cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 2792 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2792 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2792 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2792 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -----CE-IL G SP-------D Site 1799
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -----IE-LL G KP-------P Site 1799
Danio.rerio.CDK1 -----FR-TL G TP-------D Site 1799
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -----ME-LI G TP-------S Site 1799
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -----FR-LL G TP-------T Site 1799
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -----FR-LI G TP-------N Site 1799
Candida.guilliermondii.IME2 -----FK-VL G NP-------A Site 1799
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -----SEKKM L TP-------V Site 1799
Chlamydomonas.reinhardtii.LF4 -----HN-IL G TP-------P Site 1799
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -----IR-VL G TP-------S Site 1799
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -----SEKKM S TP-------- Site 1799
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -----FN-VM G FP-------A Site 1799
Schizosaccharomyces.octosporus.b.IME2 -----CE-IL G NP-------L Site 1799
Candida.albicans.MAPK3..Extracellular.signal.regul -----ME-VL G TP-------N Site 1799
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -----AK-VL G TD-------E Site 1799
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -----S---- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. -----TQ-VL G TP-------P Site 1799
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -----EK-IL G PI-------P Site 1799
Aedes.aegypti.CDK1 -----FR-IL K TP-------T Site 1799
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -----ER-IL G PL-------P Site 1799
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -----ER-IL G PI-------P Site 1799
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -----ME-VL G LP-------P Site 1799
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -----SQ-TQ G LP-------A Site 1799
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -----RR-TL G DL-------I Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -----FK-IL G TP-------S Site 1799
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -----AK-VL G TE-------E Site 1799
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -----LG-VL G SP-------S Site 1799
Strongylocentrotus.purpuratus.CDK1 -----FR-TM G TP-------D Site 1799
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -----SEKKL S TP-------I Site 1799
Drosophila.melanogaster.CDK1 -----FR-IL K TP-------T Site 1799
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -----CD--- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -----ME-LL G KM-------P Site 1799
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -----FR-LL G TP-------T Site 1799
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -----FR-VL G TP-------T Site 1799
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -----IE-QL G TP-------S Site 1799
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -----MM-CL G NL-------I Site 1799
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -----IE-QL G TP-------S Site 1799
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -----LK-VT G VP-------G Site 1799
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -----TD-LL G TP-------S Site 1799
Bombus.terrestris.CDK1 -----FR-TL G TP-------D Site 1799
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -----IE-LL G KV-------P Site 1799
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -----TK-CL G NL-------I Site 1799
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -----IE-QL G TP-------C Site 1799
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -----SR-LC G SP-------C Site 1799
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -----HD-VI G TP-------C Site 1799
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -----VK-IL G KP-------T Site 1799
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -----VR-VL G CP-------S Site 1799
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -----SEKKM S TP-------- Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ALDNSGNISN Q PT-------- Site 2487
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -----SQ-TQ G LP-------T Site 1799
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -----AK-VL G TD-------E Site 1799
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -----TD-LL G TP-------S Site 1799
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -----RK-TL G DL-------I Site 1799
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -----SQ-TQ G LP-------G Site 1799
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -----FK-EL G TP-------S Site 1799
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -----QK-VL G PL-------P Site 1799
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -----ER-IL G PV-------P Site 1799
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -----FK-DL G TP-------S Site 1799
Naegleria.gruberi.LF4 -----HK-VV G TP-------S Site 1799
Saccharomyces.bayanus.IME2 -----LE-VL G TP-------I Site 1799
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -----AK-VL G TD-------E Site 1799
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -----MK-VT G TP-------S Site 1799
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -----CS-AL G TP-------N Site 1799
Dictyostelium.discoideum.DYRK1..Probable.serine.th -----IE-VL D LP-------P Site 1799
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -----VE-VL G IP-------P Site 1799
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -----IE-LL G MP-------S Site 1799
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -----QK-VL G PL-------P Site 1799
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -----LK-TI P LP-------S Site 1799
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -----HA-II D PS-------H Site 1799
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -----ME-VL G LP-------P Site 1799
Aspergillus.nidulans.IME2 -----CE-IM G SP-------G Site 1799
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -----MT-IR G SR-------E Site 1799
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -----ID-LL G TP-------S Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -----CQ-VL G TP-------K Site 1799
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -----FR-TL G TP-------D Site 1799
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -----IE-QL G TP-------C Site 1799
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -----IK-VL G TP-------T Site 1799
Penicillium.marneffei.IME2 -----CE-IM G SP-------G Site 1799
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -----MR-LT G TP-------P Site 1799
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -----LE-TI P VI-------R Site 1799
Drosophila.melanogaster.MAK -----CS-VL G TP-------D Site 1799
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -----ME-CK G KF-------S Site 1799
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -----MD-LK G KM-------P Site 1799
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -----SR-LC G SP-------C Site 1799
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -----IR-VL G KP-------T Site 1799
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -----VQ-LL G TP-------S Site 1799
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -----IE-QL G TP-------C Site 1799
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -----IE-QL G TP-------S Site 1799
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -----ER-IL G PL-------P Site 1799
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -----MT-IR G SR-------E Site 1799
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -----SEKKM S TP-------- Site 1799
Candida.parapsilosis.IME2 -----IQ-TL G SP-------T Site 1799
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -----ME-LL G TP-------T Site 1799
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -----IK-VL G TP-------T Site 1799
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -----IE-QL G TP-------S Site 1799
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -----AK-VL G TE-------D Site 1799
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -----ER-IL G PL-------P Site 1799
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -----LD-TI P VV-------R Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -----FR-IL G TP-------T Site 1799
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -----AK-VL G TE-------D Site 1799
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -----IE-IL G SP-------Q Site 1799
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -----LK-VT G VP-------G Site 1799
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -----VE-VL G IP-------P Site 1799
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -----AK-VL G TD-------E Site 1799
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -----IK-VL G TP-------T Site 1799
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -----IK-VL G TP-------T Site 1799
Candida.orthopsilosis.IME2 -----IQ-TL G SP-------T Site 1799
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -----FE-AL G TP-------T Site 1799
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -----IE-LL G TP-------E Site 1799
Debaryomyces.hansenii.IME2 -----LE-VL G SP-------T Site 1799
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -----IK-VL G TP-------T Site 1799
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -----LE-VL G TP-------T Site 1799
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -----FE-II G TP-------N Site 1799
Caenorhabditis.briggsae.CDK1 -----FR-IL G TP-------T Site 1799
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -----AK-VL G TE-------E Site 1799
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -----LR-IL G TP-------S Site 1799
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -----IE-LL G MP-------P Site 1799
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -----FD-VI G LP-------E Site 1799
Monosiga.brevicollis.CDK1 -----FR-VL G TP-------T Site 1799
Saccharomyces.cerevisiae.SKY1 -----IE-LL G EL-------P Site 1799
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -----FD-VL G TP-------G Site 1799
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -----VK-CF G NL-------M Site 1799
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -----IK-VL G TP-------T Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -----ME--- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -----LE-TI P PP-------S Site 1799
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -----MT-CL G NL-------I Site 1799
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -----FN-LL G EP-------N Site 1799
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -----QK-VL G PL-------P Site 1799
Ajellomyces.capsulatus.CDK1 -----FK-LL G TP-------D Site 1799
Dictystelium.discoideum.MAPK3..Extracellular.signa -----IE-TI G SP-------S Site 1799
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -----LD-VI G LP-------G Site 1799
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -----VQ-LL G TP-------S Site 1799
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -----IE-QL G TP-------C Site 1799
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -----LK-VT G VP-------G Site 1799
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -----FE-LT G RP-------T Site 1799
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -----TD-LL G TP-------P Site 1799
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -----IE-QL G TP-------C Site 1799
Saccharomyces.cerevisiae.CDK1 -----FR-VL G TP-------N Site 1799
Lodderomyces.elongisporus.IME2 -----LQ-IL G SP-------T Site 1799
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -----MR-LT G TP-------P Site 1799
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -----ER-IL G PV-------P Site 1799
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -----QK-VL G PL-------P Site 1799
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -----IK-VL G TP-------T Site 1799
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -----VT-SL P NV-------T Site 1799
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -----ER-IL G PI-------P Site 1799
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -----SQ-TQ G LP-------A Site 1799
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -----RK-TL G DL-------I Site 1799
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -----IK-VL G TP-------T Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -----FR-VL G TP-------T Site 1799
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -----FD-LI G LP-------P Site 1799
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -----CE-VL G PV-------K Site 1799
Salmo.salar.CDK1 -----FR-TL G TP-------D Site 1799
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -----FE-TL G TP-------T Site 1799
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -----LR-IL G TP-------N Site 1799
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -----HA-II D PN-------H Site 1799
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -----IK-VL G TP-------T Site 1799
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -----LRQSP G SLKAVLKTME Site 1799
Aspergillus.fumigatus.IME2 -----CE-IM G SP-------G Site 1799
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -----FN-VM G FP-------A Site 1799
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -----ER-TH G PL-------P Site 1799
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -----LK-VT G HP-------G Site 1799
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -----ID-LL G TP-------S Site 1799
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -----SQ-TQ G LP-------A Site 1799
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -----LG-IL G SP-------S Site 1799
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -----FR-LL G TP-------S Site 1799
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -----VQ-LL G TP-------S Site 1799
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -----RK-TL G EL-------I Site 1799
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -----IE-QL G TP-------S Site 1799
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -----LK-LT G TP-------P Site 1799
Candida.glabrata.IME2 -----LE-VL G TP-------H Site 1799
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -----CQ-VL G TP-------K Site 1799
Schizosaccharomyces.pombe.IME2 -----CE-IL G SP-------D Site 1799
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -----ME-VL G TP-------N Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -----FR-VL G TP-------T Site 1799
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -----CE-TQ G LP-------K Site 1799
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -----SEKKM S TP-------- Site 1799
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -----FR-LL G TP-------T Site 1799
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -----IR-TL G KL-------I Site 1799
Branchiostoma.floridae.CDK1 -----FR-TL G TP-------D Site 1799
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -----ER-IL G PI-------P Site 1799
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -----IK-IL G TP-------S Site 1799
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -----MS-VC G PL-------P Site 1799
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -----IK-VL G TP-------T Site 1799
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -----CQ-VL G TP-------K Site 1799
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -----EK-IL G PI-------P Site 1799
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -----VE-VL G IP-------P Site 1799
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -----FR-TL G TP-------D Site 1799
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -----MT-VL G TP-------S Site 1799
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -----LR-LV G TP-------G Site 1799
Lachancea.thermotolerans.SKY1 -----IE-LL G EI-------P Site 1799
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -----LD-SI P VV-------H Site 1799
Dictyostelium.discoideum.CDK1 -----FR-VL G TP-------D Site 1799
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -----MK-IT G TP-------P Site 1799
Xenopus.tropicalis.IME2 -----FR-TL G TP-------D Site 1799
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -----SQ-TQ G LP-------A Site 1799
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -----AK-VL G TE-------D Site 1799
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -----FR-TL G TP-------D Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -----FR-TL G TP-------T Site 1799
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -----WE-VL G VP-------T Site 1799
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -----IE-VT G RP-------S Site 1799
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -----VE-VL G IP-------P Site 1799
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -----IK-VL G TP-------T Site 1799
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -----VK-VM G TP-------T Site 1799
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -----ID-TI G SP-------N Site 1799
Encephalitozoon.cuniculi.CDK1 -----FK-VL G TP-------N Site 1799
Saccharomyces.kluyveri.IME2 -----LE-VL G TP-------F Site 1799
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -----ER-IL G PI-------P Site 1799
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -----LG-IL G SP-------S Site 1799
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -----WE-VL G VP-------T Site 1799
Cryptococcus.neoformans.IME2 -----CD-TM G DP-------S Site 1799
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -----CE-TQ G LP-------K Site 1799
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -----IE-LL G KV-------P Site 1799
Candida.lusitaniae.IME2 -----LK-VL G HP-------G Site 1799
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -----SQ-TQ G LP-------A Site 1799
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -----FN-VM G FP-------Q Site 1799
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -----LR-VL G TP-------N Site 1799
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -----RK-TL G DL-------I Site 1799
Gallus.gallus.CDK2 -----FR-TL G TP-------D Site 1799
Emericella.nidulans.CDK1 -----FR-IL G TP-------D Site 1799
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -----HD-VI G TP-------A Site 1799
Homo.sapiens.CDK1 -----FR-AL G TP-------N Site 1799
Candida.albicans.CDK1 -----FR-IL G TP-------N Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -----AK-VL G TE-------D Site 1799
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -----MM-VL G TP-------S Site 1799
Mus.musculus.ICK..Serine.threonine.protein.kinase. -----CQ-VL G TP-------K Site 1799
Saccharomyces.castelli.IME2 -----LE-VL G TP-------Y Site 1799
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -----ER-VL G PI-------P Site 1799
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -----FE-TL G TP-------T Site 1799
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -----FL-VL G TP-------N Site 1799
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -----IK-VL G TP-------T Site 1799
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -----CT-IF G WK-------E Site 1799
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -----FE-AL G TP-------T Site 1799
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -----SQ-LC G SI-------T Site 1799
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -----SQ-TQ G LP-------A Site 1799
Acyrthosiphon.pisum.CDK1 -----FR-TL G TP-------T Site 1799
Candida.tropicalis.CDK1 -----LR-IL G SP-------Y Site 1799
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -----FN-VM G FP-------Q Site 1799
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -----IK-VL G TP-------T Site 1799
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -----AK-VL G TE-------E Site 1799
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -----FR-IL G TP-------T Site 1799
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -----AK-VL G TD-------E Site 1799
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -----FR-LL G TP-------S Site 1799
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -----LK-VT G HP-------G Site 1799
Candida.albicans.SSN3..Serine.threonine.protein.ki -----IE-IL G TP-------T Site 1799
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -----HN-II G TP-------S Site 1799
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -----IK-VL G TP-------S Site 1799
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -----MK-VA G TP-------G Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -----FR-LC G SP-------T Site 1799
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -----AK-VL G TE-------D Site 1799
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -----SQ-TQ G LP-------G Site 1799
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -----FK-DL G TP-------S Site 1799
Candida.dubliniensis.IME2 -----LK-IL G TP-------F Site 1799
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -----IE-QL G TP-------S Site 1799
Aspergillus.niger.IME2 -----CE-IM G SP-------G Site 1799
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -----LR-LV G TP-------E Site 1799
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -----VL-KV G NL-------S Site 1799
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -----FL-VL G TP-------N Site 1799
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -----AK-FL G TE-------D Site 1799
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -----VE-VL G MP-------P Site 1799
Schizosaccharomyces.japonicus.IME2 -----CE-VL G SP-------K Site 1799
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -----IE-QL G TP-------D Site 1799
Gallus.gallus.CDK1 -----FR-AL G TP-------N Site 1799
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -----FR-LL G TP-------T Site 1799
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -----IK-VL G TP-------T Site 1799
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -----FK-KL G TP-------I Site 1799
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -----IK-VL G TP-------T Site 1799
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -----MK-VT G TP-------P Site 1799
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -----AT-VL G TK-------E Site 1799
Kluyveromyces.waltii.IME2 -----LE-VL G TP-------H Site 1799
Debaryomyces.hansenii.SKY1 -----IE-LV G PF-------P Site 1799
Saccharomyces.cerevisiae.IME2 -----LE-VL G TP-------I Site 1799
Schizosaccharomyces.japonicus.b.IME2 -----CK-IL G NP-------T Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -----FD-VI G LP-------E Site 1799
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -----AK-VL G TD-------E Site 1799
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -----LE-SI P VV-------H Site 1799
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -----LD-II G LP-------G Site 1799
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -----IK-IM G IP-------T Site 1799
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -----MK-IT G TP-------T Site 1799
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -----VL-KV G NL-------T Site 1799
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -----IE-QL G TP-------S Site 1799
Candida.albicans.IME2 -----LK-IL G TP-------F Site 1799
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -----FD-II G LP-------S Site 1799
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -----FK-LF G TP-------T Site 1799
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -----LR-LV G TP-------G Site 1799
Kluyveromyces.lactis.IME2 -----LD-LL G SP-------D Site 1799
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -----MM-VL G TP-------S Site 1799
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -----IE-QL G TP-------C Site 1799
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -----ME-VV G TP-------S Site 1799
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -----SEKKM S TP-------- Site 1799
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -----ME-VV G TP-------S Site 1799
Amphimedon.queenslandica.CDK1 -----FR-TL G TP-------D Site 1799
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -----IR-TL G KL-------I Site 1799
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -----FR-TL G TP-------T Site 1799
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -----FK-EL G TP-------N Site 1799
Neurospora.crassa.IME2 -----CE-IM G SP-------G Site 1799
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -----FR-VL G TP-------N Site 1799
Dictyostelium.discoideum.DYRK2..Probable.serine.th -----ME-VL G AP-------P Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -----FD-LI G LP-------P Site 1799
Hydra.magnipapillata.CDK1 -----FR-VL G TP-------N Site 1799
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -----VQ-LL G TP-------N Site 1799
Ashbya.gossypii.IME2 -----LE-LL G TP-------H Site 1799
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -----HA-II N PA-------H Site 1799
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -----ME-LL G MP-------P Site 1799
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -----IK-IL G TP-------S Site 1799
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -----MN-VI P HP-------S Site 1799
Schizosaccharomyces.pombe.b.IME2 -----CE-IL G NP-------G Site 1799
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -----LG-IL G SP-------S Site 1799
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -----SQ-TQ G LP-------G Site 1799
Schizosaccharomyces.pombe.CDK1 -----FQ-VL G TP-------N Site 1799
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -----ER-IL G PV-------P Site 1799
Saccoglossus.kowalevskii.CDK1 -----FR-TM G TP-------D Site 1799
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -----SEKKM S TP-------I Site 1799
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -----IE-QL G TP-------C Site 1799
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -----FR-TL G TP-------S Site 1799
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -----IRHHP G SLKPILKTME Site 1799
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -----FR-ML G TP-------S Site 1799
Yarrowia.lipolytica.IME2 -----VA-LL G TP-------G Site 1799
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -----LE-VL G TP-------D Site 1799
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -----FR-TL G TP-------D Site 1799
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -----CC-IF G IK-------P Site 1799
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -----IK-VL G TP-------T Site 1799
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -----IK-IL G TP-------S Site 1799
Species Residue at Site 2792
in 'msaprobs'
muscle

The residue for every species at site 2792 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -----VE-VL G MP-------P Site 1799
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -----TD-LL G TP-------S Site 1799
Scheffersomyces.stipitis.SKY1 -----IE-LI G PF-------P Site 1799
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -----FR-LL G TP-------T Site 1799

Generated by PhyloBot at 02:21, October 16th 2019
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