF----I--- Site 1891
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -RD-VA-L-- P R--------- Site 1878
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -GF-SQ-L-- P LA----S--- Site 1877
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -KL-QP--TV R TY----V--- Site 1880
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -KL-KD-KAA K SY----I--- Site 1880
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -QT-IS-V-- A L--------- Site 1880
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -SA-CE-G-- A RA----H--- Site 1875
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -KL-QP--TV R NY----V--- Site 1880
Saccharomyces.cerevisiae.CDK1 -DI-VY-L-- P DF----K--- Site 1880
Lodderomyces.elongisporus.IME2 NEA-KP-L-- A SN----L--- Site 1879
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -RM-PS-HEA R TY----I--- Site 1880
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -KT-RK-Q-- K YF----Y--- Site 1879
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -LF-YS-N-- P RF----H--- Site 1880
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -SM-N----- E NY----S--- Site 1877
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -SI-G----- P SF----G--- Site 1877
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -KT-RK-R-- K YF----H--- Site 1880
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -SG-TK-T-- T RF----F--- Site 1879
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -VF-SM-N-- Q YF----S--- Site 1892
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -EM-N----- P NY----T--- Site 1877
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -GV-ES-L-- P DY----K--- Site 1880
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -RD-VS-L-- P R--------- Site 1880
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -GI-VH-M-- P EY----R--- Site 1880
Salmo.salar.CDK1 -GV-TS-M-- P DY----K--- Site 1880
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -GM-SS-L-- P DY----V--- Site 1880
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -EL-TE-L-- P DY----N--- Site 1880
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -EM-N----- P NY----T--- Site 1877
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 REG-SR-L-- A QK----L--- Site 1879
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -DI-KK-M-- P EH----S--- Site 1880
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -SS-RK-Q-- K YF----C--- Site 1879
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -KL-ED-KAA K SY----I--- Site 1880
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -YA-CE-G-- A KN----H--- Site 1879
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -AG-TK-T-- T RF----F--- Site 1879
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -CI-IN-MKA R NY----L--- Site 1880
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -GV-SS-N-- D EF----K--- Site 1877
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -GF-SK-L-- P LV----G--- Site 1880
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -VF-ST-N-- Q FF----S--- Site 1892
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -RL-QP--TV R NY----V--- Site 1880
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -RM-DE-NEA A KY----I--- Site 1891
Candida.glabrata.IME2 ELS-KA-Y-- A AK----L--- Site 1879
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -EG-YQ-L-- A SS----M--- Site 1878
Schizosaccharomyces.pombe.IME2 DRA-EL-L-- A NK----L--- Site 1879
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -NI-KS-KRA R EY----I--- Site 1880
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -GV-TH-L-- S DY----V--- Site 1880
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -AA-RK-A-- H HF----FKRN Site 1879
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -GV-TS-I-- S EF----R--- Site 1877
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -IF-RS-N-- Q FF----R--- Site 1892
Branchiostoma.floridae.CDK1 -GV-SQ-L-- P DY----K--- Site 1880
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -KT-RK-Q-- K YF----Y--- Site 1879
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -TM-N----- P NY----M--- Site 1877
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -SL-RL-R-- P EF----Y--- Site 1879
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -SM-N----- P NY----K--- Site 1877
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -EG-YQ-L-- S SA----M--- Site 1879
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -RT-RK-Q-- K YF----Y--- Site 1879
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -QA-PK-A-- R KF----F--- Site 1879
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -GV-TS-M-- P DY----K--- Site 1880
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -AV-GA-ERV R AY----I--- Site 1880
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -KI-SS-ESA R NY----I--- Site 1880
Lachancea.thermotolerans.SKY1 -TG-RH-A-- R TF----F--- Site 1880
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -ELLSV-I-- P VY----I--- Site 1880
Dictyostelium.discoideum.CDK1 -GV-TK-L-- P EY----V--- Site 1880
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -KL-QS-AEA K NY----M--- Site 1880
Xenopus.tropicalis.IME2 -GV-TT-M-- P DY----K--- Site 1880
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -AG-TK-T-- S RF----F--- Site 1879
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -DK-YNIELD P R--------- Site 1880
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -GV-TT-M-- P DY----K--- Site 1880
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -GV-SQ-L-- P DY----K--- Site 1880
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -GV-SK-L-- P NY----N--- Site 1880
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -AI-KS---- - PFAGTML---  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -QA-PK-A-- R KF----F--- Site 1880
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -EM-N----- P NY----T--- Site 1877
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -DM-N----- P HY----K--- Site 1877
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -GY-SD-L-- P LV----K--- Site 1875
Encephalitozoon.cuniculi.CDK1 -NV-EN-F-- P NY----K--- Site 1880
Saccharomyces.kluyveri.IME2 QNA-PS-L-- A AR----L--- Site 1879
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -KT-RK-R-- K YF----H--- Site 1879
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -CI-IN-LKA R NY----L--- Site 1880
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -GV-SK-L-- P NY----N--- Site 1880
Cryptococcus.neoformans.IME2 -SG-IK-L-- A KN----V--- Site 1879
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -AA-CK-A-- H HF----FKRN Site 1879
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -AG-KY-S-- K EF----F--- Site 1879
Candida.lusitaniae.IME2 LEA-IE-L-- S QN----L--- Site 1879
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -AG-TK-T-- T RF----F--- Site 1879
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -DI-RK-M-- P EH----H--- Site 1880
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -EI-TE-L-- P DY----N--- Site 1880
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -VF-SS-N-- L FF----T--- Site 1892
Gallus.gallus.CDK2 -GV-TA-L-- P DY----K--- Site 1880
Emericella.nidulans.CDK1 -GV-TS-F-- P DF----K--- Site 1880
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -KF-KQ-S-- - RA----M---  
Homo.sapiens.CDK1 -EV-ES-L-- Q DY----K--- Site 1880
Candida.albicans.CDK1 -DV-NY-L-- P DF----K--- Site 1880
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -DK-YNIELD P R--------- Site 1880
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -AV-GA-ERV R AY----I--- Site 1880
Mus.musculus.ICK..Serine.threonine.protein.kinase. -EG-YQ-L-- S SA----M--- Site 1878
Saccharomyces.castelli.IME2 NHV-AE-L-- A SK----L--- Site 1879
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -KT-KK-R-- R YV----H--- Site 1879
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -DM-CS-L-- P DY----V--- Site 1880
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -GV-HS-L-- P HF----K--- Site 1880
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -SM-N----- P NY----T--- Site 1877
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -FE------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -GM-SN-L-- P DY----V--- Site 1880
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -NV-DN-Y-- E LY----E--- Site 1880
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -AG-TK-T-- T RF----F--- Site 1879
Acyrthosiphon.pisum.CDK1 -GV-DQ-L-- P DF----K--- Site 1880
Candida.tropicalis.CDK1 NDA-VY-L-- A NK----L--- Site 1879
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -DI-KK-M-- P EH----H--- Site 1880
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -QM-N----- S NY----T--- Site 1877
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -DK-YHIELD P R--------- Site 1880
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -GI-LS-N-- E EF----K--- Site 1877
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -NK-YQLELD P Q--------- Site 1880
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -GI-SS-N-- E EF----K--- Site 1877
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -KL-ED-KAA K SY----I--- Site 1880
Candida.albicans.SSN3..Serine.threonine.protein.ki -NL-NK-Y-- P EY----L--- Site 1880
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -KM-KQ-R-- S AH----M--- Site 1879
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -EM-N----- P NY----T--- Site 1877
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -KL-ES-PEA K SY----V--- Site 1891
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -NW-EK-L-- P GC----E--- Site 1880
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -DK-YNIELD P R--------- Site 1880
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -AG-TK-T-- S RF----F--- Site 1879
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -GY-ND-L-- P AV----K--- Site 1877
Candida.dubliniensis.IME2 TEA-LF-L-- T NK----L--- Site 1879
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -KL-QP--TV R NY----V--- Site 1880
Aspergillus.niger.IME2 REG-SR-L-- A QK----L--- Site 1879
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -KI-SS-EAA R NY----I--- Site 1880
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -IF-SK-S-- P IF----A--- Site 1880
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -GV-HS-L-- P HF----K--- Site 1880
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -DK-YNIELD P R--------- Site 1880
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -IG-PK-T-- H KY----F--- Site 1879
Schizosaccharomyces.japonicus.IME2 PEA-YE-L-- A KD----L--- Site 1879
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -RL-QP--TV R NY----V--- Site 1880
Gallus.gallus.CDK1 -DV-ES-L-- Q DY----K--- Site 1880
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -SM-TK-L-- P DY----K--- Site 1880
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -TM-N----- P NY----M--- Site 1877
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -KQ-SV-L-- T K--------- Site 1879
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -SM-N----- P NY----K--- Site 1877
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -RL-QS-DEA K NY----M--- Site 1880
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -GK-YGLHLP S E--------- Site 1891
Kluyveromyces.waltii.IME2 EKA-EV-L-- A SR----L--- Site 1878
Debaryomyces.hansenii.SKY1 -EG-YY-T-- R DF----F--- Site 1880
Saccharomyces.cerevisiae.IME2 DDA-SN-L-- V HK----L--- Site 1878
Schizosaccharomyces.japonicus.b.IME2 QMA-GM-L-- A SK----L--- Site 1879
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -HD-VA-V-- P R--------- Site 1880
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -KK-YHIELD P H--------- Site 1880
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -ELLSV-I-- P VY----I--- Site 1880
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -RD-VA-L-- P R--------- Site 1878
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -GM-N----- P NY----E--- Site 1877
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -KL-QS-TDA K NY----I--- Site 1880
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -IF-SK-S-- P IF----A--- Site 1877
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -KL-NQ--SV R TY----V--- Site 1880
Candida.albicans.IME2 TEA-LF-L-- T NK----L--- Site 1878
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -VD-VT-L-- P R--------- Site 1880
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -AF-FK-L-- P LA----K--- Site 1880
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -KI-SS-ESA R NY----I--- Site 1880
Kluyveromyces.lactis.IME2 LDS-KP-L-- Y QA----L--- Site 1879
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -AV-GA-ERV R AY----I--- Site 1880
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -KL-QP--TV R NY----V--- Site 1880
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -KI-SS-EHA R TY----I--- Site 1880
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -KI-SS-EHA R TY----I--- Site 1880
Amphimedon.queenslandica.CDK1 -GI-SS-F-- P DY----K--- Site 1880
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -IF-KS-N-- G FF----H--- Site 1892
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -GV-TQ-L-- P DY----K--- Site 1880
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -GY-TE-L-- P AV----K--- Site 1877
Neurospora.crassa.IME2 REG-TR-L-- A GK----L--- Site 1879
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -GV-SH-L-- S DY----V--- Site 1880
Dictyostelium.discoideum.DYRK2..Probable.serine.th -NS-TR-K-- D IF----F--- Site 1879
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -RE-VS-L-- P R--------- Site 1878
Hydra.magnipapillata.CDK1 -GV-TD-L-- K EF----K--- Site 1880
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -GF-SK-L-- P LV----S--- Site 1880
Ashbya.gossypii.IME2 LQA-EH-L-- A SR----L--- Site 1879
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -QS-KR-A-- K YF----I--- Site 1880
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -SM-N----- P NY----M--- Site 1877
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -AI-RS---- - EYGASVI---  
Schizosaccharomyces.pombe.b.IME2 SQA-KE-L-- A KR----L--- Site 1879
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -CI-IN-LKA R NY----L--- Site 1880
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -VG-TK-S-- T RF----F--- Site 1879
Schizosaccharomyces.pombe.CDK1 -GV-TL-L-- Q DY----K--- Site 1880
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -KT-RK-Q-- K YF----Y--- Site 1879
Saccoglossus.kowalevskii.CDK1 -GV-NK-L-- P DF----K--- Site 1880
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -KL-QP--TV R TY----V--- Site 1880
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -GV-SQ-M-- P DY----Q--- Site 1880
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -GV-TQ-L-- P DY----K--- Site 1880
Yarrowia.lipolytica.IME2 SRH-PE-L-- C SK----L--- Site 1879
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -YL-EK-Y-- P EY----D--- Site 1880
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -GV-TS-M-- P DY----K--- Site 1880
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -KF------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -TM-N----- P NY----M--- Site 1877
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -TM-N----- P NY----M--- Site 1877
Species Residue at Site 2937
in 'msaprobs'
muscle

The residue for every species at site 2937 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -IG-PK-T-- H KY----F--- Site 1880
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -TA-CE-G-- A KA----H--- Site 1875
Scheffersomyces.stipitis.SKY1 -EG-YY-T-- R DF----F--- Site 1880
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -AM-TK-L-- P DY----K--- Site 1880

Generated by PhyloBot at 03:28, October 16th 2019
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