cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 2790 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2790 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2790 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 2790 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -------CE- I LGSP------ Site 1797
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -------IE- L LGKP------ Site 1797
Danio.rerio.CDK1 -------FR- T LGTP------ Site 1797
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -------ME- L IGTP------ Site 1797
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -------FR- L LGTP------ Site 1797
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -------FR- L IGTP------ Site 1797
Candida.guilliermondii.IME2 -------FK- V LGNP------ Site 1797
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -------SEK K MLTP------ Site 1797
Chlamydomonas.reinhardtii.LF4 -------HN- I LGTP------ Site 1797
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -------IR- V LGTP------ Site 1797
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -------SEK K MSTP------ Site 1797
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - ----------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -------FN- V MGFP------ Site 1797
Schizosaccharomyces.octosporus.b.IME2 -------CE- I LGNP------ Site 1797
Candida.albicans.MAPK3..Extracellular.signal.regul -------ME- V LGTP------ Site 1797
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -------AK- V LGTD------ Site 1797
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -------S-- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. -------TQ- V LGTP------ Site 1797
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -------EK- I LGPI------ Site 1797
Aedes.aegypti.CDK1 -------FR- I LKTP------ Site 1797
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -------ER- I LGPL------ Site 1797
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -------ER- I LGPI------ Site 1797
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -------ME- V LGLP------ Site 1797
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -------SQ- T QGLP------ Site 1797
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -------RR- T LGDL------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -------FK- I LGTP------ Site 1797
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -------AK- V LGTE------ Site 1797
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -------LG- V LGSP------ Site 1797
Strongylocentrotus.purpuratus.CDK1 -------FR- T MGTP------ Site 1797
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -------SEK K LSTP------ Site 1797
Drosophila.melanogaster.CDK1 -------FR- I LKTP------ Site 1797
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -------CD- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -------ME- L LGKM------ Site 1797
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -------FR- L LGTP------ Site 1797
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -------FR- V LGTP------ Site 1797
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -------IE- Q LGTP------ Site 1797
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -------MM- C LGNL------ Site 1797
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -------IE- Q LGTP------ Site 1797
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -------LK- V TGVP------ Site 1797
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -------TD- L LGTP------ Site 1797
Bombus.terrestris.CDK1 -------FR- T LGTP------ Site 1797
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -------IE- L LGKV------ Site 1797
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -------TK- C LGNL------ Site 1797
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -------IE- Q LGTP------ Site 1797
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d -------SR- L CGSP------ Site 1797
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -------HD- V IGTP------ Site 1797
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -------VK- I LGKP------ Site 1797
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -------VR- V LGCP------ Site 1797
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -------SEK K MSTP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 SGALDNSGNI S NQPT------ Site 2485
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -------SQ- T QGLP------ Site 1797
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -------AK- V LGTD------ Site 1797
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -------TD- L LGTP------ Site 1797
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -------RK- T LGDL------ Site 1797
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -------SQ- T QGLP------ Site 1797
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -------FK- E LGTP------ Site 1797
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -------QK- V LGPL------ Site 1797
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -------ER- I LGPV------ Site 1797
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -------FK- D LGTP------ Site 1797
Naegleria.gruberi.LF4 -------HK- V VGTP------ Site 1797
Saccharomyces.bayanus.IME2 -------LE- V LGTP------ Site 1797
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -------AK- V LGTD------ Site 1797
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -------MK- V TGTP------ Site 1797
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -------CS- A LGTP------ Site 1797
Dictyostelium.discoideum.DYRK1..Probable.serine.th -------IE- V LDLP------ Site 1797
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -------VE- V LGIP------ Site 1797
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -------IE- L LGMP------ Site 1797
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -------QK- V LGPL------ Site 1797
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -------LK- T IPLP------ Site 1797
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -------HA- I IDPS------ Site 1797
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -------ME- V LGLP------ Site 1797
Aspergillus.nidulans.IME2 -------CE- I MGSP------ Site 1797
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -------MT- I RGSR------ Site 1797
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -------ID- L LGTP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -------CQ- V LGTP------ Site 1797
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -------FR- T LGTP------ Site 1797
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -------IE- Q LGTP------ Site 1797
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -------IK- V LGTP------ Site 1797
Penicillium.marneffei.IME2 -------CE- I MGSP------ Site 1797
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -------MR- L TGTP------ Site 1797
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -------LE- T IPVI------ Site 1797
Drosophila.melanogaster.MAK -------CS- V LGTP------ Site 1797
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -------ME- C KGKF------ Site 1797
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -------MD- L KGKM------ Site 1797
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de -------SR- L CGSP------ Site 1797
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -------IR- V LGKP------ Site 1797
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -------VQ- L LGTP------ Site 1797
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -------IE- Q LGTP------ Site 1797
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -------IE- Q LGTP------ Site 1797
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -------ER- I LGPL------ Site 1797
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -------MT- I RGSR------ Site 1797
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -------SEK K MSTP------ Site 1797
Candida.parapsilosis.IME2 -------IQ- T LGSP------ Site 1797
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -------ME- L LGTP------ Site 1797
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -------IK- V LGTP------ Site 1797
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -------IE- Q LGTP------ Site 1797
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -------AK- V LGTE------ Site 1797
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -------ER- I LGPL------ Site 1797
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -------LD- T IPVV------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -------FR- I LGTP------ Site 1797
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -------AK- V LGTE------ Site 1797
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -------IE- I LGSP------ Site 1797
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -------LK- V TGVP------ Site 1797
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -------VE- V LGIP------ Site 1797
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -------AK- V LGTD------ Site 1797
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -------IK- V LGTP------ Site 1797
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -------IK- V LGTP------ Site 1797
Candida.orthopsilosis.IME2 -------IQ- T LGSP------ Site 1797
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -------FE- A LGTP------ Site 1797
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -------IE- L LGTP------ Site 1797
Debaryomyces.hansenii.IME2 -------LE- V LGSP------ Site 1797
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -------IK- V LGTP------ Site 1797
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -------LE- V LGTP------ Site 1797
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -------FE- I IGTP------ Site 1797
Caenorhabditis.briggsae.CDK1 -------FR- I LGTP------ Site 1797
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -------AK- V LGTE------ Site 1797
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -------LR- I LGTP------ Site 1797
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -------IE- L LGMP------ Site 1797
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -------FD- V IGLP------ Site 1797
Monosiga.brevicollis.CDK1 -------FR- V LGTP------ Site 1797
Saccharomyces.cerevisiae.SKY1 -------IE- L LGEL------ Site 1797
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -------FD- V LGTP------ Site 1797
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -------VK- C FGNL------ Site 1797
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -------IK- V LGTP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -------ME- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -------LE- T IPPP------ Site 1797
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -------MT- C LGNL------ Site 1797
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -------FN- L LGEP------ Site 1797
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -------QK- V LGPL------ Site 1797
Ajellomyces.capsulatus.CDK1 -------FK- L LGTP------ Site 1797
Dictystelium.discoideum.MAPK3..Extracellular.signa -------IE- T IGSP------ Site 1797
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -------LD- V IGLP------ Site 1797
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -------VQ- L LGTP------ Site 1797
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -------IE- Q LGTP------ Site 1797
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -------LK- V TGVP------ Site 1797
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -------FE- L TGRP------ Site 1797
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -------TD- L LGTP------ Site 1797
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -------IE- Q LGTP------ Site 1797
Saccharomyces.cerevisiae.CDK1 -------FR- V LGTP------ Site 1797
Lodderomyces.elongisporus.IME2 -------LQ- I LGSP------ Site 1797
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -------MR- L TGTP------ Site 1797
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -------ER- I LGPV------ Site 1797
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -------QK- V LGPL------ Site 1797
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -------IK- V LGTP------ Site 1797
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -------VT- S LPNV------ Site 1797
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -------ER- I LGPI------ Site 1797
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -------SQ- T QGLP------ Site 1797
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -------RK- T LGDL------ Site 1797
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -------IK- V LGTP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -------FR- V LGTP------ Site 1797
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -------FD- L IGLP------ Site 1797
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -------CE- V LGPV------ Site 1797
Salmo.salar.CDK1 -------FR- T LGTP------ Site 1797
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -------FE- T LGTP------ Site 1797
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -------LR- I LGTP------ Site 1797
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -------HA- I IDPN------ Site 1797
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -------IK- V LGTP------ Site 1797
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -------LRQ S PGSLKAVLKT Site 1797
Aspergillus.fumigatus.IME2 -------CE- I MGSP------ Site 1797
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -------FN- V MGFP------ Site 1797
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -------ER- T HGPL------ Site 1797
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -------LK- V TGHP------ Site 1797
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -------ID- L LGTP------ Site 1797
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -------SQ- T QGLP------ Site 1797
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -------LG- I LGSP------ Site 1797
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -------FR- L LGTP------ Site 1797
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -------VQ- L LGTP------ Site 1797
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -------RK- T LGEL------ Site 1797
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -------IE- Q LGTP------ Site 1797
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -------LK- L TGTP------ Site 1797
Candida.glabrata.IME2 -------LE- V LGTP------ Site 1797
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -------CQ- V LGTP------ Site 1797
Schizosaccharomyces.pombe.IME2 -------CE- I LGSP------ Site 1797
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -------ME- V LGTP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -------FR- V LGTP------ Site 1797
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -------CE- T QGLP------ Site 1797
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -------SEK K MSTP------ Site 1797
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -------FR- L LGTP------ Site 1797
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -------IR- T LGKL------ Site 1797
Branchiostoma.floridae.CDK1 -------FR- T LGTP------ Site 1797
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -------ER- I LGPI------ Site 1797
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -------IK- I LGTP------ Site 1797
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -------MS- V CGPL------ Site 1797
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -------IK- V LGTP------ Site 1797
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -------CQ- V LGTP------ Site 1797
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -------EK- I LGPI------ Site 1797
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -------VE- V LGIP------ Site 1797
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -------FR- T LGTP------ Site 1797
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -------MT- V LGTP------ Site 1797
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -------LR- L VGTP------ Site 1797
Lachancea.thermotolerans.SKY1 -------IE- L LGEI------ Site 1797
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -------LD- S IPVV------ Site 1797
Dictyostelium.discoideum.CDK1 -------FR- V LGTP------ Site 1797
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -------MK- I TGTP------ Site 1797
Xenopus.tropicalis.IME2 -------FR- T LGTP------ Site 1797
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -------SQ- T QGLP------ Site 1797
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -------AK- V LGTE------ Site 1797
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -------FR- T LGTP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -------FR- T LGTP------ Site 1797
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -------WE- V LGVP------ Site 1797
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -------IE- V TGRP------ Site 1797
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -------VE- V LGIP------ Site 1797
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -------IK- V LGTP------ Site 1797
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -------VK- V MGTP------ Site 1797
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -------ID- T IGSP------ Site 1797
Encephalitozoon.cuniculi.CDK1 -------FK- V LGTP------ Site 1797
Saccharomyces.kluyveri.IME2 -------LE- V LGTP------ Site 1797
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -------ER- I LGPI------ Site 1797
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -------LG- I LGSP------ Site 1797
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -------WE- V LGVP------ Site 1797
Cryptococcus.neoformans.IME2 -------CD- T MGDP------ Site 1797
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -------CE- T QGLP------ Site 1797
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -------IE- L LGKV------ Site 1797
Candida.lusitaniae.IME2 -------LK- V LGHP------ Site 1797
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -------SQ- T QGLP------ Site 1797
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -------FN- V MGFP------ Site 1797
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -------LR- V LGTP------ Site 1797
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -------RK- T LGDL------ Site 1797
Gallus.gallus.CDK2 -------FR- T LGTP------ Site 1797
Emericella.nidulans.CDK1 -------FR- I LGTP------ Site 1797
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -------HD- V IGTP------ Site 1797
Homo.sapiens.CDK1 -------FR- A LGTP------ Site 1797
Candida.albicans.CDK1 -------FR- I LGTP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -------AK- V LGTE------ Site 1797
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -------MM- V LGTP------ Site 1797
Mus.musculus.ICK..Serine.threonine.protein.kinase. -------CQ- V LGTP------ Site 1797
Saccharomyces.castelli.IME2 -------LE- V LGTP------ Site 1797
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -------ER- V LGPI------ Site 1797
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -------FE- T LGTP------ Site 1797
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -------FL- V LGTP------ Site 1797
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -------IK- V LGTP------ Site 1797
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -------CT- I FGWK------ Site 1797
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -------FE- A LGTP------ Site 1797
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -------SQ- L CGSI------ Site 1797
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -------SQ- T QGLP------ Site 1797
Acyrthosiphon.pisum.CDK1 -------FR- T LGTP------ Site 1797
Candida.tropicalis.CDK1 -------LR- I LGSP------ Site 1797
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -------FN- V MGFP------ Site 1797
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -------IK- V LGTP------ Site 1797
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -------AK- V LGTE------ Site 1797
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -------FR- I LGTP------ Site 1797
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -------AK- V LGTD------ Site 1797
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -------FR- L LGTP------ Site 1797
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -------LK- V TGHP------ Site 1797
Candida.albicans.SSN3..Serine.threonine.protein.ki -------IE- I LGTP------ Site 1797
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -------HN- I IGTP------ Site 1797
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -------IK- V LGTP------ Site 1797
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -------MK- V AGTP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -------FR- L CGSP------ Site 1797
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -------AK- V LGTE------ Site 1797
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -------SQ- T QGLP------ Site 1797
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -------FK- D LGTP------ Site 1797
Candida.dubliniensis.IME2 -------LK- I LGTP------ Site 1797
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -------IE- Q LGTP------ Site 1797
Aspergillus.niger.IME2 -------CE- I MGSP------ Site 1797
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -------LR- L VGTP------ Site 1797
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -------VL- K VGNL------ Site 1797
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -------FL- V LGTP------ Site 1797
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -------AK- F LGTE------ Site 1797
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -------VE- V LGMP------ Site 1797
Schizosaccharomyces.japonicus.IME2 -------CE- V LGSP------ Site 1797
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -------IE- Q LGTP------ Site 1797
Gallus.gallus.CDK1 -------FR- A LGTP------ Site 1797
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -------FR- L LGTP------ Site 1797
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -------IK- V LGTP------ Site 1797
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -------FK- K LGTP------ Site 1797
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -------IK- V LGTP------ Site 1797
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -------MK- V TGTP------ Site 1797
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -------AT- V LGTK------ Site 1797
Kluyveromyces.waltii.IME2 -------LE- V LGTP------ Site 1797
Debaryomyces.hansenii.SKY1 -------IE- L VGPF------ Site 1797
Saccharomyces.cerevisiae.IME2 -------LE- V LGTP------ Site 1797
Schizosaccharomyces.japonicus.b.IME2 -------CK- I LGNP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -------FD- V IGLP------ Site 1797
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -------AK- V LGTD------ Site 1797
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -------LE- S IPVV------ Site 1797
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -------LD- I IGLP------ Site 1797
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -------IK- I MGIP------ Site 1797
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -------MK- I TGTP------ Site 1797
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -------VL- K VGNL------ Site 1797
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -------IE- Q LGTP------ Site 1797
Candida.albicans.IME2 -------LK- I LGTP------ Site 1797
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -------FD- I IGLP------ Site 1797
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -------FK- L FGTP------ Site 1797
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -------LR- L VGTP------ Site 1797
Kluyveromyces.lactis.IME2 -------LD- L LGSP------ Site 1797
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -------MM- V LGTP------ Site 1797
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -------IE- Q LGTP------ Site 1797
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -------ME- V VGTP------ Site 1797
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -------SEK K MSTP------ Site 1797
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -------ME- V VGTP------ Site 1797
Amphimedon.queenslandica.CDK1 -------FR- T LGTP------ Site 1797
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -------IR- T LGKL------ Site 1797
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -------FR- T LGTP------ Site 1797
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -------FK- E LGTP------ Site 1797
Neurospora.crassa.IME2 -------CE- I MGSP------ Site 1797
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -------FR- V LGTP------ Site 1797
Dictyostelium.discoideum.DYRK2..Probable.serine.th -------ME- V LGAP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -------FD- L IGLP------ Site 1797
Hydra.magnipapillata.CDK1 -------FR- V LGTP------ Site 1797
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -------VQ- L LGTP------ Site 1797
Ashbya.gossypii.IME2 -------LE- L LGTP------ Site 1797
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -------HA- I INPA------ Site 1797
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -------ME- L LGMP------ Site 1797
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -------IK- I LGTP------ Site 1797
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -------MN- V IPHP------ Site 1797
Schizosaccharomyces.pombe.b.IME2 -------CE- I LGNP------ Site 1797
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -------LG- I LGSP------ Site 1797
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom -------SQ- T QGLP------ Site 1797
Schizosaccharomyces.pombe.CDK1 -------FQ- V LGTP------ Site 1797
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -------ER- I LGPV------ Site 1797
Saccoglossus.kowalevskii.CDK1 -------FR- T MGTP------ Site 1797
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -------SEK K MSTP------ Site 1797
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -------IE- Q LGTP------ Site 1797
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -------FR- T LGTP------ Site 1797
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -------IRH H PGSLKPILKT Site 1797
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -------FR- M LGTP------ Site 1797
Yarrowia.lipolytica.IME2 -------VA- L LGTP------ Site 1797
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -------LE- V LGTP------ Site 1797
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -------FR- T LGTP------ Site 1797
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -------CC- I FGIK------ Site 1797
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -------IK- V LGTP------ Site 1797
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -------IK- I LGTP------ Site 1797
Species Residue at Site 2790
in 'msaprobs'
muscle

The residue for every species at site 2790 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -------VE- V LGMP------ Site 1797
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -------TD- L LGTP------ Site 1797
Scheffersomyces.stipitis.SKY1 -------IE- L IGPF------ Site 1797
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -------FR- L LGTP------ Site 1797

Generated by PhyloBot at 16:22, October 23rd 2019
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